RNA–Protein interactions for RNA: ENST00000494047.5

RFC4-214, Transcript of replication factor C subunit 4, humanhuman

TSL 2

Gene RFC4, Length 1,393 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC4-214ENST00000494047 LEPP41159 167 aa8.84□□□□□ -0.99
RFC4-214ENST00000494047 SPANXN1Q5VSR9 72 aa8.84□□□□□ -0.99
RFC4-214ENST00000494047 Q8TAT8 98 aa8.84□□□□□ -0.99
RFC4-214ENST00000494047 C16orf92Q96LL3 132 aa8.84□□□□□ -0.99
RFC4-214ENST00000494047 CCDC140Q96MF4 163 aa8.84□□□□□ -0.99
RFC4-214ENST00000494047 TEP1Q99973 2627 aaKnown RBP8.83□□□□□ -1
RFC4-214ENST00000494047 ZNF207O43670 478 aaKnown RBP8.83□□□□□ -1
RFC4-214ENST00000494047 PRSS1P07477 247 aa8.83□□□□□ -1
RFC4-214ENST00000494047 ZNF80P51504 273 aaPredicted RBP8.83□□□□□ -1
RFC4-214ENST00000494047 RPL32P62910 135 aaKnown RBP8.83□□□□□ -1
RFC4-214ENST00000494047 PRB3Q04118 309 aaPredicted RBP8.83□□□□□ -1
RFC4-214ENST00000494047 ODF1Q14990 250 aa8.83□□□□□ -1
RFC4-214ENST00000494047 PAPPA-AS1Q5QFB9 102 aa8.83□□□□□ -1
RFC4-214ENST00000494047 CLEC19AQ6UXS0 136 aa8.83□□□□□ -1
RFC4-214ENST00000494047 PIMREGQ9BSJ6 248 aa8.83□□□□□ -1
RFC4-214ENST00000494047 MEGF9Q9H1U4 602 aa8.83□□□□□ -1
RFC4-214ENST00000494047 CLPSL1A2RUU4 121 aa8.82□□□□□ -1
RFC4-214ENST00000494047 SMIM17P0DL12 118 aa8.82□□□□□ -1
RFC4-214ENST00000494047 FABP2P12104 132 aa8.82□□□□□ -1
RFC4-214ENST00000494047 ZFP36P26651 326 aaKnown RBP8.82□□□□□ -1
RFC4-214ENST00000494047 LMO4P61968 165 aa8.82□□□□□ -1
RFC4-214ENST00000494047 ANKRD39Q53RE8 183 aa8.82□□□□□ -1
RFC4-214ENST00000494047 C19orf54Q5BKX5 351 aa8.82□□□□□ -1
RFC4-214ENST00000494047 ADAMTSL5Q6ZMM2 481 aa8.82□□□□□ -1
RFC4-214ENST00000494047 GLMPQ8WWB7 406 aa8.82□□□□□ -1
RFC4-214ENST00000494047 AGPAT4-IT1Q9H0P7 198 aa8.82□□□□□ -1
RFC4-214ENST00000494047 DPH3P1Q9H4G8 78 aa8.82□□□□□ -1
RFC4-214ENST00000494047 S4R3C0 116 aa8.82□□□□□ -1
RFC4-214ENST00000494047 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP8.81□□□□□ -1
RFC4-214ENST00000494047 K7EP34 96 aa8.81□□□□□ -1
RFC4-214ENST00000494047 NCR2O95944 276 aa8.81□□□□□ -1
RFC4-214ENST00000494047 SMIM13P0DJ93 91 aa8.81□□□□□ -1
RFC4-214ENST00000494047 ARL3P36405 182 aa8.81□□□□□ -1
RFC4-214ENST00000494047 ASIPP42127 132 aa8.81□□□□□ -1
RFC4-214ENST00000494047 NMUP48645 174 aa8.81□□□□□ -1
RFC4-214ENST00000494047 APRG1Q8IVJ8 170 aa8.81□□□□□ -1
RFC4-214ENST00000494047 CST9LQ9H4G1 147 aa8.81□□□□□ -1
RFC4-214ENST00000494047 ACANP16112 2415 aa8.8□□□□□ -1
RFC4-214ENST00000494047 ABCA1O95477 2261 aa8.8□□□□□ -1
RFC4-214ENST00000494047 CELSR1Q9NYQ6 3014 aa8.8□□□□□ -1
RFC4-214ENST00000494047 IGLV2-18A0A075B6J9 118 aa8.8□□□□□ -1
RFC4-214ENST00000494047 A0A087WX48 190 aa8.8□□□□□ -1
RFC4-214ENST00000494047 IGHV1-69DA0A0B4J2H0 117 aa8.8□□□□□ -1
RFC4-214ENST00000494047 IGKV3D-20A0A0C4DH25 116 aa8.8□□□□□ -1
RFC4-214ENST00000494047 IGHV7-4-1A0A0J9YVY3 117 aa8.8□□□□□ -1
RFC4-214ENST00000494047 GAGE12BA1L429 117 aa8.8□□□□□ -1
RFC4-214ENST00000494047 TMEM89A2RUT3 159 aa8.8□□□□□ -1
RFC4-214ENST00000494047 IGHV3-23P01764 117 aa8.8□□□□□ -1
RFC4-214ENST00000494047 GATA3P23771 443 aa8.8□□□□□ -1
RFC4-214ENST00000494047 ID1P41134 155 aa8.8□□□□□ -1
RFC4-214ENST00000494047 RBX1P62877 108 aa8.8□□□□□ -1
RFC4-214ENST00000494047 LOXL1Q08397 574 aaPredicted RBP8.8□□□□□ -1
RFC4-214ENST00000494047 OCIAD2Q56VL3 154 aa8.8□□□□□ -1
RFC4-214ENST00000494047 AMMECR1LQ6DCA0 310 aa8.8□□□□□ -1
RFC4-214ENST00000494047 SMIM2Q9BVW6 85 aa8.8□□□□□ -1
RFC4-214ENST00000494047 MTORP42345 2549 aa8.8□□□□□ -1
RFC4-214ENST00000494047 MAP1AP78559 2803 aaPredicted RBP8.8□□□□□ -1
RFC4-214ENST00000494047 FLNAP21333 2647 aaKnown RBP8.79□□□□□ -1
RFC4-214ENST00000494047 TRAV8-2A0A0B4J237 113 aa8.79□□□□□ -1
RFC4-214ENST00000494047 CBY3A6NI87 242 aa8.79□□□□□ -1
RFC4-214ENST00000494047 H7C1H1 209 aa8.79□□□□□ -1
RFC4-214ENST00000494047 LY6HO94772 140 aa8.79□□□□□ -1
RFC4-214ENST00000494047 IGHV1-69P01742 117 aa8.79□□□□□ -1
RFC4-214ENST00000494047 TRGV3P03979 118 aa8.79□□□□□ -1
RFC4-214ENST00000494047 Q5PR19 223 aa8.79□□□□□ -1
RFC4-214ENST00000494047 TMEM158Q8WZ71 300 aa8.79□□□□□ -1
RFC4-214ENST00000494047 AJUBAQ96IF1 538 aa8.79□□□□□ -1
RFC4-214ENST00000494047 ODF3Q96PU9 254 aa8.79□□□□□ -1
RFC4-214ENST00000494047 TM2D2Q9BX73 214 aa8.79□□□□□ -1
RFC4-214ENST00000494047 TMEM238LA0A1B0GVL6 79 aa8.78□□□□□ -1
RFC4-214ENST00000494047 A6NJY4 79 aa8.78□□□□□ -1
RFC4-214ENST00000494047 F8VRH5 84 aa8.78□□□□□ -1
RFC4-214ENST00000494047 K7EMT4 169 aa8.78□□□□□ -1
RFC4-214ENST00000494047 IGHG2P01859 326 aa8.78□□□□□ -1
RFC4-214ENST00000494047 S100A4P26447 101 aaKnown RBP8.78□□□□□ -1
RFC4-214ENST00000494047 PCP4P48539 62 aa8.78□□□□□ -1
RFC4-214ENST00000494047 ATP5J2P56134 94 aa8.78□□□□□ -1
RFC4-214ENST00000494047 FOXE3Q13461 319 aa8.78□□□□□ -1
RFC4-214ENST00000494047 COTL1Q14019 142 aa8.78□□□□□ -1
RFC4-214ENST00000494047 UFSP1Q6NVU6 142 aa8.78□□□□□ -1
RFC4-214ENST00000494047 NRACQ8N912 160 aa8.78□□□□□ -1
RFC4-214ENST00000494047 WFDC11Q8NEX6 87 aa8.78□□□□□ -1
RFC4-214ENST00000494047 BPESC1Q9GZL8 116 aa8.78□□□□□ -1
RFC4-214ENST00000494047 UFC1Q9Y3C8 167 aa8.78□□□□□ -1
RFC4-214ENST00000494047 C2CD3Q4AC94 2353 aa8.78□□□□□ -1
RFC4-214ENST00000494047 A0A1W2PPM0 123 aa8.77□□□□□ -1.01
RFC4-214ENST00000494047 J3QR89 54 aa8.77□□□□□ -1.01
RFC4-214ENST00000494047 DSCR9P59020 149 aa8.77□□□□□ -1.01
RFC4-214ENST00000494047 SUMO2P61956 95 aaKnown RBP8.77□□□□□ -1.01
RFC4-214ENST00000494047 ERCC8Q13216 396 aa8.77□□□□□ -1.01
RFC4-214ENST00000494047 FAM106AQ4KMX7 169 aa8.77□□□□□ -1.01
RFC4-214ENST00000494047 LYRM7Q5U5X0 104 aa8.77□□□□□ -1.01
RFC4-214ENST00000494047 Q71RC1 249 aaPredicted RBP8.77□□□□□ -1.01
RFC4-214ENST00000494047 KRTAP1-3Q8IUG1 177 aa8.77□□□□□ -1.01
RFC4-214ENST00000494047 CHAC1Q9BUX1 264 aa8.77□□□□□ -1.01
RFC4-214ENST00000494047 HHLA3Q9XRX5 114 aa8.77□□□□□ -1.01
RFC4-214ENST00000494047 PHLDA3Q9Y5J5 127 aa8.77□□□□□ -1.01
RFC4-214ENST00000494047 ZNF469Q96JG9 3925 aaPredicted RBP8.77□□□□□ -1.01
RFC4-214ENST00000494047 PRAC2D3DTV9 90 aa8.76□□□□□ -1.01
RFC4-214ENST00000494047 SMKR1H3BMG3 65 aa8.76□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 85.3 ms