RNA–Protein interactions for RNA: ENST00000488908.1

CCDC93-209, Transcript of coiled-coil domain containing 93, humanhuman

TSL 5

Gene CCDC93, Length 268 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC93-209ENST00000488908 PKHD1P08F94 4074 aa-0.65□□□□□ -2.51
CCDC93-209ENST00000488908 SRCAPQ6ZRS2 3230 aa-0.65□□□□□ -2.51
CCDC93-209ENST00000488908 VPS13DQ5THJ4 4388 aa-0.65□□□□□ -2.51
CCDC93-209ENST00000488908 TMEM30CPA0ZSE6 113 aa-0.65□□□□□ -2.51
CCDC93-209ENST00000488908 RIIAD1A6NNX1 92 aa-0.65□□□□□ -2.51
CCDC93-209ENST00000488908 C5orf58C9J3I9 102 aa-0.65□□□□□ -2.51
CCDC93-209ENST00000488908 MT-ND6P03923 174 aa-0.65□□□□□ -2.51
CCDC93-209ENST00000488908 PRM1P04553 51 aa-0.65□□□□□ -2.51
CCDC93-209ENST00000488908 DEFA5Q01523 94 aa-0.65□□□□□ -2.51
CCDC93-209ENST00000488908 SNCBQ16143 134 aa-0.65□□□□□ -2.51
CCDC93-209ENST00000488908 AKIRIN2Q53H80 203 aa-0.65□□□□□ -2.51
CCDC93-209ENST00000488908 PPP1R1CQ8WVI7 109 aa-0.65□□□□□ -2.51
CCDC93-209ENST00000488908 DMAC1Q96GE9 116 aa-0.65□□□□□ -2.51
CCDC93-209ENST00000488908 PYCARDQ9ULZ3 195 aa-0.65□□□□□ -2.51
CCDC93-209ENST00000488908 SLC22A13Q9Y226 551 aa-0.65□□□□□ -2.51
CCDC93-209ENST00000488908 PKDREJQ9NTG1 2253 aa-0.65□□□□□ -2.51
CCDC93-209ENST00000488908 CFAP46Q8IYW2 2715 aa-0.65□□□□□ -2.51
CCDC93-209ENST00000488908 LAMC1P11047 1609 aa-0.65□□□□□ -2.51
CCDC93-209ENST00000488908 F5P12259 2224 aa-0.65□□□□□ -2.51
CCDC93-209ENST00000488908 DNAH2Q9P225 4427 aa-0.65□□□□□ -2.51
CCDC93-209ENST00000488908 UTP20O75691 2785 aaKnown RBP-0.66□□□□□ -2.51
CCDC93-209ENST00000488908 ADCY9O60503 1353 aa-0.66□□□□□ -2.51
CCDC93-209ENST00000488908 G3V2T6 193 aa-0.66□□□□□ -2.52
CCDC93-209ENST00000488908 H7C1C5 153 aa-0.66□□□□□ -2.52
CCDC93-209ENST00000488908 TPST1O60507 370 aa-0.66□□□□□ -2.52
CCDC93-209ENST00000488908 CST2P09228 141 aa-0.66□□□□□ -2.52
CCDC93-209ENST00000488908 CYBAP13498 195 aa-0.66□□□□□ -2.52
CCDC93-209ENST00000488908 CAPZBP47756 277 aa-0.66□□□□□ -2.52
CCDC93-209ENST00000488908 LCN6P62502 163 aa-0.66□□□□□ -2.52
CCDC93-209ENST00000488908 RGS21Q2M5E4 152 aa-0.66□□□□□ -2.52
CCDC93-209ENST00000488908 NUP35Q8NFH5 326 aa-0.66□□□□□ -2.52
CCDC93-209ENST00000488908 C9orf16Q9BUW7 83 aa-0.66□□□□□ -2.52
CCDC93-209ENST00000488908 BPESC1Q9GZL8 116 aa-0.66□□□□□ -2.52
CCDC93-209ENST00000488908 COA4Q9NYJ1 87 aa-0.66□□□□□ -2.52
CCDC93-209ENST00000488908 CDK13Q14004 1512 aaKnown RBP-0.66□□□□□ -2.52
CCDC93-209ENST00000488908 ZFYVE9O95405 1425 aa-0.66□□□□□ -2.52
CCDC93-209ENST00000488908 BLMP54132 1417 aaPredicted RBP-0.66□□□□□ -2.52
CCDC93-209ENST00000488908 SPTA1P02549 2419 aa-0.66□□□□□ -2.52
CCDC93-209ENST00000488908 ANK3Q12955 4377 aaKnown RBP-0.66□□□□□ -2.52
CCDC93-209ENST00000488908 PLB1Q6P1J6 1458 aa-0.67□□□□□ -2.52
CCDC93-209ENST00000488908 EYSQ5T1H1 3165 aa-0.67□□□□□ -2.52
CCDC93-209ENST00000488908 KPNA4O00629 521 aaPredicted RBP-0.67□□□□□ -2.52
CCDC93-209ENST00000488908 SERPINA1P01009 418 aa-0.67□□□□□ -2.52
CCDC93-209ENST00000488908 SDC4P31431 198 aa-0.67□□□□□ -2.52
CCDC93-209ENST00000488908 SPAG11BQ08648 103 aa-0.67□□□□□ -2.52
CCDC93-209ENST00000488908 RHOHQ15669 191 aa-0.67□□□□□ -2.52
CCDC93-209ENST00000488908 DEFB109BQ30KR1 87 aa-0.67□□□□□ -2.52
CCDC93-209ENST00000488908 AKR1C8PQ5T2L2 129 aa-0.67□□□□□ -2.52
CCDC93-209ENST00000488908 LYPD5Q6UWN5 251 aa-0.67□□□□□ -2.52
CCDC93-209ENST00000488908 CROCCP2Q86T23 111 aa-0.67□□□□□ -2.52
CCDC93-209ENST00000488908 OR8J3Q8NGG0 315 aa-0.67□□□□□ -2.52
CCDC93-209ENST00000488908 PPP1R14BQ96C90 147 aa-0.67□□□□□ -2.52
CCDC93-209ENST00000488908 PRAP1Q96NZ9 151 aa-0.67□□□□□ -2.52
CCDC93-209ENST00000488908 PAIP2Q9BPZ3 127 aaKnown RBP-0.67□□□□□ -2.52
CCDC93-209ENST00000488908 RTL8AQ9BWD3 113 aa-0.67□□□□□ -2.52
CCDC93-209ENST00000488908 ATG5Q9H1Y0 275 aa-0.67□□□□□ -2.52
CCDC93-209ENST00000488908 COMMD3Q9UBI1 195 aa-0.67□□□□□ -2.52
CCDC93-209ENST00000488908 PRNDQ9UKY0 176 aa-0.67□□□□□ -2.52
CCDC93-209ENST00000488908 SSR3Q9UNL2 185 aa-0.67□□□□□ -2.52
CCDC93-209ENST00000488908 ARL2BPQ9Y2Y0 163 aa-0.67□□□□□ -2.52
CCDC93-209ENST00000488908 FRYQ5TBA9 3013 aa-0.67□□□□□ -2.52
CCDC93-209ENST00000488908 CD109Q6YHK3 1445 aa-0.67□□□□□ -2.52
CCDC93-209ENST00000488908 ZZEF1O43149 2961 aa-0.67□□□□□ -2.52
CCDC93-209ENST00000488908 SPG11Q96JI7 2443 aa-0.67□□□□□ -2.52
CCDC93-209ENST00000488908 DMXL1Q9Y485 3027 aa-0.67□□□□□ -2.52
CCDC93-209ENST00000488908 RREB1Q92766 1687 aa-0.68□□□□□ -2.52
CCDC93-209ENST00000488908 DMXL2Q8TDJ6 3036 aa-0.68□□□□□ -2.52
CCDC93-209ENST00000488908 A0A0C4DFX4 3053 aa-0.68□□□□□ -2.52
CCDC93-209ENST00000488908 IFITM5A6NNB3 132 aa-0.68□□□□□ -2.52
CCDC93-209ENST00000488908 C9JAW5 83 aa-0.68□□□□□ -2.52
CCDC93-209ENST00000488908 H3BQV1 296 aa-0.68□□□□□ -2.52
CCDC93-209ENST00000488908 H7BYZ3 331 aa-0.68□□□□□ -2.52
CCDC93-209ENST00000488908 NMBP08949 121 aa-0.68□□□□□ -2.52
CCDC93-209ENST00000488908 SAA1P0DJI8 122 aaPredicted RBP-0.68□□□□□ -2.52
CCDC93-209ENST00000488908 TPT1P13693 172 aaKnown RBP-0.68□□□□□ -2.52
CCDC93-209ENST00000488908 POU6F1Q14863 301 aa-0.68□□□□□ -2.52
CCDC93-209ENST00000488908 RTL8BQ17RB0 113 aa-0.68□□□□□ -2.52
CCDC93-209ENST00000488908 DIRC1Q969H9 104 aa-0.68□□□□□ -2.52
CCDC93-209ENST00000488908 PBDC1Q9BVG4 233 aa-0.68□□□□□ -2.52
CCDC93-209ENST00000488908 SH3BGRL3Q9H299 93 aa-0.68□□□□□ -2.52
CCDC93-209ENST00000488908 TNS1Q9HBL0 1735 aaKnown RBP-0.68□□□□□ -2.52
CCDC93-209ENST00000488908 ARMC1Q9NVT9 282 aa-0.68□□□□□ -2.52
CCDC93-209ENST00000488908 MPC1Q9Y5U8 109 aa-0.68□□□□□ -2.52
CCDC93-209ENST00000488908 CUBNO60494 3623 aa-0.68□□□□□ -2.52
CCDC93-209ENST00000488908 DLEC1Q9Y238 1755 aa-0.68□□□□□ -2.52
CCDC93-209ENST00000488908 PLECQ15149 4684 aaKnown RBP-0.68□□□□□ -2.52
CCDC93-209ENST00000488908 ACACAQ13085 2346 aa-0.69□□□□□ -2.52
CCDC93-209ENST00000488908 CHD7Q9P2D1 2997 aa-0.69□□□□□ -2.52
CCDC93-209ENST00000488908 CPDO75976 1380 aa-0.69□□□□□ -2.52
CCDC93-209ENST00000488908 BOD1L1Q8NFC6 3051 aa-0.69□□□□□ -2.52
CCDC93-209ENST00000488908 FGD6Q6ZV73 1430 aa-0.69□□□□□ -2.52
CCDC93-209ENST00000488908 TRAV12-2A0A075B6T6 113 aa-0.69□□□□□ -2.52
CCDC93-209ENST00000488908 TEX49A0A1B0GTD5 131 aa-0.69□□□□□ -2.52
CCDC93-209ENST00000488908 TMEM189A5PLL7 270 aa-0.69□□□□□ -2.52
CCDC93-209ENST00000488908 NIPSNAP2O75323 286 aa-0.69□□□□□ -2.52
CCDC93-209ENST00000488908 CCKP06307 115 aa-0.69□□□□□ -2.52
CCDC93-209ENST00000488908 BCL2P10415 239 aa-0.69□□□□□ -2.52
CCDC93-209ENST00000488908 PPP1R2P41236 205 aa-0.69□□□□□ -2.52
CCDC93-209ENST00000488908 CDKN2CP42773 168 aa-0.69□□□□□ -2.52
CCDC93-209ENST00000488908 GNG5P63218 68 aa-0.69□□□□□ -2.52
Retrieved 100 of 20,778 RNA–protein pairs in 99.4 ms