RNA–Protein interactions for RNA: ENST00000504430.5

NIPBL-204, Transcript of NIPBL, cohesin loading factor, humanhuman

TSL 2

Gene NIPBL, Length 3,455 nt, Biotype processed transcript, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPBL-204ENST00000504430 AHDC1Q5TGY3 1603 aaPredicted RBP3.29□□□□□ -1.88
NIPBL-204ENST00000504430 MED12LQ86YW9 2145 aa3.29□□□□□ -1.88
NIPBL-204ENST00000504430 CPAMD8Q8IZJ3 1885 aa3.29□□□□□ -1.88
NIPBL-204ENST00000504430 LSM3P62310 102 aaKnown RBP3.29□□□□□ -1.88
NIPBL-204ENST00000504430 C5orf38Q86SI9 138 aa3.29□□□□□ -1.88
NIPBL-204ENST00000504430 OR10AG1Q8NH19 301 aa3.29□□□□□ -1.88
NIPBL-204ENST00000504430 CYTL1Q9NRR1 136 aa3.29□□□□□ -1.88
NIPBL-204ENST00000504430 HIGD1BQ9P298 99 aa3.29□□□□□ -1.88
NIPBL-204ENST00000504430 LY96Q9Y6Y9 160 aa3.29□□□□□ -1.88
NIPBL-204ENST00000504430 ZC3H13Q5T200 1668 aaKnown RBP3.29□□□□□ -1.88
NIPBL-204ENST00000504430 ADCYAP1P18509 176 aa3.29□□□□□ -1.88
NIPBL-204ENST00000504430 DAPK1P53355 1430 aa3.29□□□□□ -1.88
NIPBL-204ENST00000504430 IGKV3-11P04433 115 aa3.28□□□□□ -1.88
NIPBL-204ENST00000504430 SEC11AP67812 179 aa3.28□□□□□ -1.88
NIPBL-204ENST00000504430 KRTAP25-1Q3LHN0 102 aa3.28□□□□□ -1.88
NIPBL-204ENST00000504430 BVES-AS1Q5T3Y7 98 aa3.28□□□□□ -1.88
NIPBL-204ENST00000504430 DOCK11Q5JSL3 2073 aa3.28□□□□□ -1.88
NIPBL-204ENST00000504430 KIF20BQ96Q89 1820 aa3.28□□□□□ -1.88
NIPBL-204ENST00000504430 TRBV10-2A0A0K0K1G8 114 aa3.28□□□□□ -1.88
NIPBL-204ENST00000504430 MUC21A0A140T8X8 626 aa3.28□□□□□ -1.88
NIPBL-204ENST00000504430 hDV103S1A0JD37 113 aa3.28□□□□□ -1.88
NIPBL-204ENST00000504430 ABCA4P78363 2273 aa3.28□□□□□ -1.88
NIPBL-204ENST00000504430 MSMBP08118 114 aa3.28□□□□□ -1.88
NIPBL-204ENST00000504430 ASIPP42127 132 aa3.28□□□□□ -1.88
NIPBL-204ENST00000504430 ADIRFQ15847 76 aa3.28□□□□□ -1.88
NIPBL-204ENST00000504430 DEFB113Q30KQ7 82 aa3.28□□□□□ -1.88
NIPBL-204ENST00000504430 CASP8AP2Q9UKL3 1982 aa3.28□□□□□ -1.89
NIPBL-204ENST00000504430 SHANK1Q9Y566 2161 aa3.28□□□□□ -1.89
NIPBL-204ENST00000504430 H3BUT2 72 aa3.27□□□□□ -1.89
NIPBL-204ENST00000504430 SIX6O95475 246 aa3.27□□□□□ -1.89
NIPBL-204ENST00000504430 LGALSLQ3ZCW2 172 aaPredicted RBP3.27□□□□□ -1.89
NIPBL-204ENST00000504430 ST20Q9HBF5 79 aa3.27□□□□□ -1.89
NIPBL-204ENST00000504430 TCHHQ07283 1943 aa3.27□□□□□ -1.89
NIPBL-204ENST00000504430 SSSCA1O60232 199 aa3.27□□□□□ -1.89
NIPBL-204ENST00000504430 ZNF79Q15937 498 aa3.27□□□□□ -1.89
NIPBL-204ENST00000504430 CMTM2Q8TAZ6 248 aa3.27□□□□□ -1.89
NIPBL-204ENST00000504430 ZGRF1Q86YA3 2104 aa3.27□□□□□ -1.89
NIPBL-204ENST00000504430 PTPRDP23468 1912 aa3.27□□□□□ -1.89
NIPBL-204ENST00000504430 IGKV3D-11A0A0A0MRZ8 115 aa3.27□□□□□ -1.89
NIPBL-204ENST00000504430 A0A1W2PPM0 123 aa3.27□□□□□ -1.89
NIPBL-204ENST00000504430 POLR2JP52435 117 aaKnown RBP3.27□□□□□ -1.89
NIPBL-204ENST00000504430 Q5W150 140 aa3.27□□□□□ -1.89
NIPBL-204ENST00000504430 LYPD5Q6UWN5 251 aa3.27□□□□□ -1.89
NIPBL-204ENST00000504430 SPANXA2-OT1Q8N9U9 137 aa3.27□□□□□ -1.89
NIPBL-204ENST00000504430 SMIM7Q9BQ49 75 aa3.27□□□□□ -1.89
NIPBL-204ENST00000504430 GFRA4Q9GZZ7 299 aa3.27□□□□□ -1.89
NIPBL-204ENST00000504430 MADDQ8WXG6 1647 aa3.26□□□□□ -1.89
NIPBL-204ENST00000504430 H3BPC8 53 aa3.26□□□□□ -1.89
NIPBL-204ENST00000504430 TRAPPC1Q9Y5R8 145 aa3.26□□□□□ -1.89
NIPBL-204ENST00000504430 COL1A2P08123 1366 aa3.26□□□□□ -1.89
NIPBL-204ENST00000504430 ASAH2BP0C7U1 165 aa3.26□□□□□ -1.89
NIPBL-204ENST00000504430 BPESC1Q9GZL8 116 aa3.26□□□□□ -1.89
NIPBL-204ENST00000504430 ABCA10Q8WWZ4 1543 aa3.26□□□□□ -1.89
NIPBL-204ENST00000504430 MUC22E2RYF6 1773 aaPredicted RBP3.25□□□□□ -1.89
NIPBL-204ENST00000504430 TRBV7-7A0A0K0K1E9 115 aa3.25□□□□□ -1.89
NIPBL-204ENST00000504430 Q8NAQ8 132 aa3.25□□□□□ -1.89
NIPBL-204ENST00000504430 Q8TAT8 98 aa3.25□□□□□ -1.89
NIPBL-204ENST00000504430 S100ZQ8WXG8 99 aa3.25□□□□□ -1.89
NIPBL-204ENST00000504430 RPS10P5Q9NQ39 176 aa3.25□□□□□ -1.89
NIPBL-204ENST00000504430 MARF1Q9Y4F3 1742 aaKnown RBP3.25□□□□□ -1.89
NIPBL-204ENST00000504430 IGHV1-18A0A0C4DH31 117 aa3.25□□□□□ -1.89
NIPBL-204ENST00000504430 NMSQ5H8A3 153 aa3.25□□□□□ -1.89
NIPBL-204ENST00000504430 Q6ZS52 159 aa3.25□□□□□ -1.89
NIPBL-204ENST00000504430 FAM215AQ9Y5M1 114 aa3.25□□□□□ -1.89
NIPBL-204ENST00000504430 MDC1Q14676 2089 aaKnown RBP3.25□□□□□ -1.89
NIPBL-204ENST00000504430 ABCC3O15438 1527 aa3.25□□□□□ -1.89
NIPBL-204ENST00000504430 HMSDA8MTL9 139 aa3.25□□□□□ -1.89
NIPBL-204ENST00000504430 GYPAP02724 150 aa3.25□□□□□ -1.89
NIPBL-204ENST00000504430 MIR22HGQ0VDD5 57 aa3.25□□□□□ -1.89
NIPBL-204ENST00000504430 SPATA45Q537H7 98 aa3.25□□□□□ -1.89
NIPBL-204ENST00000504430 HEPN1Q6WQI6 88 aa3.25□□□□□ -1.89
NIPBL-204ENST00000504430 DYNLRB2Q8TF09 96 aa3.25□□□□□ -1.89
NIPBL-204ENST00000504430 ZNF431Q8TF32 576 aaPredicted RBP3.25□□□□□ -1.89
NIPBL-204ENST00000504430 Q96M85 177 aa3.25□□□□□ -1.89
NIPBL-204ENST00000504430 LTN1O94822 1766 aa3.24□□□□□ -1.89
NIPBL-204ENST00000504430 TRAV14DV4A0A0A6YYC5 116 aa3.24□□□□□ -1.89
NIPBL-204ENST00000504430 CRYM-AS1A6NIL9 109 aa3.24□□□□□ -1.89
NIPBL-204ENST00000504430 IBA57-AS1B1ANH7 110 aa3.24□□□□□ -1.89
NIPBL-204ENST00000504430 H3BRM9 83 aa3.24□□□□□ -1.89
NIPBL-204ENST00000504430 YPEL1O60688 119 aa3.24□□□□□ -1.89
NIPBL-204ENST00000504430 LPAL2Q16609 132 aa3.24□□□□□ -1.89
NIPBL-204ENST00000504430 C15orf53Q8NAA6 179 aa3.24□□□□□ -1.89
NIPBL-204ENST00000504430 FANCAO15360 1455 aa3.24□□□□□ -1.89
NIPBL-204ENST00000504430 GAPVD1Q14C86 1478 aa3.24□□□□□ -1.89
NIPBL-204ENST00000504430 IGKV3D-15A0A087WSY6 115 aa3.24□□□□□ -1.89
NIPBL-204ENST00000504430 CD24P25063 80 aa3.24□□□□□ -1.89
NIPBL-204ENST00000504430 Q6ZR54 194 aa3.24□□□□□ -1.89
NIPBL-204ENST00000504430 COMMD6Q7Z4G1 85 aa3.24□□□□□ -1.89
NIPBL-204ENST00000504430 DYNAPQ8N1N2 210 aa3.24□□□□□ -1.89
NIPBL-204ENST00000504430 RGPD4Q7Z3J3 1758 aa3.24□□□□□ -1.89
NIPBL-204ENST00000504430 NXT2Q9NPJ8 142 aaKnown RBP3.24□□□□□ -1.89
NIPBL-204ENST00000504430 KLK12Q9UKR0 248 aa3.24□□□□□ -1.89
NIPBL-204ENST00000504430 IL4P05112 153 aa3.23□□□□□ -1.89
NIPBL-204ENST00000504430 PPDPFLQ8WWR9 84 aa3.23□□□□□ -1.89
NIPBL-204ENST00000504430 IQGAP3Q86VI3 1631 aa3.23□□□□□ -1.89
NIPBL-204ENST00000504430 SIPA1L2Q9P2F8 1722 aaPredicted RBP3.23□□□□□ -1.89
NIPBL-204ENST00000504430 LYRM1O43325 122 aa3.23□□□□□ -1.89
NIPBL-204ENST00000504430 ARPINQ7Z6K5 226 aa3.23□□□□□ -1.89
NIPBL-204ENST00000504430 CLECL1Q8IZS7 167 aa3.23□□□□□ -1.89
NIPBL-204ENST00000504430 CDK13Q14004 1512 aaKnown RBP3.23□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 83.4 ms