RNA–Protein interactions for RNA: ENST00000485513.1

HLA-F-227, Transcript of major histocompatibility complex, class I, F, humanhuman

Gene HLA-F, Length 778 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-F-227ENST00000485513 TREM1Q9NP99 234 aa17.49■□□□□ 0.39
HLA-F-227ENST00000485513 ERVFC1-1P60608 527 aa17.48■□□□□ 0.39
HLA-F-227ENST00000485513 GNG5P63218 68 aa17.48■□□□□ 0.39
HLA-F-227ENST00000485513 OR4C5Q8NGB2 326 aa17.48■□□□□ 0.39
HLA-F-227ENST00000485513 C9JCJ5 164 aa17.47■□□□□ 0.39
HLA-F-227ENST00000485513 WFDC10BQ8IUB3 73 aa17.47■□□□□ 0.39
HLA-F-227ENST00000485513 TXNDC17Q9BRA2 123 aa17.47■□□□□ 0.39
HLA-F-227ENST00000485513 SDF2L1Q9HCN8 221 aa17.47■□□□□ 0.39
HLA-F-227ENST00000485513 SCRT2Q9NQ03 307 aa17.47■□□□□ 0.39
HLA-F-227ENST00000485513 PGPEP1Q9NXJ5 209 aa17.47■□□□□ 0.39
HLA-F-227ENST00000485513 TYMSP04818 313 aa17.46■□□□□ 0.39
HLA-F-227ENST00000485513 ARL14EPLP0DKL9 152 aa17.46■□□□□ 0.39
HLA-F-227ENST00000485513 K7EP13 123 aa17.45■□□□□ 0.38
HLA-F-227ENST00000485513 CDC34P49427 236 aaPredicted RBP17.45■□□□□ 0.38
HLA-F-227ENST00000485513 KCNS1Q96KK3 526 aa17.45■□□□□ 0.38
HLA-F-227ENST00000485513 ALG5Q9Y673 324 aa17.45■□□□□ 0.38
HLA-F-227ENST00000485513 EVI2AP22794 236 aa17.44■□□□□ 0.38
HLA-F-227ENST00000485513 HSD17B11Q8NBQ5 300 aa17.44■□□□□ 0.38
HLA-F-227ENST00000485513 ASB13Q8WXK3 278 aa17.44■□□□□ 0.38
HLA-F-227ENST00000485513 SGK494Q96LW2 274 aa17.44■□□□□ 0.38
HLA-F-227ENST00000485513 NDFIP1Q9BT67 221 aa17.44■□□□□ 0.38
HLA-F-227ENST00000485513 SERTM2A0A1B0GWG4 89 aa17.43■□□□□ 0.38
HLA-F-227ENST00000485513 STAG3L2P0CL84 134 aa17.43■□□□□ 0.38
HLA-F-227ENST00000485513 STAG3L3P0CL85 134 aa17.43■□□□□ 0.38
HLA-F-227ENST00000485513 OR2G3Q8NGZ4 309 aa17.43■□□□□ 0.38
HLA-F-227ENST00000485513 MSRB1Q9NZV6 116 aa17.43■□□□□ 0.38
HLA-F-227ENST00000485513 LOC100131303A0A0U1RQF7 123 aa17.42■□□□□ 0.38
HLA-F-227ENST00000485513 DNAH10OSP0CZ25 163 aa17.42■□□□□ 0.38
HLA-F-227ENST00000485513 FUSP35637 526 aaKnown RBP eCLIP17.42■□□□□ 0.38
HLA-F-227ENST00000485513 CDPF1Q6NVV7 123 aa17.42■□□□□ 0.38
HLA-F-227ENST00000485513 SH2D6Q7Z4S9 175 aa17.42■□□□□ 0.38
HLA-F-227ENST00000485513 C5orf17Q8NAS9 161 aa17.42■□□□□ 0.38
HLA-F-227ENST00000485513 RAB24Q969Q5 203 aa17.41■□□□□ 0.38
HLA-F-227ENST00000485513 PSMG3Q9BT73 122 aaPredicted RBP17.41■□□□□ 0.38
HLA-F-227ENST00000485513 A0A087WTM6 91 aa17.4■□□□□ 0.38
HLA-F-227ENST00000485513 TCRAP04437 139 aa17.4■□□□□ 0.38
HLA-F-227ENST00000485513 GATA1P15976 413 aaPredicted RBP17.4■□□□□ 0.38
HLA-F-227ENST00000485513 GCHFRP30047 84 aa17.4■□□□□ 0.38
HLA-F-227ENST00000485513 NHLRC2Q8NBF2 726 aa17.4■□□□□ 0.38
HLA-F-227ENST00000485513 AQP10Q96PS8 301 aa17.4■□□□□ 0.38
HLA-F-227ENST00000485513 K7EQM0 130 aa17.39■□□□□ 0.37
HLA-F-227ENST00000485513 ATP6V0CP27449 155 aa17.39■□□□□ 0.37
HLA-F-227ENST00000485513 SUN5Q8TC36 379 aa17.39■□□□□ 0.37
HLA-F-227ENST00000485513 FBLL1A6NHQ2 334 aaKnown RBP17.38■□□□□ 0.37
HLA-F-227ENST00000485513 MBP02144 154 aa17.38■□□□□ 0.37
HLA-F-227ENST00000485513 CRYGDP07320 174 aa17.38■□□□□ 0.37
HLA-F-227ENST00000485513 ZNF80P51504 273 aaPredicted RBP17.38■□□□□ 0.37
HLA-F-227ENST00000485513 ZNF876PQ49A33 203 aa17.38■□□□□ 0.37
HLA-F-227ENST00000485513 C10orf126Q8N4M7 172 aa17.38■□□□□ 0.37
HLA-F-227ENST00000485513 PSG8Q9UQ74 426 aa17.38■□□□□ 0.37
HLA-F-227ENST00000485513 TAAR5O14804 337 aa17.37■□□□□ 0.37
HLA-F-227ENST00000485513 TIRAPP58753 221 aa17.37■□□□□ 0.37
HLA-F-227ENST00000485513 SERF2P84101 59 aa17.37■□□□□ 0.37
HLA-F-227ENST00000485513 MED28Q9H204 178 aa17.37■□□□□ 0.37
HLA-F-227ENST00000485513 C11orf21Q9P2W6 132 aa17.37■□□□□ 0.37
HLA-F-227ENST00000485513 GCGP01275 180 aa17.36■□□□□ 0.37
HLA-F-227ENST00000485513 PPT1P50897 306 aa17.36■□□□□ 0.37
HLA-F-227ENST00000485513 SUMO1P63165 101 aaKnown RBP17.36■□□□□ 0.37
HLA-F-227ENST00000485513 CXorf1O96002 111 aa17.35■□□□□ 0.37
HLA-F-227ENST00000485513 SH3BGRL3Q9H299 93 aa17.35■□□□□ 0.37
HLA-F-227ENST00000485513 TMEM167BQ9NRX6 74 aa17.35■□□□□ 0.37
HLA-F-227ENST00000485513 EPDR1Q9UM22 224 aa17.35■□□□□ 0.37
HLA-F-227ENST00000485513 GGTLC3B5MD39 225 aa17.34■□□□□ 0.37
HLA-F-227ENST00000485513 RS1O15537 224 aa17.34■□□□□ 0.37
HLA-F-227ENST00000485513 CIDEAO60543 219 aa17.34■□□□□ 0.37
HLA-F-227ENST00000485513 PTTG1O95997 202 aa17.34■□□□□ 0.37
HLA-F-227ENST00000485513 IGLV2-11P01706 119 aa17.34■□□□□ 0.37
HLA-F-227ENST00000485513 PFN1P07737 140 aaKnown RBP17.34■□□□□ 0.37
HLA-F-227ENST00000485513 FLI1Q01543 452 aaPredicted RBP17.34■□□□□ 0.37
HLA-F-227ENST00000485513 ZFP69Q49AA0 526 aa17.34■□□□□ 0.37
HLA-F-227ENST00000485513 SMUG1Q53HV7 270 aa17.34■□□□□ 0.37
HLA-F-227ENST00000485513 CFAP126Q5VTH2 177 aa17.34■□□□□ 0.37
HLA-F-227ENST00000485513 SLC25A29Q8N8R3 303 aa17.34■□□□□ 0.37
HLA-F-227ENST00000485513 PRADC1Q9BSG0 188 aa17.34■□□□□ 0.37
HLA-F-227ENST00000485513 ACTR3CQ9C0K3 210 aaPredicted RBP17.34■□□□□ 0.37
HLA-F-227ENST00000485513 IGHV3-38A0A0C4DH36 116 aa17.33■□□□□ 0.36
HLA-F-227ENST00000485513 DPPA3Q6W0C5 159 aa17.33■□□□□ 0.36
HLA-F-227ENST00000485513 PRNTQ86SH4 94 aa17.33■□□□□ 0.36
HLA-F-227ENST00000485513 CYB561D1Q8N8Q1 229 aa17.33■□□□□ 0.36
HLA-F-227ENST00000485513 TMEM75Q8N9X5 138 aa17.33■□□□□ 0.36
HLA-F-227ENST00000485513 C9orf85Q96MD7 179 aa17.33■□□□□ 0.36
HLA-F-227ENST00000485513 BATF3Q9NR55 127 aa17.33■□□□□ 0.36
HLA-F-227ENST00000485513 TNFSF18Q9UNG2 199 aa17.33■□□□□ 0.36
HLA-F-227ENST00000485513 RHOHQ15669 191 aa17.32■□□□□ 0.36
HLA-F-227ENST00000485513 IGHV3-73A0A0B4J1V6 119 aa17.31■□□□□ 0.36
HLA-F-227ENST00000485513 TRBV6-4A0A1B0GX49 114 aa17.31■□□□□ 0.36
HLA-F-227ENST00000485513 Q5BKY6 102 aa17.31■□□□□ 0.36
HLA-F-227ENST00000485513 TRAV8-6A0A0B4J262 113 aa17.3■□□□□ 0.36
HLA-F-227ENST00000485513 EPM2AB3EWF7 344 aa17.3■□□□□ 0.36
HLA-F-227ENST00000485513 LINC01556Q5JQF7 62 aa17.3■□□□□ 0.36
HLA-F-227ENST00000485513 ZNF506Q5JVG8 444 aa17.3■□□□□ 0.36
HLA-F-227ENST00000485513 SAPCD1Q5SSQ6 148 aa17.3■□□□□ 0.36
HLA-F-227ENST00000485513 PTH2Q96A98 100 aa17.3■□□□□ 0.36
HLA-F-227ENST00000485513 PGPEP1LA6NFU8 196 aa17.29■□□□□ 0.36
HLA-F-227ENST00000485513 GIPP09681 153 aaPredicted RBP17.29■□□□□ 0.36
HLA-F-227ENST00000485513 XGP55808 180 aa17.29■□□□□ 0.36
HLA-F-227ENST00000485513 KRTAP10-1P60331 282 aa17.29■□□□□ 0.36
HLA-F-227ENST00000485513 OR10J3Q5JRS4 329 aa17.29■□□□□ 0.36
HLA-F-227ENST00000485513 INO80EQ8NBZ0 244 aaPredicted RBP17.29■□□□□ 0.36
HLA-F-227ENST00000485513 BOLA1Q9Y3E2 137 aa17.29■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 136.4 ms