RNA–Protein interactions for RNA: ENST00000492859.5

BRCA1-220, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 1,584 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-220ENST00000492859 IGHV3-16A0A0C4DH30 117 aa2.99□□□□□ -1.93
BRCA1-220ENST00000492859 H7BZZ5 65 aa2.99□□□□□ -1.93
BRCA1-220ENST00000492859 NTN3O00634 580 aaPredicted RBP2.99□□□□□ -1.93
BRCA1-220ENST00000492859 ACYP1P07311 99 aa2.99□□□□□ -1.93
BRCA1-220ENST00000492859 CCL5P13501 91 aa2.99□□□□□ -1.93
BRCA1-220ENST00000492859 SLURP1P55000 103 aa2.99□□□□□ -1.93
BRCA1-220ENST00000492859 CMC4P56277 68 aaPredicted RBP2.99□□□□□ -1.93
BRCA1-220ENST00000492859 TSPEAR-AS2P59090 65 aa2.99□□□□□ -1.93
BRCA1-220ENST00000492859 KLF9Q13886 244 aaPredicted RBP2.99□□□□□ -1.93
BRCA1-220ENST00000492859 CASC10Q5T4H9 136 aa2.99□□□□□ -1.93
BRCA1-220ENST00000492859 FAM53AQ6NSI3 398 aaPredicted RBP2.99□□□□□ -1.93
BRCA1-220ENST00000492859 Q6P435 159 aa2.99□□□□□ -1.93
BRCA1-220ENST00000492859 CYP2G1PQ6ZSU1 146 aa2.99□□□□□ -1.93
BRCA1-220ENST00000492859 LINC00643Q86TS7 51 aa2.99□□□□□ -1.93
BRCA1-220ENST00000492859 MRPL35Q9NZE8 188 aaKnown RBP2.99□□□□□ -1.93
BRCA1-220ENST00000492859 PHLDA3Q9Y5J5 127 aa2.99□□□□□ -1.93
BRCA1-220ENST00000492859 ANKRD36A6QL64 1941 aa2.99□□□□□ -1.93
BRCA1-220ENST00000492859 USP32Q8NFA0 1604 aa2.99□□□□□ -1.93
BRCA1-220ENST00000492859 ZNF407Q9C0G0 2248 aa2.98□□□□□ -1.93
BRCA1-220ENST00000492859 LTBP2Q14767 1821 aa2.98□□□□□ -1.93
BRCA1-220ENST00000492859 TNS1Q9HBL0 1735 aaKnown RBP2.98□□□□□ -1.93
BRCA1-220ENST00000492859 IGHV4OR15-8A0A075B7B6 117 aa2.98□□□□□ -1.93
BRCA1-220ENST00000492859 IGHV5-51A0A0C4DH38 117 aa2.98□□□□□ -1.93
BRCA1-220ENST00000492859 A0A1W2PS18 150 aa2.98□□□□□ -1.93
BRCA1-220ENST00000492859 FXYD1O00168 92 aa2.98□□□□□ -1.93
BRCA1-220ENST00000492859 IGLV2-23P01705 113 aa2.98□□□□□ -1.93
BRCA1-220ENST00000492859 CCL3P10147 92 aa2.98□□□□□ -1.93
BRCA1-220ENST00000492859 ZNF56Q15929 161 aa2.98□□□□□ -1.93
BRCA1-220ENST00000492859 LPAL2Q16609 132 aa2.98□□□□□ -1.93
BRCA1-220ENST00000492859 ASB16-AS1Q495Z4 193 aa2.98□□□□□ -1.93
BRCA1-220ENST00000492859 MRPL51Q4U2R6 128 aaKnown RBP2.98□□□□□ -1.93
BRCA1-220ENST00000492859 FAM72AQ5TYM5 149 aa2.98□□□□□ -1.93
BRCA1-220ENST00000492859 CHCHD1Q96BP2 118 aaKnown RBP2.98□□□□□ -1.93
BRCA1-220ENST00000492859 ZNF524Q96C55 264 aa2.98□□□□□ -1.93
BRCA1-220ENST00000492859 SCGB3A1Q96QR1 104 aa2.98□□□□□ -1.93
BRCA1-220ENST00000492859 FAM103A1Q9BTL3 118 aaKnown RBP2.98□□□□□ -1.93
BRCA1-220ENST00000492859 ARL2-SNX15V9GYD0 113 aa2.98□□□□□ -1.93
BRCA1-220ENST00000492859 GBF1Q92538 1859 aa2.98□□□□□ -1.93
BRCA1-220ENST00000492859 NOTCH4Q99466 2003 aa2.98□□□□□ -1.93
BRCA1-220ENST00000492859 LCTP09848 1927 aa2.98□□□□□ -1.93
BRCA1-220ENST00000492859 ARHGEF5Q12774 1597 aa2.98□□□□□ -1.93
BRCA1-220ENST00000492859 SVILO95425 2214 aa2.97□□□□□ -1.93
BRCA1-220ENST00000492859 CPAMD8Q8IZJ3 1885 aa2.97□□□□□ -1.93
BRCA1-220ENST00000492859 NEXMIFQ5QGS0 1516 aa2.97□□□□□ -1.93
BRCA1-220ENST00000492859 IGHV4-30-2A0A087WSY4 118 aa2.97□□□□□ -1.93
BRCA1-220ENST00000492859 A0A087X002 238 aa2.97□□□□□ -1.93
BRCA1-220ENST00000492859 IGHV1-24A0A0C4DH33 117 aa2.97□□□□□ -1.93
BRCA1-220ENST00000492859 TCRBV4S1A1TA0A5B7 111 aa2.97□□□□□ -1.93
BRCA1-220ENST00000492859 PIPP12273 146 aaPredicted RBP2.97□□□□□ -1.93
BRCA1-220ENST00000492859 NPPCP23582 126 aa2.97□□□□□ -1.93
BRCA1-220ENST00000492859 RPL27AP46776 148 aaKnown RBP2.97□□□□□ -1.93
BRCA1-220ENST00000492859 ZNF791Q3KP31 576 aaPredicted RBP2.97□□□□□ -1.93
BRCA1-220ENST00000492859 C9orf66Q5T8R8 295 aa2.97□□□□□ -1.93
BRCA1-220ENST00000492859 SUMO4Q6EEV6 95 aa2.97□□□□□ -1.93
BRCA1-220ENST00000492859 LYPD2Q6UXB3 125 aa2.97□□□□□ -1.93
BRCA1-220ENST00000492859 ADM2Q7Z4H4 148 aa2.97□□□□□ -1.93
BRCA1-220ENST00000492859 ORMDL3Q8N138 153 aa2.97□□□□□ -1.93
BRCA1-220ENST00000492859 LINC00269Q8N2A0 174 aa2.97□□□□□ -1.93
BRCA1-220ENST00000492859 ZFAND2AQ8N6M9 145 aa2.97□□□□□ -1.93
BRCA1-220ENST00000492859 NUP37Q8NFH4 326 aa2.97□□□□□ -1.93
BRCA1-220ENST00000492859 MPLKIPQ8TAP9 179 aa2.97□□□□□ -1.93
BRCA1-220ENST00000492859 C11orf1Q9H5F2 150 aa2.97□□□□□ -1.93
BRCA1-220ENST00000492859 XAGE1AQ9HD64 81 aa2.97□□□□□ -1.93
BRCA1-220ENST00000492859 COL4A6Q14031 1691 aa2.96□□□□□ -1.93
BRCA1-220ENST00000492859 IGHV3-43A0A0B4J1X8 118 aa2.96□□□□□ -1.94
BRCA1-220ENST00000492859 TRAV13-2A0A0B4J235 113 aa2.96□□□□□ -1.94
BRCA1-220ENST00000492859 LY6G6EA0A0G2JKS1 128 aa2.96□□□□□ -1.94
BRCA1-220ENST00000492859 LOC285095A0A1B0GVY8 99 aa2.96□□□□□ -1.94
BRCA1-220ENST00000492859 C2orf70A6NJV1 201 aa2.96□□□□□ -1.94
BRCA1-220ENST00000492859 SRRM5B3KS81 715 aa2.96□□□□□ -1.94
BRCA1-220ENST00000492859 C11orf94C9JXX5 98 aa2.96□□□□□ -1.94
BRCA1-220ENST00000492859 GNRH2O43555 120 aa2.96□□□□□ -1.94
BRCA1-220ENST00000492859 NDUFC1O43677 76 aa2.96□□□□□ -1.94
BRCA1-220ENST00000492859 CPSF4O95639 269 aaKnown RBP2.96□□□□□ -1.94
BRCA1-220ENST00000492859 IGHV3-11P01762 117 aa2.96□□□□□ -1.94
BRCA1-220ENST00000492859 ESRGQ1W209 222 aa2.96□□□□□ -1.94
BRCA1-220ENST00000492859 DEFB121Q5J5C9 76 aa2.96□□□□□ -1.94
BRCA1-220ENST00000492859 SDIM1Q6ZPB5 146 aa2.96□□□□□ -1.94
BRCA1-220ENST00000492859 C6orf201Q7Z4U5 140 aa2.96□□□□□ -1.94
BRCA1-220ENST00000492859 ZNF575Q86XF7 245 aa2.96□□□□□ -1.94
BRCA1-220ENST00000492859 FAM223AQ8IWN6 122 aa2.96□□□□□ -1.94
BRCA1-220ENST00000492859 NPBQ8NG41 125 aa2.96□□□□□ -1.94
BRCA1-220ENST00000492859 PFN4Q8NHR9 129 aa2.96□□□□□ -1.94
BRCA1-220ENST00000492859 LINC00597Q9H2U6 94 aa2.96□□□□□ -1.94
BRCA1-220ENST00000492859 C8orf17Q9NRJ1 99 aa2.96□□□□□ -1.94
BRCA1-220ENST00000492859 DHRS4-AS1Q9P1J3 65 aa2.96□□□□□ -1.94
BRCA1-220ENST00000492859 EML5Q05BV3 1969 aa2.96□□□□□ -1.94
BRCA1-220ENST00000492859 GCC2Q8IWJ2 1684 aa2.96□□□□□ -1.94
BRCA1-220ENST00000492859 IGLV4-3A0A075B6K6 122 aa2.95□□□□□ -1.94
BRCA1-220ENST00000492859 A0A087WW49 117 aa2.95□□□□□ -1.94
BRCA1-220ENST00000492859 IGKV6D-41A0A0C4DH26 115 aa2.95□□□□□ -1.94
BRCA1-220ENST00000492859 GCHFRP30047 84 aa2.95□□□□□ -1.94
BRCA1-220ENST00000492859 CYCSP99999 105 aaKnown RBP2.95□□□□□ -1.94
BRCA1-220ENST00000492859 SYCNQ0VAF6 134 aa2.95□□□□□ -1.94
BRCA1-220ENST00000492859 RETNLBQ9BQ08 111 aa2.95□□□□□ -1.94
BRCA1-220ENST00000492859 NDUFA12Q9UI09 145 aa2.95□□□□□ -1.94
BRCA1-220ENST00000492859 SCN3AQ9NY46 2000 aa2.95□□□□□ -1.94
BRCA1-220ENST00000492859 ATP7AQ04656 1500 aa2.95□□□□□ -1.94
BRCA1-220ENST00000492859 MYO16Q9Y6X6 1858 aa2.95□□□□□ -1.94
BRCA1-220ENST00000492859 PKD1L3Q7Z443 1732 aa2.95□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 52.4 ms