RNA–Protein interactions for RNA: ENST00000493758.5

ITGB1-216, Transcript of integrin subunit beta 1, humanhuman

TSL 3

Gene ITGB1, Length 366 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-216ENST00000493758 LAMB1P07942 1786 aa0.52□□□□□ -2.33
ITGB1-216ENST00000493758 FAM159BA6NKW6 160 aa0.51□□□□□ -2.33
ITGB1-216ENST00000493758 LOC285556D6RIA3 1793 aa0.51□□□□□ -2.33
ITGB1-216ENST00000493758 INE1O15225 51 aa0.51□□□□□ -2.33
ITGB1-216ENST00000493758 NDUFB3O43676 98 aa0.51□□□□□ -2.33
ITGB1-216ENST00000493758 CST8O60676 142 aa0.51□□□□□ -2.33
ITGB1-216ENST00000493758 TIMM17BO60830 172 aa0.51□□□□□ -2.33
ITGB1-216ENST00000493758 DHFRP00374 187 aa0.51□□□□□ -2.33
ITGB1-216ENST00000493758 CST2P09228 141 aa0.51□□□□□ -2.33
ITGB1-216ENST00000493758 HSD11B1P28845 292 aa0.51□□□□□ -2.33
ITGB1-216ENST00000493758 ATP5G3P48201 142 aa0.51□□□□□ -2.33
ITGB1-216ENST00000493758 CNBPP62633 177 aaKnown RBP0.51□□□□□ -2.33
ITGB1-216ENST00000493758 DYNLT1P63172 113 aa0.51□□□□□ -2.33
ITGB1-216ENST00000493758 MYL5Q02045 173 aa0.51□□□□□ -2.33
ITGB1-216ENST00000493758 MPV17LQ2QL34 196 aa0.51□□□□□ -2.33
ITGB1-216ENST00000493758 FAM74A1Q5RGS3 127 aa0.51□□□□□ -2.33
ITGB1-216ENST00000493758 C2orf82Q6UX34 121 aa0.51□□□□□ -2.33
ITGB1-216ENST00000493758 SOSTDC1Q6X4U4 206 aa0.51□□□□□ -2.33
ITGB1-216ENST00000493758 GOLT1AQ6ZVE7 132 aa0.51□□□□□ -2.33
ITGB1-216ENST00000493758 ST6GALNAC3Q8NDV1 305 aa0.51□□□□□ -2.33
ITGB1-216ENST00000493758 STAG3L4Q8TBR4 150 aa0.51□□□□□ -2.33
ITGB1-216ENST00000493758 PHIPQ8WWQ0 1821 aa0.51□□□□□ -2.33
ITGB1-216ENST00000493758 BORCS5Q969J3 196 aa0.51□□□□□ -2.33
ITGB1-216ENST00000493758 TMEM133Q9H2Q1 129 aa0.51□□□□□ -2.33
ITGB1-216ENST00000493758 KIAA1107Q9UPP5 1409 aa0.51□□□□□ -2.33
ITGB1-216ENST00000493758 AKAP6Q13023 2319 aa0.5□□□□□ -2.33
ITGB1-216ENST00000493758 TNXBP22105 4242 aa0.5□□□□□ -2.33
ITGB1-216ENST00000493758 ATG2AQ2TAZ0 1938 aa0.5□□□□□ -2.33
ITGB1-216ENST00000493758 SIP14410 1827 aa0.5□□□□□ -2.33
ITGB1-216ENST00000493758 BCORQ6W2J9 1755 aa0.5□□□□□ -2.33
ITGB1-216ENST00000493758 CDC42BPAQ5VT25 1732 aa0.5□□□□□ -2.33
ITGB1-216ENST00000493758 PIK3C2BO00750 1634 aa0.5□□□□□ -2.33
ITGB1-216ENST00000493758 MRC1P22897 1456 aa0.5□□□□□ -2.33
ITGB1-216ENST00000493758 CASKIN1Q8WXD9 1431 aa0.5□□□□□ -2.33
ITGB1-216ENST00000493758 TCRBV4S1A1TA0A5B7 111 aa0.5□□□□□ -2.33
ITGB1-216ENST00000493758 A8MWV9 139 aa0.5□□□□□ -2.33
ITGB1-216ENST00000493758 TAX1BP3O14907 124 aa0.5□□□□□ -2.33
ITGB1-216ENST00000493758 GGCTO75223 188 aaKnown RBP0.5□□□□□ -2.33
ITGB1-216ENST00000493758 ATP5HO75947 161 aa0.5□□□□□ -2.33
ITGB1-216ENST00000493758 DNAL4O96015 105 aa0.5□□□□□ -2.33
ITGB1-216ENST00000493758 ZNF25P17030 456 aaPredicted RBP0.5□□□□□ -2.33
ITGB1-216ENST00000493758 RNASE4P34096 147 aaKnown RBP0.5□□□□□ -2.33
ITGB1-216ENST00000493758 UBE2BP63146 152 aa0.5□□□□□ -2.33
ITGB1-216ENST00000493758 MRPS15P82914 257 aaKnown RBP0.5□□□□□ -2.33
ITGB1-216ENST00000493758 TAF1AQ15573 450 aaPredicted RBP0.5□□□□□ -2.33
ITGB1-216ENST00000493758 C22orf39Q6P5X5 142 aa0.5□□□□□ -2.33
ITGB1-216ENST00000493758 PDZD9Q8IXQ8 264 aa0.5□□□□□ -2.33
ITGB1-216ENST00000493758 CEP19Q96LK0 163 aa0.5□□□□□ -2.33
ITGB1-216ENST00000493758 SLC25A21Q9BQT8 299 aaPredicted RBP0.5□□□□□ -2.33
ITGB1-216ENST00000493758 ARMC1Q9NVT9 282 aa0.5□□□□□ -2.33
ITGB1-216ENST00000493758 ARL5AQ9Y689 179 aa0.5□□□□□ -2.33
ITGB1-216ENST00000493758 LY96Q9Y6Y9 160 aa0.5□□□□□ -2.33
ITGB1-216ENST00000493758 SPAG17Q6Q759 2223 aa0.5□□□□□ -2.33
ITGB1-216ENST00000493758 ZNF106Q9H2Y7 1883 aaKnown RBP0.5□□□□□ -2.33
ITGB1-216ENST00000493758 DNAH11Q96DT5 4516 aa0.5□□□□□ -2.33
ITGB1-216ENST00000493758 NRXN2Q9P2S2 1712 aa0.5□□□□□ -2.33
ITGB1-216ENST00000493758 E9PCH4 1651 aa0.49□□□□□ -2.33
ITGB1-216ENST00000493758 SCN7AQ01118 1682 aa0.49□□□□□ -2.33
ITGB1-216ENST00000493758 CDC42BPGQ6DT37 1551 aa0.49□□□□□ -2.33
ITGB1-216ENST00000493758 ABCC6O95255 1503 aa0.49□□□□□ -2.33
ITGB1-216ENST00000493758 TMEM2Q9UHN6 1383 aa0.49□□□□□ -2.33
ITGB1-216ENST00000493758 EXPH5Q8NEV8 1989 aa0.49□□□□□ -2.33
ITGB1-216ENST00000493758 LPAP08519 4548 aa0.49□□□□□ -2.33
ITGB1-216ENST00000493758 BANF1O75531 89 aa0.49□□□□□ -2.33
ITGB1-216ENST00000493758 NDUFC2O95298 119 aa0.49□□□□□ -2.33
ITGB1-216ENST00000493758 HSPE1P61604 102 aaKnown RBP0.49□□□□□ -2.33
ITGB1-216ENST00000493758 LELP1Q5T871 98 aa0.49□□□□□ -2.33
ITGB1-216ENST00000493758 EIF5AL1Q6IS14 154 aaKnown RBP0.49□□□□□ -2.33
ITGB1-216ENST00000493758 Q8IYB0 196 aa0.49□□□□□ -2.33
ITGB1-216ENST00000493758 CANT1Q8WVQ1 401 aa0.49□□□□□ -2.33
ITGB1-216ENST00000493758 TP53RKQ96S44 253 aa0.49□□□□□ -2.33
ITGB1-216ENST00000493758 AMELYQ99218 206 aa0.49□□□□□ -2.33
ITGB1-216ENST00000493758 TMEM126AQ9H061 195 aa0.49□□□□□ -2.33
ITGB1-216ENST00000493758 TMEM14CQ9P0S9 112 aa0.49□□□□□ -2.33
ITGB1-216ENST00000493758 PYCARDQ9ULZ3 195 aa0.49□□□□□ -2.33
ITGB1-216ENST00000493758 AFDNP55196 1824 aaKnown RBP0.49□□□□□ -2.33
ITGB1-216ENST00000493758 TNRC6BQ9UPQ9 1833 aaKnown RBP0.49□□□□□ -2.33
ITGB1-216ENST00000493758 CEP152O94986 1710 aa0.49□□□□□ -2.33
ITGB1-216ENST00000493758 DOCK3Q8IZD9 2030 aa0.48□□□□□ -2.33
ITGB1-216ENST00000493758 PLXND1Q9Y4D7 1925 aa0.48□□□□□ -2.33
ITGB1-216ENST00000493758 HRNRQ86YZ3 2850 aaPredicted RBP0.48□□□□□ -2.33
ITGB1-216ENST00000493758 TNS3Q68CZ2 1445 aa0.48□□□□□ -2.33
ITGB1-216ENST00000493758 PLXNA4Q9HCM2 1894 aa0.48□□□□□ -2.33
ITGB1-216ENST00000493758 TRBV6-4A0A1B0GX49 114 aa0.48□□□□□ -2.33
ITGB1-216ENST00000493758 G3V2T6 193 aa0.48□□□□□ -2.33
ITGB1-216ENST00000493758 AIPO00170 330 aa0.48□□□□□ -2.33
ITGB1-216ENST00000493758 NCR3O14931 201 aa0.48□□□□□ -2.33
ITGB1-216ENST00000493758 CCL25O15444 150 aa0.48□□□□□ -2.33
ITGB1-216ENST00000493758 CCL16O15467 120 aa0.48□□□□□ -2.33
ITGB1-216ENST00000493758 ATG12O94817 140 aa0.48□□□□□ -2.33
ITGB1-216ENST00000493758 KRTAP2-3P0C7H8 128 aa0.48□□□□□ -2.33
ITGB1-216ENST00000493758 CAPZBP47756 277 aa0.48□□□□□ -2.33
ITGB1-216ENST00000493758 NCALDP61601 193 aa0.48□□□□□ -2.33
ITGB1-216ENST00000493758 SCGB2B2Q4G0G5 96 aa0.48□□□□□ -2.33
ITGB1-216ENST00000493758 C4orf22Q6V702 233 aa0.48□□□□□ -2.33
ITGB1-216ENST00000493758 KRTAP19-3Q7Z4W3 81 aa0.48□□□□□ -2.33
ITGB1-216ENST00000493758 S100A7AQ86SG5 101 aa0.48□□□□□ -2.33
ITGB1-216ENST00000493758 GKN2Q86XP6 184 aa0.48□□□□□ -2.33
ITGB1-216ENST00000493758 IFT20Q8IY31 132 aa0.48□□□□□ -2.33
ITGB1-216ENST00000493758 PXT1Q8NFP0 134 aa0.48□□□□□ -2.33
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms