RNA–Protein interactions for RNA: ENST00000514738.5

CDH6-205, Transcript of cadherin 6, humanhuman

TSL 1 (best) BASIC

Gene CDH6, Length 2,569 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH6-205ENST00000514738 TMEM30CPA0ZSE6 113 aa12.37□□□□□ -0.43
CDH6-205ENST00000514738 LMO7DNF2Z398 122 aa12.37□□□□□ -0.43
CDH6-205ENST00000514738 GP9P14770 177 aa12.37□□□□□ -0.43
CDH6-205ENST00000514738 WT1P19544 449 aaPredicted RBP12.37□□□□□ -0.43
CDH6-205ENST00000514738 FAM201AQ5SY85 155 aa12.37□□□□□ -0.43
CDH6-205ENST00000514738 MUSTN1Q8IVN3 82 aa12.37□□□□□ -0.43
CDH6-205ENST00000514738 C1orf158Q8N1D5 194 aa12.37□□□□□ -0.43
CDH6-205ENST00000514738 SCGB3A1Q96QR1 104 aa12.37□□□□□ -0.43
CDH6-205ENST00000514738 IGHV1OR15-9A0A0B4J2B8 117 aa12.37□□□□□ -0.43
CDH6-205ENST00000514738 LILRA5A6NI73 299 aa12.37□□□□□ -0.43
CDH6-205ENST00000514738 CCL4L1Q8NHW4 92 aa12.37□□□□□ -0.43
CDH6-205ENST00000514738 KLF14Q8TD94 323 aaPredicted RBP12.37□□□□□ -0.43
CDH6-205ENST00000514738 TMEM75Q8N9X5 138 aa12.36□□□□□ -0.43
CDH6-205ENST00000514738 UBE2E1P51965 193 aa12.36□□□□□ -0.43
CDH6-205ENST00000514738 CXCL17Q6UXB2 119 aa12.36□□□□□ -0.43
CDH6-205ENST00000514738 NUP37Q8NFH4 326 aa12.36□□□□□ -0.43
CDH6-205ENST00000514738 A0A087WVE0 104 aa12.35□□□□□ -0.43
CDH6-205ENST00000514738 FOXB1Q99853 325 aa12.35□□□□□ -0.43
CDH6-205ENST00000514738 TNRC6BQ9UPQ9 1833 aaKnown RBP12.35□□□□□ -0.43
CDH6-205ENST00000514738 BUB3O43684 328 aa12.35□□□□□ -0.43
CDH6-205ENST00000514738 TSPEAR-AS2P59090 65 aa12.35□□□□□ -0.43
CDH6-205ENST00000514738 PRCDQ00LT1 54 aa12.35□□□□□ -0.43
CDH6-205ENST00000514738 ZNF784Q8NCA9 323 aaPredicted RBP12.35□□□□□ -0.43
CDH6-205ENST00000514738 KLK15Q9H2R5 256 aa12.35□□□□□ -0.43
CDH6-205ENST00000514738 COL4A6Q14031 1691 aa12.35□□□□□ -0.43
CDH6-205ENST00000514738 IGHV3-15A0A0B4J1V0 119 aa12.34□□□□□ -0.43
CDH6-205ENST00000514738 ERCC8Q13216 396 aa12.34□□□□□ -0.43
CDH6-205ENST00000514738 C8orf49Q96NF6 230 aa12.34□□□□□ -0.43
CDH6-205ENST00000514738 IGKV1D-37A0A075B6S9 117 aa12.33□□□□□ -0.43
CDH6-205ENST00000514738 LYPD5Q6UWN5 251 aa12.33□□□□□ -0.43
CDH6-205ENST00000514738 SVILO95425 2214 aa12.33□□□□□ -0.44
CDH6-205ENST00000514738 ZNHIT1O43257 154 aa12.33□□□□□ -0.44
CDH6-205ENST00000514738 FREM1Q5H8C1 2179 aa12.33□□□□□ -0.44
CDH6-205ENST00000514738 PRB4P10163 310 aaPredicted RBP12.32□□□□□ -0.44
CDH6-205ENST00000514738 RPL39P5Q59GN2 51 aa12.32□□□□□ -0.44
CDH6-205ENST00000514738 FAM216BQ8N7L0 139 aa12.32□□□□□ -0.44
CDH6-205ENST00000514738 AMELXQ99217 191 aa12.32□□□□□ -0.44
CDH6-205ENST00000514738 IGKV3D-7A0A0C4DH55 119 aa12.32□□□□□ -0.44
CDH6-205ENST00000514738 PRSS38A1L453 326 aa12.32□□□□□ -0.44
CDH6-205ENST00000514738 M0R3E3 92 aa12.32□□□□□ -0.44
CDH6-205ENST00000514738 SH2D1AO60880 128 aa12.32□□□□□ -0.44
CDH6-205ENST00000514738 IGHG2P01859 326 aa12.32□□□□□ -0.44
CDH6-205ENST00000514738 MRPS36P82909 103 aaKnown RBP12.32□□□□□ -0.44
CDH6-205ENST00000514738 C20orf197Q8N268 126 aa12.32□□□□□ -0.44
CDH6-205ENST00000514738 DAND5Q8N907 189 aa12.32□□□□□ -0.44
CDH6-205ENST00000514738 PSPNO60542 156 aa12.31□□□□□ -0.44
CDH6-205ENST00000514738 LIFP15018 202 aa12.31□□□□□ -0.44
CDH6-205ENST00000514738 Q6ZRU5 148 aa12.31□□□□□ -0.44
CDH6-205ENST00000514738 H7BZZ5 65 aa12.31□□□□□ -0.44
CDH6-205ENST00000514738 XCL1P47992 114 aa12.31□□□□□ -0.44
CDH6-205ENST00000514738 XCL2Q9UBD3 114 aa12.31□□□□□ -0.44
CDH6-205ENST00000514738 POLEQ07864 2286 aa12.31□□□□□ -0.44
CDH6-205ENST00000514738 PRR14LQ5THK1 2151 aa12.31□□□□□ -0.44
CDH6-205ENST00000514738 RANBP2P49792 3224 aaKnown RBP12.31□□□□□ -0.44
CDH6-205ENST00000514738 TIMM17BO60830 172 aa12.3□□□□□ -0.44
CDH6-205ENST00000514738 IGHV3-48P01763 117 aa12.3□□□□□ -0.44
CDH6-205ENST00000514738 DYNAPQ8N1N2 210 aa12.3□□□□□ -0.44
CDH6-205ENST00000514738 TOMM6Q96B49 74 aa12.3□□□□□ -0.44
CDH6-205ENST00000514738 UNC80Q8N2C7 3258 aa12.3□□□□□ -0.44
CDH6-205ENST00000514738 NACAE9PAV3 2078 aa12.3□□□□□ -0.44
CDH6-205ENST00000514738 IGKV3D-11A0A0A0MRZ8 115 aa12.3□□□□□ -0.44
CDH6-205ENST00000514738 SNRPD3P62318 126 aaKnown RBP12.3□□□□□ -0.44
CDH6-205ENST00000514738 PMS2CLQ68D20 193 aa12.3□□□□□ -0.44
CDH6-205ENST00000514738 PRR15Q8IV56 129 aa12.3□□□□□ -0.44
CDH6-205ENST00000514738 C11orf86A6NJI1 115 aa12.29□□□□□ -0.44
CDH6-205ENST00000514738 J3QT63 122 aa12.29□□□□□ -0.44
CDH6-205ENST00000514738 COPS9Q8WXC6 57 aa12.29□□□□□ -0.44
CDH6-205ENST00000514738 TNCP24821 2201 aa12.29□□□□□ -0.44
CDH6-205ENST00000514738 VCANP13611 3396 aa12.29□□□□□ -0.44
CDH6-205ENST00000514738 PATE1Q8WXA2 126 aa12.29□□□□□ -0.44
CDH6-205ENST00000514738 U3KQE9 123 aa12.29□□□□□ -0.44
CDH6-205ENST00000514738 RBMY1BA6NDE4 496 aaKnown RBP12.28□□□□□ -0.44
CDH6-205ENST00000514738 RBMY1EA6NEQ0 496 aaKnown RBP12.28□□□□□ -0.44
CDH6-205ENST00000514738 PAX4O43316 350 aa12.28□□□□□ -0.44
CDH6-205ENST00000514738 RBMY1DP0C7P1 496 aaKnown RBP12.28□□□□□ -0.44
CDH6-205ENST00000514738 RBMY1A1P0DJD3 496 aaKnown RBP12.28□□□□□ -0.44
CDH6-205ENST00000514738 RBMY1CP0DJD4 496 aa12.28□□□□□ -0.44
CDH6-205ENST00000514738 LOXP28300 417 aaPredicted RBP12.28□□□□□ -0.44
CDH6-205ENST00000514738 RBMY1FQ15415 496 aaKnown RBP12.28□□□□□ -0.44
CDH6-205ENST00000514738 RNF7Q9UBF6 113 aa12.28□□□□□ -0.44
CDH6-205ENST00000514738 ZGRF1Q86YA3 2104 aa12.28□□□□□ -0.44
CDH6-205ENST00000514738 IGHV3OR16-10A0A075B7F0 116 aa12.28□□□□□ -0.44
CDH6-205ENST00000514738 THAP8Q8NA92 274 aa12.28□□□□□ -0.44
CDH6-205ENST00000514738 DAZ2Q13117 558 aaKnown RBP12.27□□□□□ -0.44
CDH6-205ENST00000514738 DAZ3Q9NR90 486 aaKnown RBP12.27□□□□□ -0.44
CDH6-205ENST00000514738 I3L3M4 83 aa12.27□□□□□ -0.45
CDH6-205ENST00000514738 CCKP06307 115 aa12.27□□□□□ -0.45
CDH6-205ENST00000514738 Q6JHZ5 121 aa12.27□□□□□ -0.45
CDH6-205ENST00000514738 ZNF491Q8N8L2 437 aa12.27□□□□□ -0.45
CDH6-205ENST00000514738 FANCD2OSQ96PS1 177 aa12.27□□□□□ -0.45
CDH6-205ENST00000514738 TRBV7-6A0A0J9YX20 115 aa12.26□□□□□ -0.45
CDH6-205ENST00000514738 EGR2P11161 476 aaPredicted RBP12.26□□□□□ -0.45
CDH6-205ENST00000514738 LGALS3P17931 250 aaKnown RBP12.26□□□□□ -0.45
CDH6-205ENST00000514738 HOXA4Q00056 320 aaPredicted RBP12.26□□□□□ -0.45
CDH6-205ENST00000514738 IGHV4-34P06331 123 aa12.26□□□□□ -0.45
CDH6-205ENST00000514738 Q8IYB0 196 aa12.26□□□□□ -0.45
CDH6-205ENST00000514738 CNFNQ9BYD5 112 aa12.26□□□□□ -0.45
CDH6-205ENST00000514738 GHRHP01286 108 aa12.25□□□□□ -0.45
CDH6-205ENST00000514738 SAA4P35542 130 aa12.25□□□□□ -0.45
CDH6-205ENST00000514738 PAPPA-AS1Q5QFB9 102 aa12.25□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 95.8 ms