RNA–Protein interactions for RNA: ENST00000503338.5

TOPBP1-202, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 3

Gene TOPBP1, Length 618 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-202ENST00000503338 CNFNQ9BYD5 112 aa6.01□□□□□ -1.45
TOPBP1-202ENST00000503338 C19orf73Q9NVV2 129 aa6.01□□□□□ -1.45
TOPBP1-202ENST00000503338 SORL1Q92673 2214 aa6.01□□□□□ -1.45
TOPBP1-202ENST00000503338 TRGV11A0A075B6L2 103 aa6□□□□□ -1.45
TOPBP1-202ENST00000503338 M0R2Z0 102 aa6□□□□□ -1.45
TOPBP1-202ENST00000503338 ZNF324O75467 553 aaPredicted RBP6□□□□□ -1.45
TOPBP1-202ENST00000503338 INSP01308 110 aa6□□□□□ -1.45
TOPBP1-202ENST00000503338 CD7P09564 240 aa6□□□□□ -1.45
TOPBP1-202ENST00000503338 IGLC6P0CF74 106 aa6□□□□□ -1.45
TOPBP1-202ENST00000503338 S100A4P26447 101 aaKnown RBP6□□□□□ -1.45
TOPBP1-202ENST00000503338 CACNG7P62955 275 aa6□□□□□ -1.45
TOPBP1-202ENST00000503338 SPINK13Q1W4C9 94 aa6□□□□□ -1.45
TOPBP1-202ENST00000503338 PRR9Q5T870 116 aa6□□□□□ -1.45
TOPBP1-202ENST00000503338 GFI1BQ5VTD9 330 aa6□□□□□ -1.45
TOPBP1-202ENST00000503338 LINC00467Q9BRT7 94 aa6□□□□□ -1.45
TOPBP1-202ENST00000503338 TRAPPC1Q9Y5R8 145 aa6□□□□□ -1.45
TOPBP1-202ENST00000503338 MAST4O15021 2626 aa5.99□□□□□ -1.45
TOPBP1-202ENST00000503338 IGHV1OR15-1A0A075B7D0 117 aa5.99□□□□□ -1.45
TOPBP1-202ENST00000503338 TMSB15BA0A087X1C1 80 aa5.99□□□□□ -1.45
TOPBP1-202ENST00000503338 TRAV12-3A0A0B4J271 114 aa5.99□□□□□ -1.45
TOPBP1-202ENST00000503338 A0A1B0GXF2 115 aa5.99□□□□□ -1.45
TOPBP1-202ENST00000503338 SNURFLB1AK76 121 aa5.99□□□□□ -1.45
TOPBP1-202ENST00000503338 SNAI2O43623 268 aa5.99□□□□□ -1.45
TOPBP1-202ENST00000503338 GZMBP10144 247 aa5.99□□□□□ -1.45
TOPBP1-202ENST00000503338 ANXA2RQ3ZCQ2 193 aa5.99□□□□□ -1.45
TOPBP1-202ENST00000503338 MRPL54Q6P161 138 aaKnown RBP5.99□□□□□ -1.45
TOPBP1-202ENST00000503338 LYZL1Q6UWQ5 148 aa5.99□□□□□ -1.45
TOPBP1-202ENST00000503338 SMIM15Q7Z3B0 74 aa5.99□□□□□ -1.45
TOPBP1-202ENST00000503338 TPPP3Q9BW30 176 aa5.99□□□□□ -1.45
TOPBP1-202ENST00000503338 SSBP4Q9BWG4 385 aaPredicted RBP5.99□□□□□ -1.45
TOPBP1-202ENST00000503338 NAGKQ9UJ70 344 aa5.99□□□□□ -1.45
TOPBP1-202ENST00000503338 TEP1Q99973 2627 aaKnown RBP5.98□□□□□ -1.45
TOPBP1-202ENST00000503338 IGHV4-4A0A075B6R2 117 aa5.98□□□□□ -1.45
TOPBP1-202ENST00000503338 TRAV12-2A0A075B6T6 113 aa5.98□□□□□ -1.45
TOPBP1-202ENST00000503338 CRXO43186 299 aaPredicted RBP5.98□□□□□ -1.45
TOPBP1-202ENST00000503338 SPINK4O60575 86 aa5.98□□□□□ -1.45
TOPBP1-202ENST00000503338 TRGC2P03986 189 aa5.98□□□□□ -1.45
TOPBP1-202ENST00000503338 IGLL1P15814 213 aa5.98□□□□□ -1.45
TOPBP1-202ENST00000503338 RAB4BP61018 213 aa5.98□□□□□ -1.45
TOPBP1-202ENST00000503338 ZNF124Q15973 351 aa5.98□□□□□ -1.45
TOPBP1-202ENST00000503338 TMEM136Q6ZRR5 245 aa5.98□□□□□ -1.45
TOPBP1-202ENST00000503338 GATD1Q8NB37 220 aa5.98□□□□□ -1.45
TOPBP1-202ENST00000503338 FRZBQ92765 325 aa5.98□□□□□ -1.45
TOPBP1-202ENST00000503338 C11orf21Q9P2W6 132 aa5.98□□□□□ -1.45
TOPBP1-202ENST00000503338 ATRQ13535 2644 aa5.98□□□□□ -1.45
TOPBP1-202ENST00000503338 KIR2DL5BA0A0G2JN68 375 aa5.97□□□□□ -1.45
TOPBP1-202ENST00000503338 KIR2DL5BA0A0G2JPC4 375 aa5.97□□□□□ -1.45
TOPBP1-202ENST00000503338 GRIFINA4D1Z8 144 aa5.97□□□□□ -1.45
TOPBP1-202ENST00000503338 RBMY1BA6NDE4 496 aaKnown RBP5.97□□□□□ -1.45
TOPBP1-202ENST00000503338 RBMY1EA6NEQ0 496 aaKnown RBP5.97□□□□□ -1.45
TOPBP1-202ENST00000503338 APCSP02743 223 aa5.97□□□□□ -1.45
TOPBP1-202ENST00000503338 S100A6P06703 90 aa5.97□□□□□ -1.45
TOPBP1-202ENST00000503338 RBMY1DP0C7P1 496 aaKnown RBP5.97□□□□□ -1.45
TOPBP1-202ENST00000503338 ARMS2P0C7Q2 107 aa5.97□□□□□ -1.45
TOPBP1-202ENST00000503338 TRGC1P0CF51 173 aa5.97□□□□□ -1.45
TOPBP1-202ENST00000503338 CAMPP49913 170 aa5.97□□□□□ -1.45
TOPBP1-202ENST00000503338 FABP9Q0Z7S8 132 aa5.97□□□□□ -1.45
TOPBP1-202ENST00000503338 KIR3DS1Q14943 382 aa5.97□□□□□ -1.45
TOPBP1-202ENST00000503338 MUC21Q5SSG8 566 aa5.97□□□□□ -1.45
TOPBP1-202ENST00000503338 SPANXN1Q5VSR9 72 aa5.97□□□□□ -1.45
TOPBP1-202ENST00000503338 ZNF493Q6ZR52 646 aa5.97□□□□□ -1.45
TOPBP1-202ENST00000503338 KIR2DL5AQ8N109 375 aa5.97□□□□□ -1.45
TOPBP1-202ENST00000503338 KIR2DL5BQ8NHK3 375 aa5.97□□□□□ -1.45
TOPBP1-202ENST00000503338 MRPL18Q9H0U6 180 aaKnown RBP5.97□□□□□ -1.45
TOPBP1-202ENST00000503338 SCRT2Q9NQ03 307 aa5.97□□□□□ -1.45
TOPBP1-202ENST00000503338 TP53TG3Q9ULZ0 132 aa5.97□□□□□ -1.45
TOPBP1-202ENST00000503338 TMA7Q9Y2S6 64 aaKnown RBP5.97□□□□□ -1.45
TOPBP1-202ENST00000503338 GOLT1BQ9Y3E0 138 aa5.97□□□□□ -1.45
TOPBP1-202ENST00000503338 PHLDA3Q9Y5J5 127 aa5.97□□□□□ -1.45
TOPBP1-202ENST00000503338 CBY3A6NI87 242 aa5.96□□□□□ -1.46
TOPBP1-202ENST00000503338 H3BVH4 76 aa5.96□□□□□ -1.46
TOPBP1-202ENST00000503338 NTF3P20783 257 aa5.96□□□□□ -1.46
TOPBP1-202ENST00000503338 FXYD7P58549 80 aa5.96□□□□□ -1.46
TOPBP1-202ENST00000503338 ZNF415Q09FC8 603 aa5.96□□□□□ -1.46
TOPBP1-202ENST00000503338 EGFEM1PQ0D2K5 195 aa5.96□□□□□ -1.46
TOPBP1-202ENST00000503338 TWIST1Q15672 202 aa5.96□□□□□ -1.46
TOPBP1-202ENST00000503338 PIK3CD-AS1Q5SR53 167 aa5.96□□□□□ -1.46
TOPBP1-202ENST00000503338 ZNF575Q86XF7 245 aa5.96□□□□□ -1.46
TOPBP1-202ENST00000503338 ZFP82Q8N141 532 aa5.96□□□□□ -1.46
TOPBP1-202ENST00000503338 SYT8Q8NBV8 401 aa5.96□□□□□ -1.46
TOPBP1-202ENST00000503338 LINC01587Q99440 93 aa5.96□□□□□ -1.46
TOPBP1-202ENST00000503338 TMEM208Q9BTX3 173 aa5.96□□□□□ -1.46
TOPBP1-202ENST00000503338 NDUFAF3Q9BU61 184 aa5.96□□□□□ -1.46
TOPBP1-202ENST00000503338 TMEM191AQ9H0A3 160 aa5.96□□□□□ -1.46
TOPBP1-202ENST00000503338 CSTL1Q9H114 145 aa5.96□□□□□ -1.46
TOPBP1-202ENST00000503338 NIPBLQ6KC79 2804 aaeCLIP5.96□□□□□ -1.46
TOPBP1-202ENST00000503338 AGRNO00468 2067 aa5.95□□□□□ -1.46
TOPBP1-202ENST00000503338 LOC102724200A0A096LPH7 203 aaPredicted RBP5.95□□□□□ -1.46
TOPBP1-202ENST00000503338 IGHV3-16A0A0C4DH30 117 aa5.95□□□□□ -1.46
TOPBP1-202ENST00000503338 UBE2CO00762 179 aa5.95□□□□□ -1.46
TOPBP1-202ENST00000503338 PHOX2AO14813 284 aa5.95□□□□□ -1.46
TOPBP1-202ENST00000503338 GNRH2O43555 120 aa5.95□□□□□ -1.46
TOPBP1-202ENST00000503338 RNASE3P12724 160 aaKnown RBP5.95□□□□□ -1.46
TOPBP1-202ENST00000503338 APOC4P55056 127 aa5.95□□□□□ -1.46
TOPBP1-202ENST00000503338 C4orf48Q5BLP8 95 aa5.95□□□□□ -1.46
TOPBP1-202ENST00000503338 Q8N1Y9 231 aa5.95□□□□□ -1.46
TOPBP1-202ENST00000503338 DEFB125Q8N687 156 aa5.95□□□□□ -1.46
TOPBP1-202ENST00000503338 SPATA3Q8NHX4 192 aa5.95□□□□□ -1.46
TOPBP1-202ENST00000503338 PTH2Q96A98 100 aa5.95□□□□□ -1.46
TOPBP1-202ENST00000503338 C9orf85Q96MD7 179 aa5.95□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 83.4 ms