RNA–Protein interactions for RNA: ENST00000484305.1

HDAC1-209, Transcript of histone deacetylase 1, humanhuman

TSL 5

Gene HDAC1, Length 561 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC1-209ENST00000484305 KCNRGQ8N5I3 272 aa8.93□□□□□ -0.98
HDAC1-209ENST00000484305 CYB561D1Q8N8Q1 229 aa8.93□□□□□ -0.98
HDAC1-209ENST00000484305 RASL10AQ92737 203 aa8.93□□□□□ -0.98
HDAC1-209ENST00000484305 NDFIP1Q9BT67 221 aa8.93□□□□□ -0.98
HDAC1-209ENST00000484305 FAT2Q9NYQ8 4349 aa8.93□□□□□ -0.98
HDAC1-209ENST00000484305 A0A096LPF7 62 aa8.92□□□□□ -0.98
HDAC1-209ENST00000484305 PAX4O43316 350 aa8.92□□□□□ -0.98
HDAC1-209ENST00000484305 TYMSP04818 313 aa8.92□□□□□ -0.98
HDAC1-209ENST00000484305 SFTA3P0C7M3 94 aa8.92□□□□□ -0.98
HDAC1-209ENST00000484305 ZNF345Q14585 488 aa8.92□□□□□ -0.98
HDAC1-209ENST00000484305 C1orf134Q5TEV5 83 aa8.92□□□□□ -0.98
HDAC1-209ENST00000484305 TMEM75Q8N9X5 138 aa8.92□□□□□ -0.98
HDAC1-209ENST00000484305 LINC00479Q96M42 142 aa8.92□□□□□ -0.98
HDAC1-209ENST00000484305 Q9H8V8 135 aa8.92□□□□□ -0.98
HDAC1-209ENST00000484305 SDF2L1Q9HCN8 221 aa8.92□□□□□ -0.98
HDAC1-209ENST00000484305 C11orf21Q9P2W6 132 aa8.92□□□□□ -0.98
HDAC1-209ENST00000484305 HHLA3Q9XRX5 114 aa8.92□□□□□ -0.98
HDAC1-209ENST00000484305 TRAV34A0A0B4J273 112 aa8.91□□□□□ -0.98
HDAC1-209ENST00000484305 MAP1LC3B2A6NCE7 125 aa8.91□□□□□ -0.98
HDAC1-209ENST00000484305 FAM74A7A6NL05 159 aa8.91□□□□□ -0.98
HDAC1-209ENST00000484305 HMSDA8MTL9 139 aa8.91□□□□□ -0.98
HDAC1-209ENST00000484305 GCGP01275 180 aa8.91□□□□□ -0.98
HDAC1-209ENST00000484305 IFNA7P01567 189 aa8.91□□□□□ -0.98
HDAC1-209ENST00000484305 FHITP49789 147 aa8.91□□□□□ -0.98
HDAC1-209ENST00000484305 CRYBA4P53673 196 aa8.91□□□□□ -0.98
HDAC1-209ENST00000484305 ZNF479Q96JC4 524 aa8.91□□□□□ -0.98
HDAC1-209ENST00000484305 KCNS1Q96KK3 526 aa8.91□□□□□ -0.98
HDAC1-209ENST00000484305 MAP1LC3BQ9GZQ8 125 aa8.91□□□□□ -0.98
HDAC1-209ENST00000484305 PRO0255Q9UI72 69 aa8.91□□□□□ -0.98
HDAC1-209ENST00000484305 M0R2P5 195 aa8.9□□□□□ -0.98
HDAC1-209ENST00000484305 PFN1P07737 140 aaKnown RBP8.9□□□□□ -0.98
HDAC1-209ENST00000484305 SOHLH1Q5JUK2 328 aa8.9□□□□□ -0.98
HDAC1-209ENST00000484305 UPK3BQ9BT76 320 aa8.9□□□□□ -0.98
HDAC1-209ENST00000484305 MRPS16Q9Y3D3 137 aaKnown RBP8.9□□□□□ -0.98
HDAC1-209ENST00000484305 ICOSQ9Y6W8 199 aa8.9□□□□□ -0.98
HDAC1-209ENST00000484305 TRGV4A0A0C4DH28 118 aa8.89□□□□□ -0.99
HDAC1-209ENST00000484305 A0A0D9SG52 128 aa8.89□□□□□ -0.99
HDAC1-209ENST00000484305 FBLL1A6NHQ2 334 aaKnown RBP8.89□□□□□ -0.99
HDAC1-209ENST00000484305 SLAQ13239 276 aa8.89□□□□□ -0.99
HDAC1-209ENST00000484305 ZFP69Q49AA0 526 aa8.89□□□□□ -0.99
HDAC1-209ENST00000484305 SMUG1Q53HV7 270 aa8.89□□□□□ -0.99
HDAC1-209ENST00000484305 SAPCD1Q5SSQ6 148 aa8.89□□□□□ -0.99
HDAC1-209ENST00000484305 ZNF471Q9BX82 626 aaPredicted RBP8.89□□□□□ -0.99
HDAC1-209ENST00000484305 NKX6-2Q9C056 277 aaPredicted RBP8.89□□□□□ -0.99
HDAC1-209ENST00000484305 ARL2-SNX15V9GYD0 113 aa8.89□□□□□ -0.99
HDAC1-209ENST00000484305 TRAV4A0A0B4J268 109 aa8.88□□□□□ -0.99
HDAC1-209ENST00000484305 PEX7O00628 323 aa8.88□□□□□ -0.99
HDAC1-209ENST00000484305 BCL2L11O43521 198 aa8.88□□□□□ -0.99
HDAC1-209ENST00000484305 SEC11BP0C7V7 166 aa8.88□□□□□ -0.99
HDAC1-209ENST00000484305 OR4C5Q8NGB2 326 aa8.88□□□□□ -0.99
HDAC1-209ENST00000484305 KRTAP1-5Q9BYS1 174 aa8.88□□□□□ -0.99
HDAC1-209ENST00000484305 KANTRA0A1W2PQU2 76 aa8.87□□□□□ -0.99
HDAC1-209ENST00000484305 C9JCJ5 164 aa8.87□□□□□ -0.99
HDAC1-209ENST00000484305 LCE2BO14633 110 aa8.87□□□□□ -0.99
HDAC1-209ENST00000484305 PPT1P50897 306 aa8.87□□□□□ -0.99
HDAC1-209ENST00000484305 MRPL23Q16540 153 aaKnown RBP8.87□□□□□ -0.99
HDAC1-209ENST00000484305 C6orf223Q8N319 242 aa8.87□□□□□ -0.99
HDAC1-209ENST00000484305 STOML3Q8TAV4 291 aa8.87□□□□□ -0.99
HDAC1-209ENST00000484305 HIST1H2BAQ96A08 127 aa8.87□□□□□ -0.99
HDAC1-209ENST00000484305 PKD1P98161 4303 aa8.86□□□□□ -0.99
HDAC1-209ENST00000484305 K7EQD1 137 aa8.86□□□□□ -0.99
HDAC1-209ENST00000484305 ZNF876PQ49A33 203 aa8.86□□□□□ -0.99
HDAC1-209ENST00000484305 CST9LP1Q5W188 147 aa8.86□□□□□ -0.99
HDAC1-209ENST00000484305 TMUB2Q71RG4 321 aa8.86□□□□□ -0.99
HDAC1-209ENST00000484305 Q86TA4 180 aa8.86□□□□□ -0.99
HDAC1-209ENST00000484305 FAM213BQ8TBF2 198 aa8.86□□□□□ -0.99
HDAC1-209ENST00000484305 SFT2D1Q8WV19 159 aa8.86□□□□□ -0.99
HDAC1-209ENST00000484305 MBD3L1Q8WWY6 194 aa8.86□□□□□ -0.99
HDAC1-209ENST00000484305 C9orf85Q96MD7 179 aa8.86□□□□□ -0.99
HDAC1-209ENST00000484305 IGKV3D-20A0A0C4DH25 116 aa8.85□□□□□ -0.99
HDAC1-209ENST00000484305 A0A1B0GV50 99 aa8.85□□□□□ -0.99
HDAC1-209ENST00000484305 FABP5P3A8MUU1 101 aa8.85□□□□□ -0.99
HDAC1-209ENST00000484305 UMAD1C9J7I0 102 aa8.85□□□□□ -0.99
HDAC1-209ENST00000484305 PAGE4O60829 102 aa8.85□□□□□ -0.99
HDAC1-209ENST00000484305 RNASE3P12724 160 aaKnown RBP8.85□□□□□ -0.99
HDAC1-209ENST00000484305 GYPEP15421 78 aa8.85□□□□□ -0.99
HDAC1-209ENST00000484305 TNP2Q05952 138 aa8.85□□□□□ -0.99
HDAC1-209ENST00000484305 LYPD5Q6UWN5 251 aa8.85□□□□□ -0.99
HDAC1-209ENST00000484305 DPPA3Q6W0C5 159 aa8.85□□□□□ -0.99
HDAC1-209ENST00000484305 NEGR1Q7Z3B1 354 aa8.85□□□□□ -0.99
HDAC1-209ENST00000484305 ZC2HC1AQ96GY0 325 aa8.85□□□□□ -0.99
HDAC1-209ENST00000484305 LOC100131303A0A0U1RQF7 123 aa8.84□□□□□ -0.99
HDAC1-209ENST00000484305 PGPEP1LA6NFU8 196 aa8.84□□□□□ -0.99
HDAC1-209ENST00000484305 SIVA1O15304 175 aa8.84□□□□□ -0.99
HDAC1-209ENST00000484305 PFDN1O60925 122 aa8.84□□□□□ -0.99
HDAC1-209ENST00000484305 NXPH4O95158 308 aa8.84□□□□□ -0.99
HDAC1-209ENST00000484305 SRIP30626 198 aa8.84□□□□□ -0.99
HDAC1-209ENST00000484305 CRIP1P50238 77 aa8.84□□□□□ -0.99
HDAC1-209ENST00000484305 TTC32Q5I0X7 151 aa8.84□□□□□ -0.99
HDAC1-209ENST00000484305 CFAP126Q5VTH2 177 aa8.84□□□□□ -0.99
HDAC1-209ENST00000484305 FMC1Q96HJ9 113 aa8.84□□□□□ -0.99
HDAC1-209ENST00000484305 PKHD1P08F94 4074 aa8.83□□□□□ -1
HDAC1-209ENST00000484305 A0A1W2PPQ1 181 aa8.83□□□□□ -1
HDAC1-209ENST00000484305 RS1O15537 224 aa8.83□□□□□ -1
HDAC1-209ENST00000484305 ORM1P02763 201 aa8.83□□□□□ -1
HDAC1-209ENST00000484305 GATA1P15976 413 aaPredicted RBP8.83□□□□□ -1
HDAC1-209ENST00000484305 UBE2G1P62253 170 aa8.83□□□□□ -1
HDAC1-209ENST00000484305 EIF5AP63241 154 aaKnown RBP8.83□□□□□ -1
HDAC1-209ENST00000484305 ZNF506Q5JVG8 444 aa8.83□□□□□ -1
HDAC1-209ENST00000484305 COX8CQ7Z4L0 72 aa8.83□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 96.4 ms