RNA–Protein interactions for RNA: ENST00000492386.5

SEMA4D-220, Transcript of semaphorin 4D, humanhuman

TSL 2

Gene SEMA4D, Length 2,396 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA4D-220ENST00000492386 ITPR1Q14643 2758 aa12.24□□□□□ -0.45
SEMA4D-220ENST00000492386 CHD8Q9HCK8 2581 aa12.24□□□□□ -0.45
SEMA4D-220ENST00000492386 TRAV40A0A0B4J280 105 aa12.24□□□□□ -0.45
SEMA4D-220ENST00000492386 A0A0G2JLM5 398 aa12.24□□□□□ -0.45
SEMA4D-220ENST00000492386 MRAP2Q96G30 205 aa12.24□□□□□ -0.45
SEMA4D-220ENST00000492386 AP1S3Q96PC3 154 aa12.24□□□□□ -0.45
SEMA4D-220ENST00000492386 NAA38Q9BRA0 125 aaKnown RBP12.24□□□□□ -0.45
SEMA4D-220ENST00000492386 MEGF9Q9H1U4 602 aa12.24□□□□□ -0.45
SEMA4D-220ENST00000492386 J3KRW8 73 aa12.23□□□□□ -0.45
SEMA4D-220ENST00000492386 RNF151Q2KHN1 245 aa12.23□□□□□ -0.45
SEMA4D-220ENST00000492386 ZC2HC1BQ5TFG8 222 aa12.23□□□□□ -0.45
SEMA4D-220ENST00000492386 MRPL35Q9NZE8 188 aaKnown RBP12.23□□□□□ -0.45
SEMA4D-220ENST00000492386 DEFB1P60022 68 aa12.23□□□□□ -0.45
SEMA4D-220ENST00000492386 SRSF1Q07955 248 aaKnown RBP eCLIP12.23□□□□□ -0.45
SEMA4D-220ENST00000492386 TM4SF20Q53R12 229 aa12.23□□□□□ -0.45
SEMA4D-220ENST00000492386 MYOZ3Q8TDC0 251 aa12.23□□□□□ -0.45
SEMA4D-220ENST00000492386 OR10J6PQ8NGY7 276 aa12.22□□□□□ -0.45
SEMA4D-220ENST00000492386 RAB37Q96AX2 223 aa12.22□□□□□ -0.45
SEMA4D-220ENST00000492386 CELSR1Q9NYQ6 3014 aa12.22□□□□□ -0.45
SEMA4D-220ENST00000492386 IGHV4-61A0A0C4DH41 118 aa12.22□□□□□ -0.45
SEMA4D-220ENST00000492386 K7EP34 96 aa12.22□□□□□ -0.45
SEMA4D-220ENST00000492386 OVOL1O14753 267 aa12.22□□□□□ -0.45
SEMA4D-220ENST00000492386 GTF2H5Q6ZYL4 71 aa12.22□□□□□ -0.45
SEMA4D-220ENST00000492386 CHAC1Q9BUX1 264 aa12.22□□□□□ -0.45
SEMA4D-220ENST00000492386 SMIM2Q9BVW6 85 aa12.22□□□□□ -0.45
SEMA4D-220ENST00000492386 TMEM160Q9NX00 188 aa12.22□□□□□ -0.45
SEMA4D-220ENST00000492386 TRBV25-1A0A075B6N4 114 aa12.21□□□□□ -0.45
SEMA4D-220ENST00000492386 A0A087WX48 190 aa12.21□□□□□ -0.45
SEMA4D-220ENST00000492386 SPRY2O43597 315 aa12.21□□□□□ -0.45
SEMA4D-220ENST00000492386 HLA-DRB4P13762 266 aa12.21□□□□□ -0.45
SEMA4D-220ENST00000492386 FAM19A4Q96LR4 140 aa12.21□□□□□ -0.45
SEMA4D-220ENST00000492386 HLA-DRB4X5D2U9 266 aa12.21□□□□□ -0.45
SEMA4D-220ENST00000492386 TRAV21A0A0B4J279 112 aa12.21□□□□□ -0.46
SEMA4D-220ENST00000492386 BRI3O95415 125 aa12.21□□□□□ -0.46
SEMA4D-220ENST00000492386 IGHV4-38-2P0DP08 117 aa12.21□□□□□ -0.46
SEMA4D-220ENST00000492386 FXYD2P54710 66 aa12.21□□□□□ -0.46
SEMA4D-220ENST00000492386 LY6EQ16553 131 aa12.21□□□□□ -0.46
SEMA4D-220ENST00000492386 SPTAN1Q13813 2472 aaKnown RBP12.2□□□□□ -0.46
SEMA4D-220ENST00000492386 M0R381 172 aa12.2□□□□□ -0.46
SEMA4D-220ENST00000492386 IGHV3-11P01762 117 aa12.2□□□□□ -0.46
SEMA4D-220ENST00000492386 IGHG2P01859 326 aa12.2□□□□□ -0.46
SEMA4D-220ENST00000492386 GNLYP22749 145 aa12.2□□□□□ -0.46
SEMA4D-220ENST00000492386 USMG5Q96IX5 58 aa12.2□□□□□ -0.46
SEMA4D-220ENST00000492386 KLK15Q9H2R5 256 aa12.2□□□□□ -0.46
SEMA4D-220ENST00000492386 GCSHP23434 173 aa12.2□□□□□ -0.46
SEMA4D-220ENST00000492386 RASL10AQ92737 203 aa12.2□□□□□ -0.46
SEMA4D-220ENST00000492386 A0A1W2PPM0 123 aa12.19□□□□□ -0.46
SEMA4D-220ENST00000492386 H3BUA1 57 aa12.19□□□□□ -0.46
SEMA4D-220ENST00000492386 ANXA2RQ3ZCQ2 193 aa12.19□□□□□ -0.46
SEMA4D-220ENST00000492386 ASIPP42127 132 aa12.19□□□□□ -0.46
SEMA4D-220ENST00000492386 APRG1Q8IVJ8 170 aa12.19□□□□□ -0.46
SEMA4D-220ENST00000492386 PIMREGQ9BSJ6 248 aa12.19□□□□□ -0.46
SEMA4D-220ENST00000492386 A6NDX4 124 aa12.18□□□□□ -0.46
SEMA4D-220ENST00000492386 F6UB75 175 aa12.18□□□□□ -0.46
SEMA4D-220ENST00000492386 H3BUX3 64 aa12.18□□□□□ -0.46
SEMA4D-220ENST00000492386 SMIM13P0DJ93 91 aa12.18□□□□□ -0.46
SEMA4D-220ENST00000492386 SUMO2P61956 95 aaKnown RBP12.18□□□□□ -0.46
SEMA4D-220ENST00000492386 MAPKAPK5-AS1Q8N8E1 139 aa12.18□□□□□ -0.46
SEMA4D-220ENST00000492386 DPH3P1Q9H4G8 78 aa12.18□□□□□ -0.46
SEMA4D-220ENST00000492386 SELENOKQ9Y6D0 94 aa12.18□□□□□ -0.46
SEMA4D-220ENST00000492386 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP12.18□□□□□ -0.46
SEMA4D-220ENST00000492386 S100A4P26447 101 aaKnown RBP12.18□□□□□ -0.46
SEMA4D-220ENST00000492386 C14orf178Q8N769 122 aaPredicted RBP12.18□□□□□ -0.46
SEMA4D-220ENST00000492386 C10orf105Q8TEF2 133 aa12.18□□□□□ -0.46
SEMA4D-220ENST00000492386 PRORYQ9H606 182 aa12.18□□□□□ -0.46
SEMA4D-220ENST00000492386 TRAV12-1A0A0B4J245 112 aa12.17□□□□□ -0.46
SEMA4D-220ENST00000492386 RNF223E7ERA6 249 aa12.17□□□□□ -0.46
SEMA4D-220ENST00000492386 PLNP26678 52 aa12.17□□□□□ -0.46
SEMA4D-220ENST00000492386 RNASE4P34096 147 aaKnown RBP12.17□□□□□ -0.46
SEMA4D-220ENST00000492386 RPL11P62913 178 aaKnown RBP12.17□□□□□ -0.46
SEMA4D-220ENST00000492386 BLCAPP62952 87 aa12.17□□□□□ -0.46
SEMA4D-220ENST00000492386 Q6ZS46 218 aa12.17□□□□□ -0.46
SEMA4D-220ENST00000492386 RPL39LQ96EH5 51 aaKnown RBP12.17□□□□□ -0.46
SEMA4D-220ENST00000492386 C20orf78Q9BR46 151 aa12.17□□□□□ -0.46
SEMA4D-220ENST00000492386 PHLDA3Q9Y5J5 127 aa12.17□□□□□ -0.46
SEMA4D-220ENST00000492386 MED14OSP0DP75 135 aa12.16□□□□□ -0.46
SEMA4D-220ENST00000492386 PF4V1P10720 104 aa12.16□□□□□ -0.46
SEMA4D-220ENST00000492386 ORMDL2Q53FV1 153 aa12.16□□□□□ -0.46
SEMA4D-220ENST00000492386 LCNL1Q6ZST4 164 aa12.16□□□□□ -0.46
SEMA4D-220ENST00000492386 TM2D2Q9BX73 214 aa12.16□□□□□ -0.46
SEMA4D-220ENST00000492386 PHLDA1Q8WV24 401 aaPredicted RBP12.16□□□□□ -0.46
SEMA4D-220ENST00000492386 TOMM6Q96B49 74 aa12.16□□□□□ -0.46
SEMA4D-220ENST00000492386 RHPN1-AS1Q9BWJ2 59 aa12.16□□□□□ -0.46
SEMA4D-220ENST00000492386 SPCS1Q9Y6A9 102 aa12.16□□□□□ -0.46
SEMA4D-220ENST00000492386 VPS13CQ709C8 3753 aa12.16□□□□□ -0.46
SEMA4D-220ENST00000492386 GNRH2O43555 120 aa12.15□□□□□ -0.46
SEMA4D-220ENST00000492386 RNASE3P12724 160 aaKnown RBP12.15□□□□□ -0.46
SEMA4D-220ENST00000492386 CEND1Q8N111 149 aa12.15□□□□□ -0.46
SEMA4D-220ENST00000492386 IGKV3-7A0A075B6H7 116 aa12.15□□□□□ -0.46
SEMA4D-220ENST00000492386 F8VRH5 84 aa12.15□□□□□ -0.46
SEMA4D-220ENST00000492386 H7C1H1 209 aa12.15□□□□□ -0.46
SEMA4D-220ENST00000492386 K7ERJ3 54 aa12.15□□□□□ -0.46
SEMA4D-220ENST00000492386 K7ERU9 68 aa12.15□□□□□ -0.46
SEMA4D-220ENST00000492386 IGLV1-40P01703 118 aa12.15□□□□□ -0.46
SEMA4D-220ENST00000492386 SLC25A16P16260 332 aa12.15□□□□□ -0.46
SEMA4D-220ENST00000492386 SAMD5Q5TGI4 173 aa12.15□□□□□ -0.46
SEMA4D-220ENST00000492386 VPS25Q9BRG1 176 aa12.15□□□□□ -0.46
SEMA4D-220ENST00000492386 TRBV7-9A0A0J9YWB2 115 aa12.14□□□□□ -0.47
SEMA4D-220ENST00000492386 SCGB3A1Q96QR1 104 aa12.14□□□□□ -0.47
SEMA4D-220ENST00000492386 SPOCK3Q9BQ16 436 aa12.14□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 66.9 ms