RNA–Protein interactions for RNA: ENST00000512617.6

PVT1-202, Transcript of Pvt1 oncogene, humanhuman

TSL 3

Gene PVT1, Length 383 nt, Biotype lincRNA, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVT1-202ENST00000512617 CHD8Q9HCK8 2581 aa2.23□□□□□ -2.05
PVT1-202ENST00000512617 PTPRZ1P23471 2315 aaPredicted RBP2.23□□□□□ -2.05
PVT1-202ENST00000512617 ZNF292O60281 2723 aa2.23□□□□□ -2.05
PVT1-202ENST00000512617 MDFIC2A0A1B0GVS7 189 aa2.23□□□□□ -2.05
PVT1-202ENST00000512617 SMIM31A0A1B0GVY4 71 aa2.23□□□□□ -2.05
PVT1-202ENST00000512617 A0A1W2PQD3 144 aa2.23□□□□□ -2.05
PVT1-202ENST00000512617 A0A1W2PRS3 328 aa2.23□□□□□ -2.05
PVT1-202ENST00000512617 MCRIP1C9JLW8 97 aa2.23□□□□□ -2.05
PVT1-202ENST00000512617 ZNF432O94892 652 aa2.23□□□□□ -2.05
PVT1-202ENST00000512617 CD3DP04234 171 aa2.23□□□□□ -2.05
PVT1-202ENST00000512617 LINC00032P0C843 101 aa2.23□□□□□ -2.05
PVT1-202ENST00000512617 NFYAP23511 347 aaPredicted RBP2.23□□□□□ -2.05
PVT1-202ENST00000512617 FUSP35637 526 aaKnown RBP eCLIP2.23□□□□□ -2.05
PVT1-202ENST00000512617 MPV17P39210 176 aa2.23□□□□□ -2.05
PVT1-202ENST00000512617 CRIP2P52943 208 aaPredicted RBP2.23□□□□□ -2.05
PVT1-202ENST00000512617 SUPT4H1P63272 117 aaKnown RBP2.23□□□□□ -2.05
PVT1-202ENST00000512617 EBI3Q14213 229 aa2.23□□□□□ -2.05
PVT1-202ENST00000512617 KRTAP15-1Q3LI76 137 aa2.23□□□□□ -2.05
PVT1-202ENST00000512617 Q6AWC8 147 aa2.23□□□□□ -2.05
PVT1-202ENST00000512617 PATE2Q6UY27 113 aa2.23□□□□□ -2.05
PVT1-202ENST00000512617 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP2.23□□□□□ -2.05
PVT1-202ENST00000512617 VOPP1Q96AW1 172 aa2.23□□□□□ -2.05
PVT1-202ENST00000512617 CHCHD1Q96BP2 118 aaKnown RBP2.23□□□□□ -2.05
PVT1-202ENST00000512617 IMMP1LQ96LU5 166 aa2.23□□□□□ -2.05
PVT1-202ENST00000512617 AQP10Q96PS8 301 aa2.23□□□□□ -2.05
PVT1-202ENST00000512617 IMMP2LQ96T52 175 aa2.23□□□□□ -2.05
PVT1-202ENST00000512617 LINC00574Q9H8X3 128 aa2.23□□□□□ -2.05
PVT1-202ENST00000512617 CEP250Q9BV73 2442 aa2.23□□□□□ -2.05
PVT1-202ENST00000512617 GON4LQ3T8J9 2241 aa2.23□□□□□ -2.05
PVT1-202ENST00000512617 MYOFQ9NZM1 2061 aa2.22□□□□□ -2.05
PVT1-202ENST00000512617 NUP205Q92621 2012 aa2.22□□□□□ -2.05
PVT1-202ENST00000512617 TRGV5A0A0B4J1U4 118 aa2.22□□□□□ -2.05
PVT1-202ENST00000512617 LOC107986453A0A1B0GWG9 222 aa2.22□□□□□ -2.05
PVT1-202ENST00000512617 FAM168BA1KXE4 195 aa2.22□□□□□ -2.05
PVT1-202ENST00000512617 ZNF736B4DX44 427 aaPredicted RBP2.22□□□□□ -2.05
PVT1-202ENST00000512617 TMEM262E9PQX1 116 aa2.22□□□□□ -2.05
PVT1-202ENST00000512617 LYRM1O43325 122 aa2.22□□□□□ -2.05
PVT1-202ENST00000512617 TIMM17BO60830 172 aa2.22□□□□□ -2.05
PVT1-202ENST00000512617 HYPMO75409 117 aa2.22□□□□□ -2.05
PVT1-202ENST00000512617 SAA1P0DJI8 122 aaPredicted RBP2.22□□□□□ -2.05
PVT1-202ENST00000512617 CRYGAP11844 174 aa2.22□□□□□ -2.05
PVT1-202ENST00000512617 SLC25A4P12235 298 aa2.22□□□□□ -2.05
PVT1-202ENST00000512617 FABP4P15090 132 aa2.22□□□□□ -2.05
PVT1-202ENST00000512617 RPL28P46779 137 aaKnown RBP2.22□□□□□ -2.05
PVT1-202ENST00000512617 RPS10P46783 165 aaKnown RBP2.22□□□□□ -2.05
PVT1-202ENST00000512617 XCL1P47992 114 aa2.22□□□□□ -2.05
PVT1-202ENST00000512617 CIRBPQ14011 172 aaKnown RBP2.22□□□□□ -2.05
PVT1-202ENST00000512617 C2orf83Q53S99 150 aa2.22□□□□□ -2.05
PVT1-202ENST00000512617 ZC2HC1BQ5TFG8 222 aa2.22□□□□□ -2.05
PVT1-202ENST00000512617 ZNF660Q6AZW8 331 aaPredicted RBP2.22□□□□□ -2.05
PVT1-202ENST00000512617 OR2T2Q6IF00 324 aa2.22□□□□□ -2.05
PVT1-202ENST00000512617 C2orf91Q6ZV80 131 aa2.22□□□□□ -2.05
PVT1-202ENST00000512617 OR5AS1Q8N127 324 aa2.22□□□□□ -2.05
PVT1-202ENST00000512617 BCL2L10Q9HD36 194 aa2.22□□□□□ -2.05
PVT1-202ENST00000512617 TAS2R4Q9NYW5 299 aa2.22□□□□□ -2.05
PVT1-202ENST00000512617 RPL26L1Q9UNX3 145 aaKnown RBP2.22□□□□□ -2.05
PVT1-202ENST00000512617 LAMA1P25391 3075 aa2.22□□□□□ -2.05
PVT1-202ENST00000512617 ATG2BQ96BY7 2078 aa2.22□□□□□ -2.05
PVT1-202ENST00000512617 SPAG17Q6Q759 2223 aa2.22□□□□□ -2.05
PVT1-202ENST00000512617 NYNRINQ9P2P1 1898 aaKnown RBP2.22□□□□□ -2.05
PVT1-202ENST00000512617 ABCA7Q8IZY2 2146 aa2.21□□□□□ -2.06
PVT1-202ENST00000512617 WDFY3Q8IZQ1 3526 aa2.21□□□□□ -2.06
PVT1-202ENST00000512617 NCOR2Q9Y618 2525 aa2.21□□□□□ -2.06
PVT1-202ENST00000512617 IGLV3-9A0A075B6K5 115 aa2.21□□□□□ -2.06
PVT1-202ENST00000512617 IGKV1OR2-108A0A075B7D4 117 aa2.21□□□□□ -2.06
PVT1-202ENST00000512617 C7orf66A4D0T2 115 aa2.21□□□□□ -2.06
PVT1-202ENST00000512617 PINLYPA6NC86 204 aa2.21□□□□□ -2.06
PVT1-202ENST00000512617 FAM24AA6NFZ4 105 aa2.21□□□□□ -2.06
PVT1-202ENST00000512617 M0R2P5 195 aa2.21□□□□□ -2.06
PVT1-202ENST00000512617 LHBP01229 141 aa2.21□□□□□ -2.06
PVT1-202ENST00000512617 CD24P25063 80 aa2.21□□□□□ -2.06
PVT1-202ENST00000512617 CKS2P33552 79 aa2.21□□□□□ -2.06
PVT1-202ENST00000512617 NANOS3P60323 173 aaKnown RBP2.21□□□□□ -2.06
PVT1-202ENST00000512617 IGLV3-21P80748 117 aaPredicted RBP2.21□□□□□ -2.06
PVT1-202ENST00000512617 SS18Q15532 418 aa2.21□□□□□ -2.06
PVT1-202ENST00000512617 C15orf32Q32M92 178 aa2.21□□□□□ -2.06
PVT1-202ENST00000512617 GFI1BQ5VTD9 330 aa2.21□□□□□ -2.06
PVT1-202ENST00000512617 MIC13Q5XKP0 118 aa2.21□□□□□ -2.06
PVT1-202ENST00000512617 DEFB106AQ8N104 65 aa2.21□□□□□ -2.06
PVT1-202ENST00000512617 DEFB119Q8N690 84 aa2.21□□□□□ -2.06
PVT1-202ENST00000512617 DEFB124Q8NES8 71 aa2.21□□□□□ -2.06
PVT1-202ENST00000512617 OTOSQ8NHW6 89 aa2.21□□□□□ -2.06
PVT1-202ENST00000512617 AQP3Q92482 292 aa2.21□□□□□ -2.06
PVT1-202ENST00000512617 MRPS24Q96EL2 167 aaKnown RBP2.21□□□□□ -2.06
PVT1-202ENST00000512617 ATG5Q9H1Y0 275 aa2.21□□□□□ -2.06
PVT1-202ENST00000512617 NHP2Q9NX24 153 aaKnown RBP2.21□□□□□ -2.06
PVT1-202ENST00000512617 BET1LQ9NYM9 111 aa2.21□□□□□ -2.06
PVT1-202ENST00000512617 TPRKBQ9Y3C4 175 aa2.21□□□□□ -2.06
PVT1-202ENST00000512617 TIMM9Q9Y5J7 89 aa2.21□□□□□ -2.06
PVT1-202ENST00000512617 ASPMQ8IZT6 3477 aa2.21□□□□□ -2.06
PVT1-202ENST00000512617 THADAQ6YHU6 1953 aa2.21□□□□□ -2.06
PVT1-202ENST00000512617 COL5A1P20908 1838 aaPredicted RBP2.21□□□□□ -2.06
PVT1-202ENST00000512617 MYO18AQ92614 2054 aaKnown RBP2.21□□□□□ -2.06
PVT1-202ENST00000512617 CACNA1BQ00975 2339 aa2.2□□□□□ -2.06
PVT1-202ENST00000512617 KMT2BQ9UMN6 2715 aaPredicted RBP2.2□□□□□ -2.06
PVT1-202ENST00000512617 SPTBN4Q9H254 2564 aa2.2□□□□□ -2.06
PVT1-202ENST00000512617 TRBV6-6A0A0A6YYG2 114 aa2.2□□□□□ -2.06
PVT1-202ENST00000512617 IGHV3-15A0A0B4J1V0 119 aa2.2□□□□□ -2.06
PVT1-202ENST00000512617 CXorf51AA0A1B0GTR3 108 aa2.2□□□□□ -2.06
PVT1-202ENST00000512617 A8MUU9 505 aa2.2□□□□□ -2.06
Retrieved 100 of 20,778 RNA–protein pairs in 52.3 ms