RNA–Protein interactions for RNA: ENST00000496959.5

MDM2-220, Transcript of MDM2 proto-oncogene, humanhuman

TSL 1 (best)

Gene MDM2, Length 897 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDM2-220ENST00000496959 BOLA2-SMG1P6H3BVE0 249 aa2.32□□□□□ -2.04
MDM2-220ENST00000496959 SIVA1O15304 175 aa2.32□□□□□ -2.04
MDM2-220ENST00000496959 C1QBP02746 253 aa2.32□□□□□ -2.04
MDM2-220ENST00000496959 RLN2P04090 185 aa2.32□□□□□ -2.04
MDM2-220ENST00000496959 DEFB130BP0DP73 79 aa2.32□□□□□ -2.04
MDM2-220ENST00000496959 DEFB130AP0DP74 79 aa2.32□□□□□ -2.04
MDM2-220ENST00000496959 RCVRNP35243 200 aa2.32□□□□□ -2.04
MDM2-220ENST00000496959 RND2P52198 227 aa2.32□□□□□ -2.04
MDM2-220ENST00000496959 GABARAPL2P60520 117 aa2.32□□□□□ -2.04
MDM2-220ENST00000496959 SPCS3P61009 180 aa2.32□□□□□ -2.04
MDM2-220ENST00000496959 BSXQ3C1V8 233 aa2.32□□□□□ -2.04
MDM2-220ENST00000496959 UBE2NLQ5JXB2 153 aa2.32□□□□□ -2.04
MDM2-220ENST00000496959 TMEM69Q5SWH9 247 aa2.32□□□□□ -2.04
MDM2-220ENST00000496959 GPR107Q5VW38 600 aa2.32□□□□□ -2.04
MDM2-220ENST00000496959 C22orf42Q6IC83 251 aa2.32□□□□□ -2.04
MDM2-220ENST00000496959 LAIR2Q6ISS4 152 aa2.32□□□□□ -2.04
MDM2-220ENST00000496959 TMEM144Q7Z5S9 345 aa2.32□□□□□ -2.04
MDM2-220ENST00000496959 OR8I2Q8N0Y5 310 aa2.32□□□□□ -2.04
MDM2-220ENST00000496959 C10orf126Q8N4M7 172 aa2.32□□□□□ -2.04
MDM2-220ENST00000496959 S100A16Q96FQ6 103 aaKnown RBP2.32□□□□□ -2.04
MDM2-220ENST00000496959 LINC00052Q96N35 136 aa2.32□□□□□ -2.04
MDM2-220ENST00000496959 FXYD6Q9H0Q3 95 aa2.32□□□□□ -2.04
MDM2-220ENST00000496959 AUNIPQ9H7T9 357 aa2.32□□□□□ -2.04
MDM2-220ENST00000496959 COPZ2Q9P299 210 aa2.32□□□□□ -2.04
MDM2-220ENST00000496959 LINC00588Q9Y4M8 146 aa2.32□□□□□ -2.04
MDM2-220ENST00000496959 HSPG2P98160 4391 aa2.32□□□□□ -2.04
MDM2-220ENST00000496959 DYNC1H1Q14204 4646 aaKnown RBP2.32□□□□□ -2.04
MDM2-220ENST00000496959 DNAH2Q9P225 4427 aa2.31□□□□□ -2.04
MDM2-220ENST00000496959 SMIM31A0A1B0GVY4 71 aa2.31□□□□□ -2.04
MDM2-220ENST00000496959 ZNF98A6NK75 572 aa2.31□□□□□ -2.04
MDM2-220ENST00000496959 H7BYZ3 331 aa2.31□□□□□ -2.04
MDM2-220ENST00000496959 TNFAIP8O95379 198 aa2.31□□□□□ -2.04
MDM2-220ENST00000496959 CXCL2P19875 107 aa2.31□□□□□ -2.04
MDM2-220ENST00000496959 PRSS3P35030 304 aa2.31□□□□□ -2.04
MDM2-220ENST00000496959 HRH1P35367 487 aa2.31□□□□□ -2.04
MDM2-220ENST00000496959 TDRG1Q3Y452 100 aa2.31□□□□□ -2.04
MDM2-220ENST00000496959 FAM78BQ5VT40 261 aa2.31□□□□□ -2.04
MDM2-220ENST00000496959 PRSS54Q6PEW0 395 aa2.31□□□□□ -2.04
MDM2-220ENST00000496959 C1orf158Q8N1D5 194 aa2.31□□□□□ -2.04
MDM2-220ENST00000496959 ZNF680Q8NEM1 530 aa2.31□□□□□ -2.04
MDM2-220ENST00000496959 DEFB104AQ8WTQ1 72 aa2.31□□□□□ -2.04
MDM2-220ENST00000496959 C15orf40Q8WUR7 153 aa2.31□□□□□ -2.04
MDM2-220ENST00000496959 SLC35B3Q9H1N7 401 aa2.31□□□□□ -2.04
MDM2-220ENST00000496959 CTNNBIP1Q9NSA3 81 aaPredicted RBP2.31□□□□□ -2.04
MDM2-220ENST00000496959 TXNL4BQ9NX01 149 aaKnown RBP2.31□□□□□ -2.04
MDM2-220ENST00000496959 CARHSP1Q9Y2V2 147 aaKnown RBP2.31□□□□□ -2.04
MDM2-220ENST00000496959 ICOSQ9Y6W8 199 aa2.31□□□□□ -2.04
MDM2-220ENST00000496959 U3KQ87 197 aa2.31□□□□□ -2.04
MDM2-220ENST00000496959 ABCA13Q86UQ4 5058 aa2.31□□□□□ -2.04
MDM2-220ENST00000496959 TRAV26-1A0A087WT03 109 aa2.3□□□□□ -2.04
MDM2-220ENST00000496959 A0A0B4J2A0 478 aa2.3□□□□□ -2.04
MDM2-220ENST00000496959 C3orf85A0A1B0GTC6 90 aa2.3□□□□□ -2.04
MDM2-220ENST00000496959 CEBPZOSA8MTT3 80 aa2.3□□□□□ -2.04
MDM2-220ENST00000496959 SNRPGP15A8MWD9 76 aa2.3□□□□□ -2.04
MDM2-220ENST00000496959 OXTP01178 125 aa2.3□□□□□ -2.04
MDM2-220ENST00000496959 PMP2P02689 132 aa2.3□□□□□ -2.04
MDM2-220ENST00000496959 AKR1C4P17516 323 aa2.3□□□□□ -2.04
MDM2-220ENST00000496959 RPL7P18124 248 aaKnown RBP2.3□□□□□ -2.04
MDM2-220ENST00000496959 EVI2AP22794 236 aa2.3□□□□□ -2.04
MDM2-220ENST00000496959 SDC2P34741 201 aa2.3□□□□□ -2.04
MDM2-220ENST00000496959 GPX4P36969 197 aaPredicted RBP2.3□□□□□ -2.04
MDM2-220ENST00000496959 CDKN1BP46527 198 aa2.3□□□□□ -2.04
MDM2-220ENST00000496959 PIGPP57054 158 aa2.3□□□□□ -2.04
MDM2-220ENST00000496959 FXYD7P58549 80 aa2.3□□□□□ -2.04
MDM2-220ENST00000496959 RAB11AP62491 216 aa2.3□□□□□ -2.04
MDM2-220ENST00000496959 RNASE10Q5GAN6 216 aaKnown RBP2.3□□□□□ -2.04
MDM2-220ENST00000496959 NMSQ5H8A3 153 aa2.3□□□□□ -2.04
MDM2-220ENST00000496959 GDF5OSQ5U4N7 250 aa2.3□□□□□ -2.04
MDM2-220ENST00000496959 ZNF738Q8NE65 137 aa2.3□□□□□ -2.04
MDM2-220ENST00000496959 BPIFCQ8NFQ6 507 aa2.3□□□□□ -2.04
MDM2-220ENST00000496959 OR1S1Q8NH92 325 aa2.3□□□□□ -2.04
MDM2-220ENST00000496959 GPX8Q8TED1 209 aa2.3□□□□□ -2.04
MDM2-220ENST00000496959 RBPMSQ93062 196 aaKnown RBP2.3□□□□□ -2.04
MDM2-220ENST00000496959 GPR146Q96CH1 333 aa2.3□□□□□ -2.04
MDM2-220ENST00000496959 ACY3Q96HD9 319 aa2.3□□□□□ -2.04
MDM2-220ENST00000496959 CIB3Q96Q77 187 aaPredicted RBP2.3□□□□□ -2.04
MDM2-220ENST00000496959 CAMK2N2Q96S95 79 aa2.3□□□□□ -2.04
MDM2-220ENST00000496959 LINC01587Q99440 93 aa2.3□□□□□ -2.04
MDM2-220ENST00000496959 LINC00467Q9BRT7 94 aa2.3□□□□□ -2.04
MDM2-220ENST00000496959 PBDC1Q9BVG4 233 aa2.3□□□□□ -2.04
MDM2-220ENST00000496959 TMEM147Q9BVK8 224 aa2.3□□□□□ -2.04
MDM2-220ENST00000496959 SH3BGRL3Q9H299 93 aa2.3□□□□□ -2.04
MDM2-220ENST00000496959 VCX2Q9H322 139 aa2.3□□□□□ -2.04
MDM2-220ENST00000496959 Q9H521 79 aa2.3□□□□□ -2.04
MDM2-220ENST00000496959 SHPKQ9UHJ6 478 aa2.3□□□□□ -2.04
MDM2-220ENST00000496959 PSG8Q9UQ74 426 aa2.3□□□□□ -2.04
MDM2-220ENST00000496959 C14orf166Q9Y224 244 aaKnown RBP2.3□□□□□ -2.04
MDM2-220ENST00000496959 LY96Q9Y6Y9 160 aa2.3□□□□□ -2.04
MDM2-220ENST00000496959 TMEM56-RWDD3S4R434 201 aa2.3□□□□□ -2.04
MDM2-220ENST00000496959 DNAH17Q9UFH2 4485 aa2.29□□□□□ -2.04
MDM2-220ENST00000496959 PKD1P98161 4303 aa2.29□□□□□ -2.04
MDM2-220ENST00000496959 A0A087WTM6 91 aa2.29□□□□□ -2.04
MDM2-220ENST00000496959 ZNF701M0R085 212 aaPredicted RBP2.29□□□□□ -2.04
MDM2-220ENST00000496959 M0R2Z0 102 aa2.29□□□□□ -2.04
MDM2-220ENST00000496959 PSCAO43653 123 aa2.29□□□□□ -2.04
MDM2-220ENST00000496959 IGKV1-39P01597 117 aa2.29□□□□□ -2.04
MDM2-220ENST00000496959 IGKV1-5P01602 117 aa2.29□□□□□ -2.04
MDM2-220ENST00000496959 IGKV1D-39P04432 117 aa2.29□□□□□ -2.04
MDM2-220ENST00000496959 SULT1A3P0DMM9 295 aa2.29□□□□□ -2.04
MDM2-220ENST00000496959 SULT1A4P0DMN0 295 aa2.29□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 50.1 ms