RNA–Protein interactions for RNA: ENST00000484841.5

ACTB-212, Transcript of actin beta, humanhuman

TSL 5

Gene ACTB, Length 1,032 nt, Biotype retained intron, Subcellular localisation Cell leading edge, Cytoplasm, Cytosol, Exosome, Lamellipodium, Mitochondria, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTB-212ENST00000484841 HMGB3O15347 200 aaKnown RBP13.75□□□□□ -0.21
ACTB-212ENST00000484841 GNRH2O43555 120 aa13.75□□□□□ -0.21
ACTB-212ENST00000484841 Q6ZRN7 208 aaPredicted RBP13.75□□□□□ -0.21
ACTB-212ENST00000484841 SH2D6Q7Z4S9 175 aa13.75□□□□□ -0.21
ACTB-212ENST00000484841 RYR1P21817 5038 aa13.74□□□□□ -0.21
ACTB-212ENST00000484841 SERTM2A0A1B0GWG4 89 aa13.74□□□□□ -0.21
ACTB-212ENST00000484841 CDC34P49427 236 aaPredicted RBP13.74□□□□□ -0.21
ACTB-212ENST00000484841 MSRB1Q9NZV6 116 aa13.74□□□□□ -0.21
ACTB-212ENST00000484841 IGHV3-16A0A0C4DH30 117 aa13.73□□□□□ -0.21
ACTB-212ENST00000484841 TYMSP04818 313 aa13.73□□□□□ -0.21
ACTB-212ENST00000484841 GNG5P63218 68 aa13.73□□□□□ -0.21
ACTB-212ENST00000484841 CDPF1Q6NVV7 123 aa13.73□□□□□ -0.21
ACTB-212ENST00000484841 NHLRC2Q8NBF2 726 aa13.73□□□□□ -0.21
ACTB-212ENST00000484841 ASB13Q8WXK3 278 aa13.73□□□□□ -0.21
ACTB-212ENST00000484841 TNFRSF18Q9Y5U5 241 aa13.73□□□□□ -0.21
ACTB-212ENST00000484841 TRAV8-1A0A0A6YYK1 113 aa13.72□□□□□ -0.21
ACTB-212ENST00000484841 ARL14EPLP0DKL9 152 aa13.72□□□□□ -0.21
ACTB-212ENST00000484841 PPT1P50897 306 aa13.72□□□□□ -0.21
ACTB-212ENST00000484841 ZFP69Q49AA0 526 aa13.72□□□□□ -0.21
ACTB-212ENST00000484841 WFDC10BQ8IUB3 73 aa13.72□□□□□ -0.21
ACTB-212ENST00000484841 C10orf126Q8N4M7 172 aa13.72□□□□□ -0.21
ACTB-212ENST00000484841 MBP02144 154 aa13.71□□□□□ -0.21
ACTB-212ENST00000484841 HSD17B11Q8NBQ5 300 aa13.71□□□□□ -0.21
ACTB-212ENST00000484841 SGK494Q96LW2 274 aa13.71□□□□□ -0.21
ACTB-212ENST00000484841 FBLL1A6NHQ2 334 aaKnown RBP13.7□□□□□ -0.22
ACTB-212ENST00000484841 TAAR5O14804 337 aa13.7□□□□□ -0.22
ACTB-212ENST00000484841 C5orf17Q8NAS9 161 aa13.7□□□□□ -0.22
ACTB-212ENST00000484841 ALG5Q9Y673 324 aa13.7□□□□□ -0.22
ACTB-212ENST00000484841 CRYGDP07320 174 aa13.69□□□□□ -0.22
ACTB-212ENST00000484841 STAG3L2P0CL84 134 aa13.69□□□□□ -0.22
ACTB-212ENST00000484841 STAG3L3P0CL85 134 aa13.69□□□□□ -0.22
ACTB-212ENST00000484841 DNAH10OSP0CZ25 163 aa13.69□□□□□ -0.22
ACTB-212ENST00000484841 OR2G3Q8NGZ4 309 aa13.69□□□□□ -0.22
ACTB-212ENST00000484841 RAB24Q969Q5 203 aa13.69□□□□□ -0.22
ACTB-212ENST00000484841 TVP23CQ96ET8 276 aa13.69□□□□□ -0.22
ACTB-212ENST00000484841 PRADC1Q9BSG0 188 aa13.69□□□□□ -0.22
ACTB-212ENST00000484841 PSMG3Q9BT73 122 aaPredicted RBP13.69□□□□□ -0.22
ACTB-212ENST00000484841 MED28Q9H204 178 aa13.69□□□□□ -0.22
ACTB-212ENST00000484841 BOLA1Q9Y3E2 137 aa13.69□□□□□ -0.22
ACTB-212ENST00000484841 CIDEAO60543 219 aa13.68□□□□□ -0.22
ACTB-212ENST00000484841 TCRAP04437 139 aa13.68□□□□□ -0.22
ACTB-212ENST00000484841 GCHFRP30047 84 aa13.68□□□□□ -0.22
ACTB-212ENST00000484841 SERF2P84101 59 aa13.68□□□□□ -0.22
ACTB-212ENST00000484841 ZNF876PQ49A33 203 aa13.68□□□□□ -0.22
ACTB-212ENST00000484841 TMEM167BQ9NRX6 74 aa13.68□□□□□ -0.22
ACTB-212ENST00000484841 A0A087WTM6 91 aa13.67□□□□□ -0.22
ACTB-212ENST00000484841 TRAV8-6A0A0B4J262 113 aa13.67□□□□□ -0.22
ACTB-212ENST00000484841 LOC100131303A0A0U1RQF7 123 aa13.67□□□□□ -0.22
ACTB-212ENST00000484841 PSCAO43653 123 aa13.67□□□□□ -0.22
ACTB-212ENST00000484841 CXorf1O96002 111 aa13.67□□□□□ -0.22
ACTB-212ENST00000484841 GCGP01275 180 aa13.67□□□□□ -0.22
ACTB-212ENST00000484841 PFN1P07737 140 aaKnown RBP13.67□□□□□ -0.22
ACTB-212ENST00000484841 ACTR3CQ9C0K3 210 aaPredicted RBP13.67□□□□□ -0.22
ACTB-212ENST00000484841 PSG8Q9UQ74 426 aa13.67□□□□□ -0.22
ACTB-212ENST00000484841 ATP6V0CP27449 155 aa13.66□□□□□ -0.22
ACTB-212ENST00000484841 FUSP35637 526 aaKnown RBP eCLIP13.66□□□□□ -0.226e-7■■■□□ 15.9
ACTB-212ENST00000484841 SUMO1P63165 101 aaKnown RBP13.66□□□□□ -0.22
ACTB-212ENST00000484841 SMUG1Q53HV7 270 aa13.66□□□□□ -0.22
ACTB-212ENST00000484841 PRNTQ86SH4 94 aa13.66□□□□□ -0.22
ACTB-212ENST00000484841 AQP10Q96PS8 301 aa13.66□□□□□ -0.22
ACTB-212ENST00000484841 IGHV3-38A0A0C4DH36 116 aa13.65□□□□□ -0.22
ACTB-212ENST00000484841 EPM2AB3EWF7 344 aa13.65□□□□□ -0.22
ACTB-212ENST00000484841 GATA1P15976 413 aaPredicted RBP13.65□□□□□ -0.22
ACTB-212ENST00000484841 FLI1Q01543 452 aaPredicted RBP13.65□□□□□ -0.22
ACTB-212ENST00000484841 RHOHQ15669 191 aa13.65□□□□□ -0.22
ACTB-212ENST00000484841 OR10J3Q5JRS4 329 aa13.65□□□□□ -0.22
ACTB-212ENST00000484841 SAPCD1Q5SSQ6 148 aa13.65□□□□□ -0.22
ACTB-212ENST00000484841 TIRAPP58753 221 aa13.64□□□□□ -0.23
ACTB-212ENST00000484841 CYB561D1Q8N8Q1 229 aa13.64□□□□□ -0.23
ACTB-212ENST00000484841 SLC25A29Q8N8R3 303 aa13.64□□□□□ -0.23
ACTB-212ENST00000484841 INO80EQ8NBZ0 244 aaPredicted RBP13.64□□□□□ -0.23
ACTB-212ENST00000484841 BATF3Q9NR55 127 aa13.64□□□□□ -0.23
ACTB-212ENST00000484841 EPDR1Q9UM22 224 aa13.64□□□□□ -0.23
ACTB-212ENST00000484841 TNFSF18Q9UNG2 199 aa13.64□□□□□ -0.23
ACTB-212ENST00000484841 ABCA13Q86UQ4 5058 aa13.63□□□□□ -0.23
ACTB-212ENST00000484841 TRBV6-4A0A1B0GX49 114 aa13.63□□□□□ -0.23
ACTB-212ENST00000484841 RS1O15537 224 aa13.63□□□□□ -0.23
ACTB-212ENST00000484841 PTTG1O95997 202 aa13.63□□□□□ -0.23
ACTB-212ENST00000484841 BORCS7-ASMTA0A0B4J1R7 106 aa13.62□□□□□ -0.23
ACTB-212ENST00000484841 IGHV3-73A0A0B4J1V6 119 aa13.62□□□□□ -0.23
ACTB-212ENST00000484841 ZNF80P51504 273 aaPredicted RBP13.62□□□□□ -0.23
ACTB-212ENST00000484841 CFAP126Q5VTH2 177 aa13.62□□□□□ -0.23
ACTB-212ENST00000484841 TMEM75Q8N9X5 138 aa13.62□□□□□ -0.23
ACTB-212ENST00000484841 SUN5Q8TC36 379 aa13.62□□□□□ -0.23
ACTB-212ENST00000484841 HSPG2P98160 4391 aa13.62□□□□□ -0.23
ACTB-212ENST00000484841 IFNA7P01567 189 aa13.61□□□□□ -0.23
ACTB-212ENST00000484841 MGST1P10620 155 aaKnown RBP13.61□□□□□ -0.23
ACTB-212ENST00000484841 S100A4P26447 101 aaKnown RBP13.61□□□□□ -0.23
ACTB-212ENST00000484841 SH3BGRL3Q9H299 93 aa13.61□□□□□ -0.23
ACTB-212ENST00000484841 LINC01556Q5JQF7 62 aa13.6□□□□□ -0.23
ACTB-212ENST00000484841 C9orf85Q96MD7 179 aa13.6□□□□□ -0.23
ACTB-212ENST00000484841 A0A1W2PRE2 83 aa13.59□□□□□ -0.23
ACTB-212ENST00000484841 PGPEP1LA6NFU8 196 aa13.59□□□□□ -0.23
ACTB-212ENST00000484841 GGTLC3B5MD39 225 aa13.59□□□□□ -0.23
ACTB-212ENST00000484841 GCSHP23434 173 aa13.59□□□□□ -0.23
ACTB-212ENST00000484841 ZNF506Q5JVG8 444 aa13.59□□□□□ -0.23
ACTB-212ENST00000484841 ATP6V0E2Q8NHE4 81 aa13.59□□□□□ -0.23
ACTB-212ENST00000484841 FRZBQ92765 325 aa13.59□□□□□ -0.23
ACTB-212ENST00000484841 PTH2Q96A98 100 aa13.59□□□□□ -0.23
ACTB-212ENST00000484841 C11orf21Q9P2W6 132 aa13.59□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 65.9 ms