RNA–Protein interactions for RNA: ENST00000505010.5

TPM3-218, Transcript of tropomyosin 3, humanhuman

TSL 2

Gene TPM3, Length 540 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-218ENST00000505010 FAM3BP58499 235 aaPredicted RBP6.89□□□□□ -1.31
TPM3-218ENST00000505010 ELOBQ15370 118 aa6.89□□□□□ -1.31
TPM3-218ENST00000505010 GFI1BQ5VTD9 330 aa6.89□□□□□ -1.31
TPM3-218ENST00000505010 TRPT1Q86TN4 253 aaKnown RBP6.89□□□□□ -1.31
TPM3-218ENST00000505010 TSKUQ8WUA8 353 aa6.89□□□□□ -1.31
TPM3-218ENST00000505010 FAM110AQ9BQ89 295 aa6.89□□□□□ -1.31
TPM3-218ENST00000505010 KRTAP17-1Q9BYP8 105 aa6.89□□□□□ -1.31
TPM3-218ENST00000505010 SMIM27A0A1W2PRY6 76 aa6.88□□□□□ -1.31
TPM3-218ENST00000505010 C3orf84H3BNL1 204 aa6.88□□□□□ -1.31
TPM3-218ENST00000505010 CXCL1P09341 107 aa6.88□□□□□ -1.31
TPM3-218ENST00000505010 RPL35AP18077 110 aaKnown RBP6.88□□□□□ -1.31
TPM3-218ENST00000505010 RPS20P60866 119 aaKnown RBP6.88□□□□□ -1.31
TPM3-218ENST00000505010 LINC01559Q495D7 138 aa6.88□□□□□ -1.31
TPM3-218ENST00000505010 MUC21Q5SSG8 566 aa6.88□□□□□ -1.31
TPM3-218ENST00000505010 Q6AWC8 147 aa6.88□□□□□ -1.31
TPM3-218ENST00000505010 Q6ZQT7 251 aa6.88□□□□□ -1.31
TPM3-218ENST00000505010 YPEL4Q96NS1 127 aa6.88□□□□□ -1.31
TPM3-218ENST00000505010 NEU1Q99519 415 aa6.88□□□□□ -1.31
TPM3-218ENST00000505010 B9D2Q9BPU9 175 aa6.88□□□□□ -1.31
TPM3-218ENST00000505010 C19orf73Q9NVV2 129 aa6.88□□□□□ -1.31
TPM3-218ENST00000505010 C11orf21Q9P2W6 132 aa6.88□□□□□ -1.31
TPM3-218ENST00000505010 XKRY2A2RUG3 117 aa6.87□□□□□ -1.31
TPM3-218ENST00000505010 GRIFINA4D1Z8 144 aa6.87□□□□□ -1.31
TPM3-218ENST00000505010 COLCA2A8K830 154 aa6.87□□□□□ -1.31
TPM3-218ENST00000505010 HIGD1CA8MV81 97 aa6.87□□□□□ -1.31
TPM3-218ENST00000505010 SPINK4O60575 86 aa6.87□□□□□ -1.31
TPM3-218ENST00000505010 INSP01308 110 aa6.87□□□□□ -1.31
TPM3-218ENST00000505010 DEFB125Q8N687 156 aa6.87□□□□□ -1.31
TPM3-218ENST00000505010 GTSF1Q8WW33 167 aa6.87□□□□□ -1.31
TPM3-218ENST00000505010 FAM210BQ96KR6 192 aa6.87□□□□□ -1.31
TPM3-218ENST00000505010 PGLYRP4Q96LB8 373 aa6.87□□□□□ -1.31
TPM3-218ENST00000505010 CLUHP3Q96NS8 147 aa6.87□□□□□ -1.31
TPM3-218ENST00000505010 TPPP3Q9BW30 176 aa6.87□□□□□ -1.31
TPM3-218ENST00000505010 GFRA4Q9GZZ7 299 aa6.87□□□□□ -1.31
TPM3-218ENST00000505010 NAT8BQ9UHF3 227 aa6.87□□□□□ -1.31
TPM3-218ENST00000505010 TENM2Q9NT68 2774 aa6.86□□□□□ -1.31
TPM3-218ENST00000505010 TRBV24-1A0A075B6N3 115 aa6.86□□□□□ -1.31
TPM3-218ENST00000505010 TRAV9-1A0A075B6T8 112 aa6.86□□□□□ -1.31
TPM3-218ENST00000505010 IGKV3D-20A0A0C4DH25 116 aa6.86□□□□□ -1.31
TPM3-218ENST00000505010 AMBPP02760 352 aa6.86□□□□□ -1.31
TPM3-218ENST00000505010 ANXA2RQ3ZCQ2 193 aa6.86□□□□□ -1.31
TPM3-218ENST00000505010 MRPL54Q6P161 138 aaKnown RBP6.86□□□□□ -1.31
TPM3-218ENST00000505010 NUP35Q8NFH5 326 aa6.86□□□□□ -1.31
TPM3-218ENST00000505010 BTF3L4Q96K17 158 aa6.86□□□□□ -1.31
TPM3-218ENST00000505010 SRD5A3Q9H8P0 318 aa6.86□□□□□ -1.31
TPM3-218ENST00000505010 FAM231BA6NCW3 169 aa6.85□□□□□ -1.31
TPM3-218ENST00000505010 CRXO43186 299 aaPredicted RBP6.85□□□□□ -1.31
TPM3-218ENST00000505010 RAB5AP20339 215 aa6.85□□□□□ -1.31
TPM3-218ENST00000505010 NUTF2P61970 127 aaKnown RBP6.85□□□□□ -1.31
TPM3-218ENST00000505010 FAM159AQ6UWV7 190 aa6.85□□□□□ -1.31
TPM3-218ENST00000505010 FER1L6-AS1Q8NA97 138 aa6.85□□□□□ -1.31
TPM3-218ENST00000505010 BORCS7Q96B45 105 aa6.85□□□□□ -1.31
TPM3-218ENST00000505010 PYGO2Q9BRQ0 406 aa6.85□□□□□ -1.31
TPM3-218ENST00000505010 XCL2Q9UBD3 114 aa6.85□□□□□ -1.31
TPM3-218ENST00000505010 TIMM8BQ9Y5J9 83 aaPredicted RBP6.85□□□□□ -1.31
TPM3-218ENST00000505010 IGHV1OR15-1A0A075B7D0 117 aa6.84□□□□□ -1.31
TPM3-218ENST00000505010 H3BVH4 76 aa6.84□□□□□ -1.31
TPM3-218ENST00000505010 TYMSP04818 313 aa6.84□□□□□ -1.31
TPM3-218ENST00000505010 IGLC6P0CF74 106 aa6.84□□□□□ -1.31
TPM3-218ENST00000505010 NHLRC4P0CG21 123 aaPredicted RBP6.84□□□□□ -1.31
TPM3-218ENST00000505010 RBMY1A1P0DJD3 496 aaKnown RBP6.84□□□□□ -1.31
TPM3-218ENST00000505010 RBMY1CP0DJD4 496 aa6.84□□□□□ -1.31
TPM3-218ENST00000505010 CTRLP40313 264 aa6.84□□□□□ -1.31
TPM3-218ENST00000505010 ASIPP42127 132 aa6.84□□□□□ -1.31
TPM3-218ENST00000505010 RPS10P46783 165 aaKnown RBP6.84□□□□□ -1.31
TPM3-218ENST00000505010 RBMY1FQ15415 496 aaKnown RBP6.84□□□□□ -1.31
TPM3-218ENST00000505010 MORN3Q6PF18 240 aaPredicted RBP6.84□□□□□ -1.31
TPM3-218ENST00000505010 KCNS1Q96KK3 526 aa6.84□□□□□ -1.31
TPM3-218ENST00000505010 TMEM208Q9BTX3 173 aa6.84□□□□□ -1.31
TPM3-218ENST00000505010 U3KQK5 164 aa6.84□□□□□ -1.31
TPM3-218ENST00000505010 MUC21A0A0G2JKD1 596 aa6.83□□□□□ -1.32
TPM3-218ENST00000505010 MUC21A0A140T8X8 626 aa6.83□□□□□ -1.32
TPM3-218ENST00000505010 ZNF324O75467 553 aaPredicted RBP6.83□□□□□ -1.32
TPM3-218ENST00000505010 ARMS2P0C7Q2 107 aa6.83□□□□□ -1.32
TPM3-218ENST00000505010 S100A4P26447 101 aaKnown RBP6.83□□□□□ -1.32
TPM3-218ENST00000505010 KRTAP10-11P60412 298 aa6.83□□□□□ -1.32
TPM3-218ENST00000505010 RAB4BP61018 213 aa6.83□□□□□ -1.32
TPM3-218ENST00000505010 SSTP61278 116 aa6.83□□□□□ -1.32
TPM3-218ENST00000505010 LYZL1Q6UWQ5 148 aa6.83□□□□□ -1.32
TPM3-218ENST00000505010 Q8N1Y9 231 aa6.83□□□□□ -1.32
TPM3-218ENST00000505010 LINC01587Q99440 93 aa6.83□□□□□ -1.32
TPM3-218ENST00000505010 C20orf144Q9BQM9 153 aa6.83□□□□□ -1.32
TPM3-218ENST00000505010 ZMAT5Q9UDW3 170 aaKnown RBP6.83□□□□□ -1.32
TPM3-218ENST00000505010 DNAH7Q8WXX0 4024 aa6.83□□□□□ -1.32
TPM3-218ENST00000505010 TRGV11A0A075B6L2 103 aa6.82□□□□□ -1.32
TPM3-218ENST00000505010 IGHV3OR16-12A0A075B7B8 117 aa6.82□□□□□ -1.32
TPM3-218ENST00000505010 A0A1B0GUT8 65 aa6.82□□□□□ -1.32
TPM3-218ENST00000505010 CBY3A6NI87 242 aa6.82□□□□□ -1.32
TPM3-218ENST00000505010 GNRH2O43555 120 aa6.82□□□□□ -1.32
TPM3-218ENST00000505010 FRMD6-AS1P0C7T7 363 aa6.82□□□□□ -1.32
TPM3-218ENST00000505010 HTN1P15515 57 aa6.82□□□□□ -1.32
TPM3-218ENST00000505010 CAMPP49913 170 aa6.82□□□□□ -1.32
TPM3-218ENST00000505010 EGFEM1PQ0D2K5 195 aa6.82□□□□□ -1.32
TPM3-218ENST00000505010 RIGQ13278 110 aa6.82□□□□□ -1.32
TPM3-218ENST00000505010 CASC10Q5T4H9 136 aa6.82□□□□□ -1.32
TPM3-218ENST00000505010 ATP5L2Q7Z4Y8 100 aa6.82□□□□□ -1.32
TPM3-218ENST00000505010 C1QTNF4Q9BXJ3 329 aa6.82□□□□□ -1.32
TPM3-218ENST00000505010 TP53TG3Q9ULZ0 132 aa6.82□□□□□ -1.32
TPM3-218ENST00000505010 TMA7Q9Y2S6 64 aaKnown RBP6.82□□□□□ -1.32
TPM3-218ENST00000505010 GOLT1BQ9Y3E0 138 aa6.82□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 66.7 ms