RNA–Protein interactions for RNA: ENST00000488727.5

CCM2-216, Transcript of CCM2 scaffold protein, humanhuman

TSL 5

Gene CCM2, Length 1,719 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-216ENST00000488727 AMTP48728 403 aa14.46□□□□□ -0.09
CCM2-216ENST00000488727 DEFA6Q01524 100 aa14.46□□□□□ -0.09
CCM2-216ENST00000488727 ZNF256Q9Y2P7 627 aaPredicted RBP14.46□□□□□ -0.09
CCM2-216ENST00000488727 DNAH3Q8TD57 4116 aa14.46□□□□□ -0.09
CCM2-216ENST00000488727 A0A1B0GW15 77 aa14.46□□□□□ -0.1
CCM2-216ENST00000488727 PRB2P02812 416 aaPredicted RBP14.46□□□□□ -0.1
CCM2-216ENST00000488727 FAM162BQ5T6X4 162 aa14.46□□□□□ -0.1
CCM2-216ENST00000488727 C8orf49Q96NF6 230 aa14.46□□□□□ -0.1
CCM2-216ENST00000488727 SLC50A1Q9BRV3 221 aa14.46□□□□□ -0.1
CCM2-216ENST00000488727 TRAV25A0A0B4J276 109 aa14.45□□□□□ -0.1
CCM2-216ENST00000488727 KIR2DL5BA0A0G2JN68 375 aa14.45□□□□□ -0.1
CCM2-216ENST00000488727 KIR2DL5BA0A0G2JPC4 375 aa14.45□□□□□ -0.1
CCM2-216ENST00000488727 TEX43Q6ZNM6 134 aa14.45□□□□□ -0.1
CCM2-216ENST00000488727 KIR2DL5AQ8N109 375 aa14.45□□□□□ -0.1
CCM2-216ENST00000488727 PRR25Q96S07 402 aa14.45□□□□□ -0.1
CCM2-216ENST00000488727 NRN1Q9NPD7 142 aa14.45□□□□□ -0.1
CCM2-216ENST00000488727 IGKV3-7A0A075B6H7 116 aa14.44□□□□□ -0.1
CCM2-216ENST00000488727 IGKV2-40A0A087WW87 121 aaPredicted RBP14.44□□□□□ -0.1
CCM2-216ENST00000488727 A0A1B0GUT8 65 aa14.44□□□□□ -0.1
CCM2-216ENST00000488727 IGKV2D-40P01614 121 aaPredicted RBP14.44□□□□□ -0.1
CCM2-216ENST00000488727 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa14.44□□□□□ -0.1
CCM2-216ENST00000488727 RIGQ13278 110 aa14.44□□□□□ -0.1
CCM2-216ENST00000488727 RBAKDNA6NC62 111 aa14.43□□□□□ -0.1
CCM2-216ENST00000488727 ZNF705FA8MVS1 300 aaPredicted RBP14.43□□□□□ -0.1
CCM2-216ENST00000488727 ZNF705DP0CH99 300 aaPredicted RBP14.43□□□□□ -0.1
CCM2-216ENST00000488727 ZNF705BP0CI00 300 aaPredicted RBP14.43□□□□□ -0.1
CCM2-216ENST00000488727 PMCHP20382 165 aa14.43□□□□□ -0.1
CCM2-216ENST00000488727 NIT1Q86X76 327 aa14.43□□□□□ -0.1
CCM2-216ENST00000488727 C14orf144Q96I85 54 aa14.43□□□□□ -0.1
CCM2-216ENST00000488727 ASCL2Q99929 193 aa14.43□□□□□ -0.1
CCM2-216ENST00000488727 SPAG8Q99932 426 aaPredicted RBP14.43□□□□□ -0.1
CCM2-216ENST00000488727 ZMAT5Q9UDW3 170 aaKnown RBP14.43□□□□□ -0.1
CCM2-216ENST00000488727 LOC102724200A0A096LPH7 203 aaPredicted RBP14.42□□□□□ -0.1
CCM2-216ENST00000488727 SH2D1AO60880 128 aa14.42□□□□□ -0.1
CCM2-216ENST00000488727 RPL11P62913 178 aaKnown RBP14.42□□□□□ -0.1
CCM2-216ENST00000488727 DMRTA1Q5VZB9 504 aa14.42□□□□□ -0.1
CCM2-216ENST00000488727 MRPL53Q96EL3 112 aaKnown RBP14.42□□□□□ -0.1
CCM2-216ENST00000488727 NDFIP1Q9BT67 221 aa14.42□□□□□ -0.1
CCM2-216ENST00000488727 MS4A6AQ9H2W1 248 aa14.41□□□□□ -0.1
CCM2-216ENST00000488727 HLA-DMBP28068 263 aa14.41□□□□□ -0.1
CCM2-216ENST00000488727 RPS20P60866 119 aaKnown RBP14.41□□□□□ -0.1
CCM2-216ENST00000488727 Q8N976 141 aa14.41□□□□□ -0.1
CCM2-216ENST00000488727 VGLL1Q99990 258 aa14.41□□□□□ -0.1
CCM2-216ENST00000488727 NDUFAF3Q9BU61 184 aa14.41□□□□□ -0.1
CCM2-216ENST00000488727 MEGF8Q7Z7M0 2845 aa14.4□□□□□ -0.1
CCM2-216ENST00000488727 TMEM189A5PLL7 270 aa14.4□□□□□ -0.1
CCM2-216ENST00000488727 HSBP1O75506 76 aa14.4□□□□□ -0.1
CCM2-216ENST00000488727 CD7P09564 240 aa14.4□□□□□ -0.1
CCM2-216ENST00000488727 ARMS2P0C7Q2 107 aa14.4□□□□□ -0.1
CCM2-216ENST00000488727 TFPI2P48307 235 aa14.4□□□□□ -0.1
CCM2-216ENST00000488727 DCANP1Q8TF63 244 aa14.39□□□□□ -0.11
CCM2-216ENST00000488727 BORCS7Q96B45 105 aa14.39□□□□□ -0.11
CCM2-216ENST00000488727 CHCHD1Q96BP2 118 aaKnown RBP14.39□□□□□ -0.11
CCM2-216ENST00000488727 URB1-AS1Q96HZ7 61 aa14.39□□□□□ -0.11
CCM2-216ENST00000488727 FBN3Q75N90 2809 aa14.38□□□□□ -0.11
CCM2-216ENST00000488727 PRB4P10163 310 aaPredicted RBP14.38□□□□□ -0.11
CCM2-216ENST00000488727 KRTDAPP60985 99 aa14.38□□□□□ -0.11
CCM2-216ENST00000488727 ZNF493Q6ZR52 646 aa14.38□□□□□ -0.11
CCM2-216ENST00000488727 WFDC3Q8IUB2 231 aa14.38□□□□□ -0.11
CCM2-216ENST00000488727 CLEC5AQ9NY25 188 aa14.38□□□□□ -0.11
CCM2-216ENST00000488727 IGFL4Q6B9Z1 124 aa14.38□□□□□ -0.11
CCM2-216ENST00000488727 Q8N1Y9 231 aa14.38□□□□□ -0.11
CCM2-216ENST00000488727 FAM19A2Q8N3H0 131 aa14.38□□□□□ -0.11
CCM2-216ENST00000488727 C20orf144Q9BQM9 153 aa14.38□□□□□ -0.11
CCM2-216ENST00000488727 TRAV8-2A0A0B4J237 113 aa14.37□□□□□ -0.11
CCM2-216ENST00000488727 OR4C46A6NHA9 309 aa14.37□□□□□ -0.11
CCM2-216ENST00000488727 K7EIL1 84 aa14.37□□□□□ -0.11
CCM2-216ENST00000488727 NTF3P20783 257 aa14.37□□□□□ -0.11
CCM2-216ENST00000488727 RNASEKQ6P5S7 137 aaKnown RBP14.37□□□□□ -0.11
CCM2-216ENST00000488727 GTSCR1Q86UQ5 136 aa14.37□□□□□ -0.11
CCM2-216ENST00000488727 Q8TAT8 98 aa14.37□□□□□ -0.11
CCM2-216ENST00000488727 K7EQG2 157 aa14.36□□□□□ -0.11
CCM2-216ENST00000488727 C3orf79P0CE67 100 aa14.36□□□□□ -0.11
CCM2-216ENST00000488727 RAB4AP20338 218 aa14.36□□□□□ -0.11
CCM2-216ENST00000488727 CTRLP40313 264 aa14.36□□□□□ -0.11
CCM2-216ENST00000488727 C19orf73Q9NVV2 129 aa14.36□□□□□ -0.11
CCM2-216ENST00000488727 TRAV2A0A0B4J234 112 aa14.35□□□□□ -0.11
CCM2-216ENST00000488727 PRAC2D3DTV9 90 aa14.35□□□□□ -0.11
CCM2-216ENST00000488727 M0R2Z0 102 aa14.35□□□□□ -0.11
CCM2-216ENST00000488727 ZNF80P51504 273 aaPredicted RBP14.35□□□□□ -0.11
CCM2-216ENST00000488727 ODF3L2Q3SX64 289 aa14.35□□□□□ -0.11
CCM2-216ENST00000488727 WFDC10AQ9H1F0 79 aa14.35□□□□□ -0.11
CCM2-216ENST00000488727 SOCS3O14543 225 aa14.34□□□□□ -0.11
CCM2-216ENST00000488727 IGLC6P0CF74 106 aa14.34□□□□□ -0.11
CCM2-216ENST00000488727 LYZL1Q6UWQ5 148 aa14.34□□□□□ -0.11
CCM2-216ENST00000488727 RNF182Q8N6D2 247 aa14.34□□□□□ -0.11
CCM2-216ENST00000488727 VAMP8Q9BV40 100 aa14.34□□□□□ -0.11
CCM2-216ENST00000488727 PPP1R14DQ9NXH3 145 aa14.34□□□□□ -0.11
CCM2-216ENST00000488727 FABP5P3A8MUU1 101 aa14.33□□□□□ -0.12
CCM2-216ENST00000488727 ERCC8Q13216 396 aa14.32□□□□□ -0.12
CCM2-216ENST00000488727 LINC01559Q495D7 138 aa14.32□□□□□ -0.12
CCM2-216ENST00000488727 LBHQ53QV2 105 aaPredicted RBP14.32□□□□□ -0.12
CCM2-216ENST00000488727 MAP6D1Q9H9H5 199 aa14.32□□□□□ -0.12
CCM2-216ENST00000488727 TMSB15BA0A087X1C1 80 aa14.32□□□□□ -0.12
CCM2-216ENST00000488727 C9orf47Q6ZRZ4 202 aa14.32□□□□□ -0.12
CCM2-216ENST00000488727 FER1L6-AS1Q8NA97 138 aa14.32□□□□□ -0.12
CCM2-216ENST00000488727 OR11H12B2RN74 326 aa14.31□□□□□ -0.12
CCM2-216ENST00000488727 ZNF688P0C7X2 276 aa14.31□□□□□ -0.12
CCM2-216ENST00000488727 LINC00614P0C842 121 aa14.31□□□□□ -0.12
CCM2-216ENST00000488727 TDRG1Q3Y452 100 aa14.31□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 219.3 ms