RNA–Protein interactions for RNA: ENST00000498271.1

C4A-259, Transcript of complement C4A (Rodgers blood group), humanhuman

TSL 1 (best) BASIC

Gene C4A, Length 5,269 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C4A-259ENST00000498271 ZMAT4Q9H898 229 aa11.91□□□□□ -0.5
C4A-259ENST00000498271 TRAV26-2A0A0B4J265 109 aa11.91□□□□□ -0.5
C4A-259ENST00000498271 MRPL53Q96EL3 112 aaKnown RBP11.9□□□□□ -0.5
C4A-259ENST00000498271 HERVK_113P63121 156 aa11.9□□□□□ -0.5
C4A-259ENST00000498271 LENEPQ9Y5L5 61 aa11.9□□□□□ -0.5
C4A-259ENST00000498271 FAM215AQ9Y5M1 114 aa11.9□□□□□ -0.5
C4A-259ENST00000498271 DIDO1Q9BTC0 2240 aaKnown RBP11.9□□□□□ -0.5
C4A-259ENST00000498271 COL6A6A6NMZ7 2263 aa11.9□□□□□ -0.5
C4A-259ENST00000498271 IGLV3-9A0A075B6K5 115 aa11.9□□□□□ -0.5
C4A-259ENST00000498271 NBASA2RRP1 2371 aa11.9□□□□□ -0.51
C4A-259ENST00000498271 RNF223E7ERA6 249 aa11.89□□□□□ -0.51
C4A-259ENST00000498271 TCTEX1D4Q5JR98 221 aa11.89□□□□□ -0.51
C4A-259ENST00000498271 C8orf31Q8N9H6 132 aa11.89□□□□□ -0.51
C4A-259ENST00000498271 IGHV1OR15-1A0A075B7D0 117 aa11.88□□□□□ -0.51
C4A-259ENST00000498271 ANXA2RQ3ZCQ2 193 aa11.88□□□□□ -0.51
C4A-259ENST00000498271 WFDC2Q14508 124 aa11.88□□□□□ -0.51
C4A-259ENST00000498271 TEX36Q5VZQ5 186 aa11.88□□□□□ -0.51
C4A-259ENST00000498271 TMEM219Q86XT9 240 aa11.88□□□□□ -0.51
C4A-259ENST00000498271 YLPM1P49750 1951 aaKnown RBP11.88□□□□□ -0.51
C4A-259ENST00000498271 TRAV12-1A0A0B4J245 112 aa11.88□□□□□ -0.51
C4A-259ENST00000498271 C11orf53Q8IXP5 236 aa11.88□□□□□ -0.51
C4A-259ENST00000498271 INS-IGF2F8WCM5 200 aa11.87□□□□□ -0.51
C4A-259ENST00000498271 HAMPP81172 84 aa11.87□□□□□ -0.51
C4A-259ENST00000498271 A0A0B4J2C4 111 aa11.87□□□□□ -0.51
C4A-259ENST00000498271 CADP27708 2225 aa11.87□□□□□ -0.51
C4A-259ENST00000498271 BAALC-AS2P0C853 105 aa11.86□□□□□ -0.51
C4A-259ENST00000498271 FXYD2P54710 66 aa11.86□□□□□ -0.51
C4A-259ENST00000498271 GOLGB1Q14789 3259 aaKnown RBP11.86□□□□□ -0.51
C4A-259ENST00000498271 TRAV26-1A0A087WT03 109 aa11.86□□□□□ -0.51
C4A-259ENST00000498271 NDUFC2O95298 119 aa11.86□□□□□ -0.51
C4A-259ENST00000498271 ATP5G1P05496 136 aa11.86□□□□□ -0.51
C4A-259ENST00000498271 LOXP28300 417 aaPredicted RBP11.86□□□□□ -0.51
C4A-259ENST00000498271 MRAPQ8TCY5 172 aa11.86□□□□□ -0.51
C4A-259ENST00000498271 DSCR8Q96T75 97 aa11.86□□□□□ -0.51
C4A-259ENST00000498271 NDUFA4O00483 81 aa11.86□□□□□ -0.51
C4A-259ENST00000498271 CR1LQ2VPA4 569 aa11.86□□□□□ -0.51
C4A-259ENST00000498271 RBM3P98179 157 aaKnown RBP11.86□□□□□ -0.51
C4A-259ENST00000498271 LINC00173Q6ZV60 143 aa11.86□□□□□ -0.51
C4A-259ENST00000498271 ZNF491Q8N8L2 437 aa11.86□□□□□ -0.51
C4A-259ENST00000498271 SPATA12Q7Z6I5 190 aa11.85□□□□□ -0.51
C4A-259ENST00000498271 SHANK1Q9Y566 2161 aa11.85□□□□□ -0.51
C4A-259ENST00000498271 LINC01620Q4KN68 170 aa11.85□□□□□ -0.51
C4A-259ENST00000498271 EGR2P11161 476 aaPredicted RBP11.85□□□□□ -0.51
C4A-259ENST00000498271 DOCK10Q96BY6 2186 aa11.85□□□□□ -0.51
C4A-259ENST00000498271 WT1P19544 449 aaPredicted RBP11.84□□□□□ -0.51
C4A-259ENST00000498271 MUC6Q6W4X9 2439 aa11.84□□□□□ -0.51
C4A-259ENST00000498271 HERV-K104P63124 156 aa11.84□□□□□ -0.51
C4A-259ENST00000498271 OVOL3O00110 214 aa11.84□□□□□ -0.51
C4A-259ENST00000498271 CRLF1O75462 422 aa11.83□□□□□ -0.52
C4A-259ENST00000498271 C11orf1Q9H5F2 150 aa11.83□□□□□ -0.52
C4A-259ENST00000498271 H3BT86 120 aa11.83□□□□□ -0.52
C4A-259ENST00000498271 BRD3OSQ6XYD6 125 aa11.83□□□□□ -0.52
C4A-259ENST00000498271 PIP4P2Q8N4L2 257 aa11.83□□□□□ -0.52
C4A-259ENST00000498271 PCNX1Q96RV3 2341 aa11.83□□□□□ -0.52
C4A-259ENST00000498271 H3BUX3 64 aa11.83□□□□□ -0.52
C4A-259ENST00000498271 CDK2AP2O75956 126 aa11.82□□□□□ -0.52
C4A-259ENST00000498271 GP9P14770 177 aa11.82□□□□□ -0.52
C4A-259ENST00000498271 UBE2E1P51965 193 aa11.82□□□□□ -0.52
C4A-259ENST00000498271 ATP6V0E1O15342 81 aa11.82□□□□□ -0.52
C4A-259ENST00000498271 Q71RC1 249 aaPredicted RBP11.82□□□□□ -0.52
C4A-259ENST00000498271 TRBV6-1A0A0K0K1D8 114 aa11.82□□□□□ -0.52
C4A-259ENST00000498271 TPSG1Q9NRR2 321 aa11.82□□□□□ -0.52
C4A-259ENST00000498271 PSCAO43653 123 aa11.82□□□□□ -0.52
C4A-259ENST00000498271 IGHV3-53P01767 116 aa11.82□□□□□ -0.52
C4A-259ENST00000498271 PIFOQ8TCI5 191 aa11.82□□□□□ -0.52
C4A-259ENST00000498271 CITED2Q99967 270 aaPredicted RBP11.82□□□□□ -0.52
C4A-259ENST00000498271 TMEM243Q9BU79 118 aa11.82□□□□□ -0.52
C4A-259ENST00000498271 BPESC1Q9GZL8 116 aa11.82□□□□□ -0.52
C4A-259ENST00000498271 ORMDL1Q9P0S3 153 aa11.82□□□□□ -0.52
C4A-259ENST00000498271 DIAPH2-AS1Q14236 149 aa11.81□□□□□ -0.52
C4A-259ENST00000498271 H0YGX0 51 aa11.81□□□□□ -0.52
C4A-259ENST00000498271 ICOSQ9Y6W8 199 aa11.81□□□□□ -0.52
C4A-259ENST00000498271 ALPK3Q96L96 1907 aa11.81□□□□□ -0.52
C4A-259ENST00000498271 USF3Q68DE3 2245 aa11.81□□□□□ -0.52
C4A-259ENST00000498271 SAA4P35542 130 aa11.81□□□□□ -0.52
C4A-259ENST00000498271 TMEM131Q92545 1883 aa11.81□□□□□ -0.52
C4A-259ENST00000498271 TRBV10-2A0A0K0K1G8 114 aa11.81□□□□□ -0.52
C4A-259ENST00000498271 FAM236AA0A1B0GUQ0 79 aa11.81□□□□□ -0.52
C4A-259ENST00000498271 FAM236BA0A1B0GV22 79 aa11.81□□□□□ -0.52
C4A-259ENST00000498271 IGFL2Q6UWQ7 119 aa11.81□□□□□ -0.52
C4A-259ENST00000498271 PCNX2A6NKB5 2137 aa11.8□□□□□ -0.52
C4A-259ENST00000498271 ASPHD1Q5U4P2 390 aa11.8□□□□□ -0.52
C4A-259ENST00000498271 IL17DQ8TAD2 202 aa11.8□□□□□ -0.52
C4A-259ENST00000498271 C2orf70A6NJV1 201 aa11.8□□□□□ -0.52
C4A-259ENST00000498271 E9PLD3 99 aa11.8□□□□□ -0.52
C4A-259ENST00000498271 DEFB113Q30KQ7 82 aa11.8□□□□□ -0.52
C4A-259ENST00000498271 KLHL30-AS1Q8NEE0 82 aa11.8□□□□□ -0.52
C4A-259ENST00000498271 PFN2P35080 140 aa11.8□□□□□ -0.52
C4A-259ENST00000498271 SPRY4Q9C004 299 aa11.8□□□□□ -0.52
C4A-259ENST00000498271 A0A1W2PNU3 283 aaPredicted RBP11.79□□□□□ -0.52
C4A-259ENST00000498271 IGFBPL1Q8WX77 278 aa11.79□□□□□ -0.52
C4A-259ENST00000498271 C1orf43Q9BWL3 253 aa11.79□□□□□ -0.52
C4A-259ENST00000498271 CREBBPQ92793 2442 aa11.79□□□□□ -0.52
C4A-259ENST00000498271 A4D1N5 150 aa11.79□□□□□ -0.52
C4A-259ENST00000498271 SPRNQ5BIV9 151 aa11.79□□□□□ -0.52
C4A-259ENST00000498271 WNK2Q9Y3S1 2297 aa11.79□□□□□ -0.52
C4A-259ENST00000498271 DENND4AQ7Z401 1863 aa11.79□□□□□ -0.52
C4A-259ENST00000498271 APOC4P55056 127 aa11.79□□□□□ -0.52
C4A-259ENST00000498271 C11orf44Q8N8P7 122 aa11.78□□□□□ -0.52
C4A-259ENST00000498271 GTSF1Q8WW33 167 aa11.78□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 259.2 ms