RNA–Protein interactions for RNA: ENST00000486975.1

CLDN11-207, Transcript of claudin 11, humanhuman

TSL 2 BASIC

Gene CLDN11, Length 1,139 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN11-207ENST00000486975 MDFICQ9P1T7 246 aa9.94□□□□□ -0.82
CLDN11-207ENST00000486975 TNFSF18Q9UNG2 199 aa9.94□□□□□ -0.82
CLDN11-207ENST00000486975 ICOSQ9Y6W8 199 aa9.94□□□□□ -0.82
CLDN11-207ENST00000486975 TRAV21A0A0B4J279 112 aa9.93□□□□□ -0.82
CLDN11-207ENST00000486975 HMGB3O15347 200 aaKnown RBP9.93□□□□□ -0.82
CLDN11-207ENST00000486975 CRYBA4P53673 196 aa9.93□□□□□ -0.82
CLDN11-207ENST00000486975 FHL2Q14192 279 aa9.93□□□□□ -0.82
CLDN11-207ENST00000486975 TMEM183BQ1AE95 376 aa9.93□□□□□ -0.82
CLDN11-207ENST00000486975 Q5BKY6 102 aa9.93□□□□□ -0.82
CLDN11-207ENST00000486975 IQCF2Q8IXL9 164 aa9.93□□□□□ -0.82
CLDN11-207ENST00000486975 TMEM183AQ8IXX5 376 aa9.93□□□□□ -0.82
CLDN11-207ENST00000486975 C5orf17Q8NAS9 161 aa9.93□□□□□ -0.82
CLDN11-207ENST00000486975 INO80EQ8NBZ0 244 aaPredicted RBP9.93□□□□□ -0.82
CLDN11-207ENST00000486975 TVP23CQ96ET8 276 aa9.93□□□□□ -0.82
CLDN11-207ENST00000486975 KRTAP1-5Q9BYS1 174 aa9.93□□□□□ -0.82
CLDN11-207ENST00000486975 RPH3ALQ9UNE2 315 aa9.93□□□□□ -0.82
CLDN11-207ENST00000486975 DYNC1H1Q14204 4646 aaKnown RBP9.93□□□□□ -0.82
CLDN11-207ENST00000486975 TRAV8-1A0A0A6YYK1 113 aa9.92□□□□□ -0.82
CLDN11-207ENST00000486975 RNF222A6NCQ9 220 aa9.92□□□□□ -0.82
CLDN11-207ENST00000486975 GCHFRP30047 84 aa9.92□□□□□ -0.82
CLDN11-207ENST00000486975 TREM1Q9NP99 234 aa9.92□□□□□ -0.82
CLDN11-207ENST00000486975 TMEM167BQ9NRX6 74 aa9.92□□□□□ -0.82
CLDN11-207ENST00000486975 HHLA3Q9XRX5 114 aa9.92□□□□□ -0.82
CLDN11-207ENST00000486975 CXorf1O96002 111 aa9.91□□□□□ -0.82
CLDN11-207ENST00000486975 IGHV3-53P01767 116 aa9.91□□□□□ -0.82
CLDN11-207ENST00000486975 TCRAP04437 139 aa9.91□□□□□ -0.82
CLDN11-207ENST00000486975 GNG5P63218 68 aa9.91□□□□□ -0.82
CLDN11-207ENST00000486975 MRPL23Q16540 153 aaKnown RBP9.91□□□□□ -0.82
CLDN11-207ENST00000486975 RGS21Q2M5E4 152 aa9.91□□□□□ -0.82
CLDN11-207ENST00000486975 KCNS1Q96KK3 526 aa9.91□□□□□ -0.82
CLDN11-207ENST00000486975 NDFIP1Q9BT67 221 aa9.91□□□□□ -0.82
CLDN11-207ENST00000486975 ACTR3CQ9C0K3 210 aaPredicted RBP9.91□□□□□ -0.82
CLDN11-207ENST00000486975 SH3BGRL3Q9H299 93 aa9.91□□□□□ -0.82
CLDN11-207ENST00000486975 BORCS7-ASMTA0A0B4J1R7 106 aa9.9□□□□□ -0.82
CLDN11-207ENST00000486975 IGHV3-16A0A0C4DH30 117 aa9.9□□□□□ -0.82
CLDN11-207ENST00000486975 FBLL1A6NHQ2 334 aaKnown RBP9.9□□□□□ -0.82
CLDN11-207ENST00000486975 K7EQM0 130 aa9.9□□□□□ -0.82
CLDN11-207ENST00000486975 RPL7L1Q6DKI1 246 aaKnown RBP9.9□□□□□ -0.82
CLDN11-207ENST00000486975 OR2T35Q8NGX2 323 aa9.9□□□□□ -0.82
CLDN11-207ENST00000486975 C8orf49Q96NF6 230 aa9.9□□□□□ -0.82
CLDN11-207ENST00000486975 SDF2L1Q9HCN8 221 aa9.9□□□□□ -0.82
CLDN11-207ENST00000486975 NAGKQ9UJ70 344 aa9.9□□□□□ -0.82
CLDN11-207ENST00000486975 FXYD6-FXYD2A0A087WZ82 144 aa9.89□□□□□ -0.83
CLDN11-207ENST00000486975 TRGV4A0A0C4DH28 118 aa9.89□□□□□ -0.83
CLDN11-207ENST00000486975 GGTLC3B5MD39 225 aa9.89□□□□□ -0.83
CLDN11-207ENST00000486975 F6UZH7 168 aa9.89□□□□□ -0.83
CLDN11-207ENST00000486975 M0R2P5 195 aa9.89□□□□□ -0.83
CLDN11-207ENST00000486975 ZNF575Q86XF7 245 aa9.89□□□□□ -0.83
CLDN11-207ENST00000486975 ZNF479Q96JC4 524 aa9.89□□□□□ -0.83
CLDN11-207ENST00000486975 KRTAP17-1Q9BYP8 105 aa9.89□□□□□ -0.83
CLDN11-207ENST00000486975 EPDR1Q9UM22 224 aa9.89□□□□□ -0.83
CLDN11-207ENST00000486975 TRAV4A0A0B4J268 109 aa9.88□□□□□ -0.83
CLDN11-207ENST00000486975 A0A1W2PRE2 83 aa9.88□□□□□ -0.83
CLDN11-207ENST00000486975 G3V3Q6 166 aa9.88□□□□□ -0.83
CLDN11-207ENST00000486975 SIVA1O15304 175 aa9.88□□□□□ -0.83
CLDN11-207ENST00000486975 GNRH2O43555 120 aa9.88□□□□□ -0.83
CLDN11-207ENST00000486975 IGLV2-11P01706 119 aa9.88□□□□□ -0.83
CLDN11-207ENST00000486975 ORM1P02763 201 aa9.88□□□□□ -0.83
CLDN11-207ENST00000486975 TYMSP04818 313 aa9.88□□□□□ -0.83
CLDN11-207ENST00000486975 SUMO1P63165 101 aaKnown RBP9.88□□□□□ -0.83
CLDN11-207ENST00000486975 NEGR1Q7Z3B1 354 aa9.88□□□□□ -0.83
CLDN11-207ENST00000486975 CYB561D1Q8N8Q1 229 aa9.88□□□□□ -0.83
CLDN11-207ENST00000486975 TMEM75Q8N9X5 138 aa9.88□□□□□ -0.83
CLDN11-207ENST00000486975 CTXND1A0A1B0GTU2 59 aa9.87□□□□□ -0.83
CLDN11-207ENST00000486975 NXPH4O95158 308 aa9.87□□□□□ -0.83
CLDN11-207ENST00000486975 SFTA3P0C7M3 94 aa9.87□□□□□ -0.83
CLDN11-207ENST00000486975 FLI1Q01543 452 aaPredicted RBP9.87□□□□□ -0.83
CLDN11-207ENST00000486975 LYPD5Q6UWN5 251 aa9.87□□□□□ -0.83
CLDN11-207ENST00000486975 PSG8Q9UQ74 426 aa9.87□□□□□ -0.83
CLDN11-207ENST00000486975 K7EQD1 137 aa9.86□□□□□ -0.83
CLDN11-207ENST00000486975 TAAR5O14804 337 aa9.86□□□□□ -0.83
CLDN11-207ENST00000486975 PFN1P07737 140 aaKnown RBP9.86□□□□□ -0.83
CLDN11-207ENST00000486975 ZNF726P1Q15940 193 aa9.86□□□□□ -0.83
CLDN11-207ENST00000486975 SAPCD1Q5SSQ6 148 aa9.86□□□□□ -0.83
CLDN11-207ENST00000486975 OR4C5Q8NGB2 326 aa9.86□□□□□ -0.83
CLDN11-207ENST00000486975 SGK494Q96LW2 274 aa9.86□□□□□ -0.83
CLDN11-207ENST00000486975 C9JCJ5 164 aa9.85□□□□□ -0.83
CLDN11-207ENST00000486975 K7EP13 123 aa9.85□□□□□ -0.83
CLDN11-207ENST00000486975 CIDEAO60543 219 aa9.85□□□□□ -0.83
CLDN11-207ENST00000486975 GCGP01275 180 aa9.85□□□□□ -0.83
CLDN11-207ENST00000486975 SRIP30626 198 aa9.85□□□□□ -0.83
CLDN11-207ENST00000486975 ZNF80P51504 273 aaPredicted RBP9.85□□□□□ -0.83
CLDN11-207ENST00000486975 ZFP69Q49AA0 526 aa9.85□□□□□ -0.83
CLDN11-207ENST00000486975 SMUG1Q53HV7 270 aa9.85□□□□□ -0.83
CLDN11-207ENST00000486975 PCNPQ8WW12 178 aaKnown RBP9.85□□□□□ -0.83
CLDN11-207ENST00000486975 PTH2Q96A98 100 aa9.85□□□□□ -0.83
CLDN11-207ENST00000486975 C11orf21Q9P2W6 132 aa9.85□□□□□ -0.83
CLDN11-207ENST00000486975 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP9.85□□□□□ -0.83
CLDN11-207ENST00000486975 C16orf90A8MZG2 172 aa9.84□□□□□ -0.83
CLDN11-207ENST00000486975 GYPEP15421 78 aa9.84□□□□□ -0.83
CLDN11-207ENST00000486975 LINC00315P59091 139 aa9.84□□□□□ -0.83
CLDN11-207ENST00000486975 SH2D6Q7Z4S9 175 aa9.84□□□□□ -0.83
CLDN11-207ENST00000486975 TXNDC17Q9BRA2 123 aa9.84□□□□□ -0.83
CLDN11-207ENST00000486975 NKX6-2Q9C056 277 aaPredicted RBP9.84□□□□□ -0.83
CLDN11-207ENST00000486975 ARPC5O15511 151 aa9.83□□□□□ -0.84
CLDN11-207ENST00000486975 CDK2AP2O75956 126 aa9.83□□□□□ -0.84
CLDN11-207ENST00000486975 GATA1P15976 413 aaPredicted RBP9.83□□□□□ -0.84
CLDN11-207ENST00000486975 PPT1P50897 306 aa9.83□□□□□ -0.84
CLDN11-207ENST00000486975 ZNF876PQ49A33 203 aa9.83□□□□□ -0.84
CLDN11-207ENST00000486975 AKR1C8PQ5T2L2 129 aa9.83□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 44.6 ms