RNA–Protein interactions for RNA: ENST00000517625.5

SKP1-203, Transcript of S-phase kinase associated protein 1, humanhuman

APPRIS P4 TSL 3 BASIC

Gene SKP1, Length 876 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1-203ENST00000517625 ZNF727A8MUV8 499 aa0.35□□□□□ -2.35
SKP1-203ENST00000517625 MFSD11O43934 449 aa0.35□□□□□ -2.35
SKP1-203ENST00000517625 MIR22HGQ0VDD5 57 aa0.35□□□□□ -2.35
SKP1-203ENST00000517625 MSMO1Q15800 293 aa0.35□□□□□ -2.35
SKP1-203ENST00000517625 C10orf111Q8N326 155 aa0.35□□□□□ -2.35
SKP1-203ENST00000517625 ISOC1Q96CN7 298 aa0.35□□□□□ -2.35
SKP1-203ENST00000517625 BIN3Q9NQY0 253 aa0.35□□□□□ -2.35
SKP1-203ENST00000517625 NUBP2Q9Y5Y2 271 aa0.35□□□□□ -2.35
SKP1-203ENST00000517625 ALPK3Q96L96 1907 aa0.34□□□□□ -2.35
SKP1-203ENST00000517625 NUP98P52948 1817 aa0.34□□□□□ -2.35
SKP1-203ENST00000517625 SNRNP200O75643 2136 aaKnown RBP0.34□□□□□ -2.35
SKP1-203ENST00000517625 LRP1Q07954 4544 aaKnown RBP0.34□□□□□ -2.35
SKP1-203ENST00000517625 ODAMA1E959 279 aa0.34□□□□□ -2.36
SKP1-203ENST00000517625 C5orf67F2Z3F1 127 aa0.34□□□□□ -2.36
SKP1-203ENST00000517625 K7ERJ3 54 aa0.34□□□□□ -2.36
SKP1-203ENST00000517625 CSN2P05814 226 aa0.34□□□□□ -2.36
SKP1-203ENST00000517625 CCL4P13236 92 aa0.34□□□□□ -2.36
SKP1-203ENST00000517625 BLMP54132 1417 aaPredicted RBP0.34□□□□□ -2.36
SKP1-203ENST00000517625 FXYD4P59646 89 aa0.34□□□□□ -2.36
SKP1-203ENST00000517625 Q6ZQY7 126 aa0.34□□□□□ -2.36
SKP1-203ENST00000517625 PRR15Q8IV56 129 aa0.34□□□□□ -2.36
SKP1-203ENST00000517625 LINC00269Q8N2A0 174 aa0.34□□□□□ -2.36
SKP1-203ENST00000517625 STX19Q8N4C7 294 aa0.34□□□□□ -2.36
SKP1-203ENST00000517625 EFCAB11Q9BUY7 163 aa0.34□□□□□ -2.36
SKP1-203ENST00000517625 IL20Q9NYY1 176 aa0.34□□□□□ -2.36
SKP1-203ENST00000517625 SS18L2Q9UHA2 77 aa0.34□□□□□ -2.36
SKP1-203ENST00000517625 KIAA1107Q9UPP5 1409 aa0.34□□□□□ -2.36
SKP1-203ENST00000517625 TPRKBQ9Y3C4 175 aa0.34□□□□□ -2.36
SKP1-203ENST00000517625 UFC1Q9Y3C8 167 aa0.34□□□□□ -2.36
SKP1-203ENST00000517625 MYH7BA7E2Y1 1941 aa0.34□□□□□ -2.36
SKP1-203ENST00000517625 FREM3P0C091 2139 aa0.34□□□□□ -2.36
SKP1-203ENST00000517625 ROCK1Q13464 1354 aa0.33□□□□□ -2.36
SKP1-203ENST00000517625 BCL9O00512 1426 aa0.33□□□□□ -2.36
SKP1-203ENST00000517625 UBR2Q8IWV8 1755 aa0.33□□□□□ -2.36
SKP1-203ENST00000517625 KIDINS220Q9ULH0 1771 aa0.33□□□□□ -2.36
SKP1-203ENST00000517625 KPNA4O00629 521 aaPredicted RBP0.33□□□□□ -2.36
SKP1-203ENST00000517625 IGHV3-30P01768 117 aa0.33□□□□□ -2.36
SKP1-203ENST00000517625 PRH1P02810 166 aa0.33□□□□□ -2.36
SKP1-203ENST00000517625 CD14P08571 375 aa0.33□□□□□ -2.36
SKP1-203ENST00000517625 IGHV3-30-5P0DP03 117 aa0.33□□□□□ -2.36
SKP1-203ENST00000517625 PDE6GP18545 87 aa0.33□□□□□ -2.36
SKP1-203ENST00000517625 DIAPH2-AS1Q14236 149 aa0.33□□□□□ -2.36
SKP1-203ENST00000517625 LTC4SQ16873 150 aa0.33□□□□□ -2.36
SKP1-203ENST00000517625 OCIAD2Q56VL3 154 aa0.33□□□□□ -2.36
SKP1-203ENST00000517625 OR4B1Q8NGF8 309 aa0.33□□□□□ -2.36
SKP1-203ENST00000517625 CCL4L1Q8NHW4 92 aa0.33□□□□□ -2.36
SKP1-203ENST00000517625 RMND5BQ96G75 393 aaPredicted RBP0.33□□□□□ -2.36
SKP1-203ENST00000517625 SMR3AQ99954 134 aa0.33□□□□□ -2.36
SKP1-203ENST00000517625 PHRF1Q9P1Y6 1649 aaKnown RBP0.33□□□□□ -2.36
SKP1-203ENST00000517625 SIP14410 1827 aa0.33□□□□□ -2.36
SKP1-203ENST00000517625 PLXNA4Q9HCM2 1894 aa0.33□□□□□ -2.36
SKP1-203ENST00000517625 DMDP11532 3685 aa0.33□□□□□ -2.36
SKP1-203ENST00000517625 MYO18AQ92614 2054 aaKnown RBP0.33□□□□□ -2.36
SKP1-203ENST00000517625 PRKDCP78527 4128 aaKnown RBP0.32□□□□□ -2.36
SKP1-203ENST00000517625 E5RI56 91 aa0.32□□□□□ -2.36
SKP1-203ENST00000517625 PPP5D1E7EU14 171 aa0.32□□□□□ -2.36
SKP1-203ENST00000517625 PFDN1O60925 122 aa0.32□□□□□ -2.36
SKP1-203ENST00000517625 ZNF137PP52743 207 aa0.32□□□□□ -2.36
SKP1-203ENST00000517625 SPINK7P58062 85 aa0.32□□□□□ -2.36
SKP1-203ENST00000517625 TAS2R41P59536 307 aa0.32□□□□□ -2.36
SKP1-203ENST00000517625 C10orf99Q6UWK7 81 aa0.32□□□□□ -2.36
SKP1-203ENST00000517625 SMIM20Q8N5G0 67 aa0.32□□□□□ -2.36
SKP1-203ENST00000517625 FAM24BQ8N5W8 94 aa0.32□□□□□ -2.36
SKP1-203ENST00000517625 DIRC1Q969H9 104 aa0.32□□□□□ -2.36
SKP1-203ENST00000517625 OR4C12Q96R67 309 aa0.32□□□□□ -2.36
SKP1-203ENST00000517625 KIAA0556O60303 1618 aa0.31□□□□□ -2.36
SKP1-203ENST00000517625 PKDREJQ9NTG1 2253 aa0.31□□□□□ -2.36
SKP1-203ENST00000517625 TRAPPC8Q9Y2L5 1435 aa0.31□□□□□ -2.36
SKP1-203ENST00000517625 HECTD4Q9Y4D8 3996 aa0.31□□□□□ -2.36
SKP1-203ENST00000517625 ABCA3Q99758 1704 aa0.31□□□□□ -2.36
SKP1-203ENST00000517625 FABP4P15090 132 aa0.31□□□□□ -2.36
SKP1-203ENST00000517625 SERPINB1P30740 379 aa0.31□□□□□ -2.36
SKP1-203ENST00000517625 VMA21Q3ZAQ7 101 aa0.31□□□□□ -2.36
SKP1-203ENST00000517625 C3orf33Q6P1S2 294 aa0.31□□□□□ -2.36
SKP1-203ENST00000517625 C5orf17Q8NAS9 161 aa0.31□□□□□ -2.36
SKP1-203ENST00000517625 BORCS8Q96FH0 119 aa0.31□□□□□ -2.36
SKP1-203ENST00000517625 LRTM1Q9HBL6 345 aa0.31□□□□□ -2.36
SKP1-203ENST00000517625 OTORQ9NRC9 128 aa0.31□□□□□ -2.36
SKP1-203ENST00000517625 MED11Q9P086 117 aa0.31□□□□□ -2.36
SKP1-203ENST00000517625 NAT8BQ9UHF3 227 aa0.31□□□□□ -2.36
SKP1-203ENST00000517625 ASCC3Q8N3C0 2202 aaKnown RBP0.31□□□□□ -2.36
SKP1-203ENST00000517625 MGAMO43451 1857 aa0.31□□□□□ -2.36
SKP1-203ENST00000517625 SPTBN1Q01082 2364 aaKnown RBP0.31□□□□□ -2.36
SKP1-203ENST00000517625 LRP2P98164 4655 aa0.31□□□□□ -2.36
SKP1-203ENST00000517625 MYLKQ15746 1914 aa0.3□□□□□ -2.36
SKP1-203ENST00000517625 PKHD1P08F94 4074 aa0.3□□□□□ -2.36
SKP1-203ENST00000517625 RALGAPBQ86X10 1494 aa0.3□□□□□ -2.36
SKP1-203ENST00000517625 TMEM238C9JI98 176 aa0.3□□□□□ -2.36
SKP1-203ENST00000517625 TRACP01848 142 aa0.3□□□□□ -2.36
SKP1-203ENST00000517625 MT-ND6P03923 174 aa0.3□□□□□ -2.36
SKP1-203ENST00000517625 GLRXP35754 106 aa0.3□□□□□ -2.36
SKP1-203ENST00000517625 MT4P47944 62 aa0.3□□□□□ -2.36
SKP1-203ENST00000517625 CCSMST1Q4G0I0 132 aa0.3□□□□□ -2.36
SKP1-203ENST00000517625 LAMTOR2Q9Y2Q5 125 aa0.3□□□□□ -2.36
SKP1-203ENST00000517625 STARD9Q9P2P6 4700 aa0.3□□□□□ -2.36
SKP1-203ENST00000517625 DOCK4Q8N1I0 1966 aa0.3□□□□□ -2.36
SKP1-203ENST00000517625 CUX1P39880 1505 aa0.29□□□□□ -2.36
SKP1-203ENST00000517625 KIAA0586Q9BVV6 1533 aa0.29□□□□□ -2.36
SKP1-203ENST00000517625 UNC13CQ8NB66 2214 aa0.29□□□□□ -2.36
SKP1-203ENST00000517625 MAP3K4Q9Y6R4 1608 aa0.29□□□□□ -2.36
Retrieved 100 of 20,778 RNA–protein pairs in 117.8 ms