RNA–Protein interactions for RNA: ENST00000504195.1

HMGB3P17-201, Transcript of high mobility group box 3 pseudogene 17, humanhuman

BASIC

Gene HMGB3P17, Length 649 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P17-201ENST00000504195 CCL20P78556 96 aa1.4□□□□□ -2.19
HMGB3P17-201ENST00000504195 ZNF117Q03924 483 aa1.4□□□□□ -2.19
HMGB3P17-201ENST00000504195 RPL18Q07020 188 aaKnown RBP1.4□□□□□ -2.19
HMGB3P17-201ENST00000504195 KLKP1Q107X0 134 aa1.4□□□□□ -2.19
HMGB3P17-201ENST00000504195 NSUN5P1Q3KNT7 163 aa1.4□□□□□ -2.19
HMGB3P17-201ENST00000504195 ORMDL2Q53FV1 153 aa1.4□□□□□ -2.19
HMGB3P17-201ENST00000504195 SPANXN4Q5MJ08 99 aa1.4□□□□□ -2.19
HMGB3P17-201ENST00000504195 LINC00242Q5T6M2 205 aa1.4□□□□□ -2.19
HMGB3P17-201ENST00000504195 ATP5EP2Q5VTU8 51 aa1.4□□□□□ -2.19
HMGB3P17-201ENST00000504195 NCBP2-AS2Q69YL0 99 aa1.4□□□□□ -2.19
HMGB3P17-201ENST00000504195 UNQ9165/PRO28630Q6UXU0 137 aa1.4□□□□□ -2.19
HMGB3P17-201ENST00000504195 ATP11AUNQ6ZP68 121 aa1.4□□□□□ -2.19
HMGB3P17-201ENST00000504195 Q6ZQT7 251 aa1.4□□□□□ -2.19
HMGB3P17-201ENST00000504195 C7orf65Q6ZTY9 151 aa1.4□□□□□ -2.19
HMGB3P17-201ENST00000504195 FP248Q71RG6 208 aaPredicted RBP1.4□□□□□ -2.19
HMGB3P17-201ENST00000504195 PCP2Q8IVA1 136 aa1.4□□□□□ -2.19
HMGB3P17-201ENST00000504195 Q8N2B8 174 aa1.4□□□□□ -2.19
HMGB3P17-201ENST00000504195 NKAPP1Q8N9T2 125 aa1.4□□□□□ -2.19
HMGB3P17-201ENST00000504195 WFDC11Q8NEX6 87 aa1.4□□□□□ -2.19
HMGB3P17-201ENST00000504195 OR8A1Q8NGG7 326 aa1.4□□□□□ -2.19
HMGB3P17-201ENST00000504195 ZNF563Q8TA94 476 aa1.4□□□□□ -2.19
HMGB3P17-201ENST00000504195 DIRC1Q969H9 104 aa1.4□□□□□ -2.19
HMGB3P17-201ENST00000504195 SPTSSAQ969W0 71 aa1.4□□□□□ -2.19
HMGB3P17-201ENST00000504195 SPACA5Q96QH8 159 aa1.4□□□□□ -2.19
HMGB3P17-201ENST00000504195 FAM103A1Q9BTL3 118 aaKnown RBP1.4□□□□□ -2.19
HMGB3P17-201ENST00000504195 KRTAP4-1Q9BYQ7 146 aa1.4□□□□□ -2.19
HMGB3P17-201ENST00000504195 PARP12Q9H0J9 701 aaKnown RBP1.4□□□□□ -2.19
HMGB3P17-201ENST00000504195 NXT2Q9NPJ8 142 aaKnown RBP1.4□□□□□ -2.19
HMGB3P17-201ENST00000504195 TAS2R4Q9NYW5 299 aa1.4□□□□□ -2.19
HMGB3P17-201ENST00000504195 ZNF492Q9P255 531 aa1.4□□□□□ -2.19
HMGB3P17-201ENST00000504195 EPDR1Q9UM22 224 aa1.4□□□□□ -2.19
HMGB3P17-201ENST00000504195 HHLA3Q9XRX5 114 aa1.4□□□□□ -2.19
HMGB3P17-201ENST00000504195 LINC00588Q9Y4M8 146 aa1.4□□□□□ -2.19
HMGB3P17-201ENST00000504195 TIMM9Q9Y5J7 89 aa1.4□□□□□ -2.19
HMGB3P17-201ENST00000504195 MIA3Q5JRA6 1907 aa1.4□□□□□ -2.19
HMGB3P17-201ENST00000504195 NUP205Q92621 2012 aa1.39□□□□□ -2.19
HMGB3P17-201ENST00000504195 TICRRQ7Z2Z1 1910 aa1.39□□□□□ -2.19
HMGB3P17-201ENST00000504195 IGLV1-36A0A0B4J1U3 117 aa1.39□□□□□ -2.19
HMGB3P17-201ENST00000504195 IGHV3-16A0A0C4DH30 117 aa1.39□□□□□ -2.19
HMGB3P17-201ENST00000504195 A0A0D9SEW6 157 aa1.39□□□□□ -2.19
HMGB3P17-201ENST00000504195 hADV29S1A0JD25 119 aa1.39□□□□□ -2.19
HMGB3P17-201ENST00000504195 RPL37AP8A6NKH3 93 aa1.39□□□□□ -2.19
HMGB3P17-201ENST00000504195 A8MUN3 132 aa1.39□□□□□ -2.19
HMGB3P17-201ENST00000504195 INS-IGF2F8WCM5 200 aa1.39□□□□□ -2.19
HMGB3P17-201ENST00000504195 H3BMM0 161 aa1.39□□□□□ -2.19
HMGB3P17-201ENST00000504195 J3QRE1 110 aa1.39□□□□□ -2.19
HMGB3P17-201ENST00000504195 TMEM256-PLSCR3K7ERE1 68 aa1.39□□□□□ -2.19
HMGB3P17-201ENST00000504195 SLC25A20O43772 301 aa1.39□□□□□ -2.19
HMGB3P17-201ENST00000504195 TIMM17BO60830 172 aa1.39□□□□□ -2.19
HMGB3P17-201ENST00000504195 IGHV3-9P01782 118 aa1.39□□□□□ -2.19
HMGB3P17-201ENST00000504195 IGKV3-11P04433 115 aa1.39□□□□□ -2.19
HMGB3P17-201ENST00000504195 CCKP06307 115 aa1.39□□□□□ -2.19
HMGB3P17-201ENST00000504195 CCL4P13236 92 aa1.39□□□□□ -2.19
HMGB3P17-201ENST00000504195 ZNF32P17041 273 aa1.39□□□□□ -2.19
HMGB3P17-201ENST00000504195 UBE2AP49459 152 aa1.39□□□□□ -2.19
HMGB3P17-201ENST00000504195 DYNLT3P51808 116 aa1.39□□□□□ -2.19
HMGB3P17-201ENST00000504195 ZNF136P52737 540 aa1.39□□□□□ -2.19
HMGB3P17-201ENST00000504195 CRYBA2P53672 197 aa1.39□□□□□ -2.19
HMGB3P17-201ENST00000504195 CAV3P56539 151 aa1.39□□□□□ -2.19
HMGB3P17-201ENST00000504195 INSL4Q14641 139 aa1.39□□□□□ -2.19
HMGB3P17-201ENST00000504195 MLF2Q15773 248 aaPredicted RBP1.39□□□□□ -2.19
HMGB3P17-201ENST00000504195 Q1T7F1 81 aa1.39□□□□□ -2.19
HMGB3P17-201ENST00000504195 RSPO1Q2MKA7 263 aaPredicted RBP1.39□□□□□ -2.19
HMGB3P17-201ENST00000504195 SP6Q3SY56 376 aa1.39□□□□□ -2.19
HMGB3P17-201ENST00000504195 C1orf100Q5SVJ3 147 aa1.39□□□□□ -2.19
HMGB3P17-201ENST00000504195 CHCHD2P9Q5T1J5 151 aaPredicted RBP1.39□□□□□ -2.19
HMGB3P17-201ENST00000504195 ZFP2Q6ZN57 461 aa1.39□□□□□ -2.19
HMGB3P17-201ENST00000504195 MDP1Q86V88 176 aa1.39□□□□□ -2.19
HMGB3P17-201ENST00000504195 NDUFA11Q86Y39 141 aa1.39□□□□□ -2.19
HMGB3P17-201ENST00000504195 Q8N8P6 123 aa1.39□□□□□ -2.19
HMGB3P17-201ENST00000504195 DAND5Q8N907 189 aa1.39□□□□□ -2.19
HMGB3P17-201ENST00000504195 C11orf72Q8NBR9 251 aa1.39□□□□□ -2.19
HMGB3P17-201ENST00000504195 RFESDQ8TAC1 157 aa1.39□□□□□ -2.19
HMGB3P17-201ENST00000504195 DCANP1Q8TF63 244 aa1.39□□□□□ -2.19
HMGB3P17-201ENST00000504195 ITLN1Q8WWA0 313 aa1.39□□□□□ -2.19
HMGB3P17-201ENST00000504195 C11orf52Q96A22 123 aa1.39□□□□□ -2.19
HMGB3P17-201ENST00000504195 UBE2WQ96B02 151 aa1.39□□□□□ -2.19
HMGB3P17-201ENST00000504195 ZNF714Q96N38 554 aa1.39□□□□□ -2.19
HMGB3P17-201ENST00000504195 TIMM17AQ99595 171 aa1.39□□□□□ -2.19
HMGB3P17-201ENST00000504195 TMEM243Q9BU79 118 aa1.39□□□□□ -2.19
HMGB3P17-201ENST00000504195 CXCL16Q9H2A7 254 aa1.39□□□□□ -2.19
HMGB3P17-201ENST00000504195 PLEKHA3Q9HB20 300 aa1.39□□□□□ -2.19
HMGB3P17-201ENST00000504195 DEPPQ9NTK1 212 aa1.39□□□□□ -2.19
HMGB3P17-201ENST00000504195 MRPL35Q9NZE8 188 aaKnown RBP1.39□□□□□ -2.19
HMGB3P17-201ENST00000504195 XCL2Q9UBD3 114 aa1.39□□□□□ -2.19
HMGB3P17-201ENST00000504195 KLK5Q9Y337 293 aaPredicted RBP1.39□□□□□ -2.19
HMGB3P17-201ENST00000504195 F11RQ9Y624 299 aaKnown RBP1.39□□□□□ -2.19
HMGB3P17-201ENST00000504195 ZFC3H1O60293 1989 aaKnown RBP1.39□□□□□ -2.19
HMGB3P17-201ENST00000504195 COL18A1P39060 1754 aa1.39□□□□□ -2.19
HMGB3P17-201ENST00000504195 CCDC88CQ9P219 2028 aa1.39□□□□□ -2.19
HMGB3P17-201ENST00000504195 TRBV7-3A0A075B6L6 115 aa1.38□□□□□ -2.19
HMGB3P17-201ENST00000504195 IGHV6-1A0A0B4J1U7 121 aa1.38□□□□□ -2.19
HMGB3P17-201ENST00000504195 TRAV13-2A0A0B4J235 113 aa1.38□□□□□ -2.19
HMGB3P17-201ENST00000504195 A0A0B4J2C4 111 aa1.38□□□□□ -2.19
HMGB3P17-201ENST00000504195 TRGV8A0A0C4DH27 118 aa1.38□□□□□ -2.19
HMGB3P17-201ENST00000504195 A0A0J9YXV3 536 aa1.38□□□□□ -2.19
HMGB3P17-201ENST00000504195 TRBV10-3A0A0K0K1G6 114 aa1.38□□□□□ -2.19
HMGB3P17-201ENST00000504195 TRBV10-2A0A0K0K1G8 114 aa1.38□□□□□ -2.19
HMGB3P17-201ENST00000504195 CTXND1A0A1B0GTU2 59 aa1.38□□□□□ -2.19
HMGB3P17-201ENST00000504195 C12orf77C9JDV5 145 aa1.38□□□□□ -2.19
Retrieved 100 of 20,778 RNA–protein pairs in 131.3 ms