RNA–Protein interactions for RNA: ENST00000496785.5

CTDSP1-213, Transcript of CTD small phosphatase 1, humanhuman

TSL 5

Gene CTDSP1, Length 460 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSP1-213ENST00000496785 C18orf15Q96N68 181 aa13.6□□□□□ -0.23
CTDSP1-213ENST00000496785 TP53TG3Q9ULZ0 132 aa13.6□□□□□ -0.23
CTDSP1-213ENST00000496785 TRAV34A0A0B4J273 112 aa13.59□□□□□ -0.23
CTDSP1-213ENST00000496785 SPINK4O60575 86 aa13.59□□□□□ -0.23
CTDSP1-213ENST00000496785 P0DMU3 169 aa13.59□□□□□ -0.23
CTDSP1-213ENST00000496785 FAM231AP0DMU4 169 aa13.59□□□□□ -0.23
CTDSP1-213ENST00000496785 FAM231CP0DMU5 169 aa13.59□□□□□ -0.23
CTDSP1-213ENST00000496785 TMEM88Q6PEY1 159 aa13.59□□□□□ -0.23
CTDSP1-213ENST00000496785 Q6ZTI0 123 aa13.59□□□□□ -0.23
CTDSP1-213ENST00000496785 LINC00479Q96M42 142 aa13.59□□□□□ -0.23
CTDSP1-213ENST00000496785 C8orf49Q96NF6 230 aa13.59□□□□□ -0.23
CTDSP1-213ENST00000496785 TXNDC17Q9BRA2 123 aa13.59□□□□□ -0.23
CTDSP1-213ENST00000496785 TRBV6-1A0A0K0K1D8 114 aa13.58□□□□□ -0.24
CTDSP1-213ENST00000496785 IFNA1P01562 189 aa13.58□□□□□ -0.24
CTDSP1-213ENST00000496785 GNG13Q9P2W3 67 aa13.57□□□□□ -0.24
CTDSP1-213ENST00000496785 FABP5P3A8MUU1 101 aa13.56□□□□□ -0.24
CTDSP1-213ENST00000496785 MDFICQ9P1T7 246 aa13.56□□□□□ -0.24
CTDSP1-213ENST00000496785 DYNC2H1Q8NCM8 4307 aaKnown RBP13.56□□□□□ -0.24
CTDSP1-213ENST00000496785 TYMSP04818 313 aa13.55□□□□□ -0.24
CTDSP1-213ENST00000496785 ZNF80P51504 273 aaPredicted RBP13.55□□□□□ -0.24
CTDSP1-213ENST00000496785 COX8CQ7Z4L0 72 aa13.55□□□□□ -0.24
CTDSP1-213ENST00000496785 MRPL16Q9NX20 251 aaKnown RBP13.55□□□□□ -0.24
CTDSP1-213ENST00000496785 IGHV3-16A0A0C4DH30 117 aa13.54□□□□□ -0.24
CTDSP1-213ENST00000496785 TAGLN2P37802 199 aaKnown RBP13.54□□□□□ -0.24
CTDSP1-213ENST00000496785 OR5I1Q13606 314 aa13.54□□□□□ -0.24
CTDSP1-213ENST00000496785 SCO2A0A1W2PP80 73 aa13.53□□□□□ -0.24
CTDSP1-213ENST00000496785 M0R2P5 195 aa13.53□□□□□ -0.24
CTDSP1-213ENST00000496785 GNRH2O43555 120 aa13.53□□□□□ -0.24
CTDSP1-213ENST00000496785 LTAP01374 205 aa13.53□□□□□ -0.24
CTDSP1-213ENST00000496785 BLOC1S1P78537 153 aa13.53□□□□□ -0.24
CTDSP1-213ENST00000496785 RASL10AQ92737 203 aa13.53□□□□□ -0.24
CTDSP1-213ENST00000496785 LYSTQ99698 3801 aa13.53□□□□□ -0.24
CTDSP1-213ENST00000496785 PLECQ15149 4684 aaKnown RBP13.53□□□□□ -0.24
CTDSP1-213ENST00000496785 H3BNG1 76 aa13.52□□□□□ -0.25
CTDSP1-213ENST00000496785 CCL20P78556 96 aa13.52□□□□□ -0.25
CTDSP1-213ENST00000496785 SLAQ13239 276 aa13.52□□□□□ -0.25
CTDSP1-213ENST00000496785 ALKAL2Q6UX46 152 aa13.52□□□□□ -0.25
CTDSP1-213ENST00000496785 UBE2DNLQ8IWF7 75 aa13.52□□□□□ -0.25
CTDSP1-213ENST00000496785 ALMS1Q8TCU4 4167 aa13.52□□□□□ -0.25
CTDSP1-213ENST00000496785 PDE6DO43924 150 aa13.51□□□□□ -0.25
CTDSP1-213ENST00000496785 NKX2-5P52952 324 aaPredicted RBP13.51□□□□□ -0.25
CTDSP1-213ENST00000496785 MEF2BQ02080 365 aaPredicted RBP13.51□□□□□ -0.25
CTDSP1-213ENST00000496785 RNF212Q495C1 297 aa13.51□□□□□ -0.25
CTDSP1-213ENST00000496785 FAM162BQ5T6X4 162 aa13.51□□□□□ -0.25
CTDSP1-213ENST00000496785 POM121L12Q8N7R1 296 aa13.51□□□□□ -0.25
CTDSP1-213ENST00000496785 C11orf52Q96A22 123 aa13.51□□□□□ -0.25
CTDSP1-213ENST00000496785 RYR2Q92736 4967 aa13.51□□□□□ -0.25
CTDSP1-213ENST00000496785 TRAV26-1A0A087WT03 109 aa13.5□□□□□ -0.25
CTDSP1-213ENST00000496785 NUDT3O95989 172 aa13.5□□□□□ -0.25
CTDSP1-213ENST00000496785 HOXA5P20719 270 aa13.5□□□□□ -0.25
CTDSP1-213ENST00000496785 S100A4P26447 101 aaKnown RBP13.5□□□□□ -0.25
CTDSP1-213ENST00000496785 ZC2HC1AQ96GY0 325 aa13.5□□□□□ -0.25
CTDSP1-213ENST00000496785 C11orf21Q9P2W6 132 aa13.5□□□□□ -0.25
CTDSP1-213ENST00000496785 RYR3Q15413 4870 aa13.49□□□□□ -0.25
CTDSP1-213ENST00000496785 ORM1P02763 201 aa13.49□□□□□ -0.25
CTDSP1-213ENST00000496785 BCL2P10415 239 aa13.49□□□□□ -0.25
CTDSP1-213ENST00000496785 ASIPP42127 132 aa13.49□□□□□ -0.25
CTDSP1-213ENST00000496785 BAGE2Q86Y30 109 aa13.49□□□□□ -0.25
CTDSP1-213ENST00000496785 VAX2Q9UIW0 290 aa13.49□□□□□ -0.25
CTDSP1-213ENST00000496785 B4DEV8 164 aa13.48□□□□□ -0.25
CTDSP1-213ENST00000496785 FAM3BP58499 235 aaPredicted RBP13.48□□□□□ -0.25
CTDSP1-213ENST00000496785 ZNF674Q2M3X9 581 aa13.48□□□□□ -0.25
CTDSP1-213ENST00000496785 PRO0255Q9UI72 69 aa13.48□□□□□ -0.25
CTDSP1-213ENST00000496785 TRAV4A0A0B4J268 109 aa13.47□□□□□ -0.25
CTDSP1-213ENST00000496785 TRGV4A0A0C4DH28 118 aa13.47□□□□□ -0.25
CTDSP1-213ENST00000496785 A0A0J9YY99 117 aa13.47□□□□□ -0.25
CTDSP1-213ENST00000496785 SH2D1AO60880 128 aa13.47□□□□□ -0.25
CTDSP1-213ENST00000496785 PTH2Q96A98 100 aa13.47□□□□□ -0.25
CTDSP1-213ENST00000496785 C9orf85Q96MD7 179 aa13.47□□□□□ -0.25
CTDSP1-213ENST00000496785 SACSQ9NZJ4 4579 aa13.47□□□□□ -0.25
CTDSP1-213ENST00000496785 IGKV3D-20A0A0C4DH25 116 aa13.46□□□□□ -0.25
CTDSP1-213ENST00000496785 CIDEAO60543 219 aa13.46□□□□□ -0.25
CTDSP1-213ENST00000496785 IGHV3-53P01767 116 aa13.46□□□□□ -0.25
CTDSP1-213ENST00000496785 RPL35P42766 123 aaKnown RBP13.46□□□□□ -0.25
CTDSP1-213ENST00000496785 CCL18P55774 89 aa13.46□□□□□ -0.25
CTDSP1-213ENST00000496785 ZNF876PQ49A33 203 aa13.46□□□□□ -0.25
CTDSP1-213ENST00000496785 OR4C5Q8NGB2 326 aa13.46□□□□□ -0.25
CTDSP1-213ENST00000496785 PAX4O43316 350 aa13.45□□□□□ -0.26
CTDSP1-213ENST00000496785 CRIP1P50238 77 aa13.45□□□□□ -0.26
CTDSP1-213ENST00000496785 LINC01559Q495D7 138 aa13.45□□□□□ -0.26
CTDSP1-213ENST00000496785 SMIM12Q96EX1 92 aa13.45□□□□□ -0.26
CTDSP1-213ENST00000496785 KRBOX1C9JBD0 128 aa13.44□□□□□ -0.26
CTDSP1-213ENST00000496785 C9JCJ5 164 aa13.44□□□□□ -0.26
CTDSP1-213ENST00000496785 M0R036 132 aa13.44□□□□□ -0.26
CTDSP1-213ENST00000496785 RNASE3P12724 160 aaKnown RBP13.44□□□□□ -0.26
CTDSP1-213ENST00000496785 PIK3CD-AS1Q5SR53 167 aa13.44□□□□□ -0.26
CTDSP1-213ENST00000496785 DNLZQ5SXM8 178 aa13.44□□□□□ -0.26
CTDSP1-213ENST00000496785 NHLRC2Q8NBF2 726 aa13.44□□□□□ -0.26
CTDSP1-213ENST00000496785 MLST8Q9BVC4 326 aa13.44□□□□□ -0.26
CTDSP1-213ENST00000496785 MED9Q9NWA0 146 aa13.44□□□□□ -0.26
CTDSP1-213ENST00000496785 IL36BQ9NZH7 164 aa13.44□□□□□ -0.26
CTDSP1-213ENST00000496785 HHLA3Q9XRX5 114 aa13.44□□□□□ -0.26
CTDSP1-213ENST00000496785 BOLA1Q9Y3E2 137 aa13.44□□□□□ -0.26
CTDSP1-213ENST00000496785 FHL2Q14192 279 aa13.43□□□□□ -0.26
CTDSP1-213ENST00000496785 MUC4Q99102 2169 aa13.43□□□□□ -0.26
CTDSP1-213ENST00000496785 ICOSQ9Y6W8 199 aa13.43□□□□□ -0.26
CTDSP1-213ENST00000496785 DNAH1Q9P2D7 4330 aa13.42□□□□□ -0.26
CTDSP1-213ENST00000496785 SFTA3P0C7M3 94 aa13.42□□□□□ -0.26
CTDSP1-213ENST00000496785 CRYBA4P53673 196 aa13.42□□□□□ -0.26
CTDSP1-213ENST00000496785 SYT8Q8NBV8 401 aa13.42□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms