RNA–Protein interactions for RNA: ENST00000482647.5

SEC13-217, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 2

Gene SEC13, Length 782 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-217ENST00000482647 APLNQ9ULZ1 77 aa14.8□□□□□ -0.04
SEC13-217ENST00000482647 BOLA1Q9Y3E2 137 aa14.8□□□□□ -0.04
SEC13-217ENST00000482647 TRBV6-1A0A0K0K1D8 114 aa14.79□□□□□ -0.04
SEC13-217ENST00000482647 S100A9P06702 114 aaKnown RBP14.79□□□□□ -0.04
SEC13-217ENST00000482647 AKR1C3P42330 323 aa14.79□□□□□ -0.04
SEC13-217ENST00000482647 ALKAL2Q6UX46 152 aa14.79□□□□□ -0.04
SEC13-217ENST00000482647 Q6ZTI0 123 aa14.79□□□□□ -0.04
SEC13-217ENST00000482647 NDUFAF3Q9BU61 184 aa14.79□□□□□ -0.04
SEC13-217ENST00000482647 SDF2L1Q9HCN8 221 aa14.79□□□□□ -0.04
SEC13-217ENST00000482647 DNAH1Q9P2D7 4330 aa14.78□□□□□ -0.04
SEC13-217ENST00000482647 TRGV1A0A0A0MS02 117 aa14.78□□□□□ -0.04
SEC13-217ENST00000482647 SPINK4O60575 86 aa14.78□□□□□ -0.04
SEC13-217ENST00000482647 LGALS9BQ3B8N2 356 aa14.78□□□□□ -0.04
SEC13-217ENST00000482647 LINC00476Q8WZB0 136 aa14.78□□□□□ -0.04
SEC13-217ENST00000482647 TXNDC17Q9BRA2 123 aa14.78□□□□□ -0.04
SEC13-217ENST00000482647 MDFICQ9P1T7 246 aa14.78□□□□□ -0.04
SEC13-217ENST00000482647 TRGV2A0A075B6R0 118 aa14.77□□□□□ -0.05
SEC13-217ENST00000482647 F5H768 121 aa14.77□□□□□ -0.05
SEC13-217ENST00000482647 GNRH2O43555 120 aa14.77□□□□□ -0.05
SEC13-217ENST00000482647 IFNA1P01562 189 aa14.77□□□□□ -0.05
SEC13-217ENST00000482647 ALMS1Q8TCU4 4167 aa14.76□□□□□ -0.05
SEC13-217ENST00000482647 SCO2A0A1W2PP80 73 aa14.76□□□□□ -0.05
SEC13-217ENST00000482647 FABP5P3A8MUU1 101 aa14.76□□□□□ -0.05
SEC13-217ENST00000482647 LY6G6CO95867 125 aa14.76□□□□□ -0.05
SEC13-217ENST00000482647 LTAP01374 205 aa14.76□□□□□ -0.05
SEC13-217ENST00000482647 BLOC1S1P78537 153 aa14.76□□□□□ -0.05
SEC13-217ENST00000482647 COX8CQ7Z4L0 72 aa14.76□□□□□ -0.05
SEC13-217ENST00000482647 SPXQ9BT56 116 aa14.76□□□□□ -0.05
SEC13-217ENST00000482647 LGALS9CQ6DKI2 356 aa14.75□□□□□ -0.05
SEC13-217ENST00000482647 C18orf15Q96N68 181 aa14.75□□□□□ -0.05
SEC13-217ENST00000482647 IGHV3-16A0A0C4DH30 117 aa14.74□□□□□ -0.05
SEC13-217ENST00000482647 TYMSP04818 313 aa14.74□□□□□ -0.05
SEC13-217ENST00000482647 TMEM88Q6PEY1 159 aa14.74□□□□□ -0.05
SEC13-217ENST00000482647 ZC2HC1AQ96GY0 325 aa14.74□□□□□ -0.05
SEC13-217ENST00000482647 C11orf21Q9P2W6 132 aa14.74□□□□□ -0.05
SEC13-217ENST00000482647 TAGLN2P37802 199 aaKnown RBP14.73□□□□□ -0.05
SEC13-217ENST00000482647 MEF2BQ02080 365 aaPredicted RBP14.73□□□□□ -0.05
SEC13-217ENST00000482647 MRPL16Q9NX20 251 aaKnown RBP14.73□□□□□ -0.05
SEC13-217ENST00000482647 HYDINQ4G0P3 5121 aa14.73□□□□□ -0.05
SEC13-217ENST00000482647 PDE6DO43924 150 aa14.72□□□□□ -0.05
SEC13-217ENST00000482647 BCL2P10415 239 aa14.72□□□□□ -0.05
SEC13-217ENST00000482647 FAM162BQ5T6X4 162 aa14.72□□□□□ -0.05
SEC13-217ENST00000482647 C11orf52Q96A22 123 aa14.72□□□□□ -0.05
SEC13-217ENST00000482647 VAX2Q9UIW0 290 aa14.72□□□□□ -0.05
SEC13-217ENST00000482647 CRIP1P50238 77 aa14.71□□□□□ -0.05
SEC13-217ENST00000482647 OR5I1Q13606 314 aa14.71□□□□□ -0.05
SEC13-217ENST00000482647 BAGE2Q86Y30 109 aa14.71□□□□□ -0.05
SEC13-217ENST00000482647 RASL10AQ92737 203 aa14.71□□□□□ -0.05
SEC13-217ENST00000482647 M0R2P5 195 aa14.7□□□□□ -0.06
SEC13-217ENST00000482647 ORM1P02763 201 aa14.7□□□□□ -0.06
SEC13-217ENST00000482647 RPL35P42766 123 aaKnown RBP14.7□□□□□ -0.06
SEC13-217ENST00000482647 C15orf53Q8NAA6 179 aa14.7□□□□□ -0.06
SEC13-217ENST00000482647 IGKV3D-20A0A0C4DH25 116 aa14.69□□□□□ -0.06
SEC13-217ENST00000482647 SH2D1AO60880 128 aa14.69□□□□□ -0.06
SEC13-217ENST00000482647 HOXA5P20719 270 aa14.69□□□□□ -0.06
SEC13-217ENST00000482647 ZNF674Q2M3X9 581 aa14.69□□□□□ -0.06
SEC13-217ENST00000482647 NHLRC2Q8NBF2 726 aa14.69□□□□□ -0.06
SEC13-217ENST00000482647 LYPD6BQ8NI32 183 aa14.69□□□□□ -0.06
SEC13-217ENST00000482647 P0DMU3 169 aa14.68□□□□□ -0.06
SEC13-217ENST00000482647 FAM231AP0DMU4 169 aa14.68□□□□□ -0.06
SEC13-217ENST00000482647 FAM231CP0DMU5 169 aa14.68□□□□□ -0.06
SEC13-217ENST00000482647 MED9Q9NWA0 146 aa14.68□□□□□ -0.06
SEC13-217ENST00000482647 VPS13DQ5THJ4 4388 aa14.67□□□□□ -0.06
SEC13-217ENST00000482647 TRAV26-1A0A087WT03 109 aa14.67□□□□□ -0.06
SEC13-217ENST00000482647 B4DEV8 164 aa14.67□□□□□ -0.06
SEC13-217ENST00000482647 MLST8Q9BVC4 326 aa14.67□□□□□ -0.06
SEC13-217ENST00000482647 IGHV3-53P01767 116 aa14.66□□□□□ -0.06
SEC13-217ENST00000482647 S100A4P26447 101 aaKnown RBP14.66□□□□□ -0.06
SEC13-217ENST00000482647 DERL1Q9BUN8 251 aa14.66□□□□□ -0.06
SEC13-217ENST00000482647 KRBOX1C9JBD0 128 aa14.65□□□□□ -0.06
SEC13-217ENST00000482647 M0R036 132 aa14.65□□□□□ -0.06
SEC13-217ENST00000482647 NUDT3O95989 172 aa14.65□□□□□ -0.06
SEC13-217ENST00000482647 ASIPP42127 132 aa14.65□□□□□ -0.06
SEC13-217ENST00000482647 C9orf85Q96MD7 179 aa14.65□□□□□ -0.06
SEC13-217ENST00000482647 RBFOX3A6NFN3 312 aa14.64□□□□□ -0.07
SEC13-217ENST00000482647 RNASE3P12724 160 aaKnown RBP14.64□□□□□ -0.07
SEC13-217ENST00000482647 ZNF876PQ49A33 203 aa14.64□□□□□ -0.07
SEC13-217ENST00000482647 CENPWQ5EE01 88 aa14.64□□□□□ -0.07
SEC13-217ENST00000482647 TEX261Q6UWH6 196 aa14.64□□□□□ -0.07
SEC13-217ENST00000482647 PTH2Q96A98 100 aa14.64□□□□□ -0.07
SEC13-217ENST00000482647 A0A0J9YY99 117 aa14.63□□□□□ -0.07
SEC13-217ENST00000482647 C9JCJ5 164 aa14.63□□□□□ -0.07
SEC13-217ENST00000482647 H3BNG1 76 aa14.63□□□□□ -0.07
SEC13-217ENST00000482647 GNG4P50150 75 aa14.63□□□□□ -0.07
SEC13-217ENST00000482647 SLAQ13239 276 aa14.63□□□□□ -0.07
SEC13-217ENST00000482647 LINC01559Q495D7 138 aa14.63□□□□□ -0.07
SEC13-217ENST00000482647 OR4C5Q8NGB2 326 aa14.63□□□□□ -0.07
SEC13-217ENST00000482647 RAB19A4D1S5 217 aa14.62□□□□□ -0.07
SEC13-217ENST00000482647 DNLZQ5SXM8 178 aa14.62□□□□□ -0.07
SEC13-217ENST00000482647 POM121L12Q8N7R1 296 aa14.62□□□□□ -0.07
SEC13-217ENST00000482647 IL36BQ9NZH7 164 aa14.62□□□□□ -0.07
SEC13-217ENST00000482647 TRAV4A0A0B4J268 109 aa14.61□□□□□ -0.07
SEC13-217ENST00000482647 TRGV4A0A0C4DH28 118 aa14.61□□□□□ -0.07
SEC13-217ENST00000482647 GRIFINA4D1Z8 144 aa14.61□□□□□ -0.07
SEC13-217ENST00000482647 FHL2Q14192 279 aa14.61□□□□□ -0.07
SEC13-217ENST00000482647 ZNF506Q5JVG8 444 aa14.61□□□□□ -0.07
SEC13-217ENST00000482647 PRR27Q6MZM9 219 aa14.61□□□□□ -0.07
SEC13-217ENST00000482647 UBE2DNLQ8IWF7 75 aa14.61□□□□□ -0.07
SEC13-217ENST00000482647 SMIM12Q96EX1 92 aa14.61□□□□□ -0.07
SEC13-217ENST00000482647 ZNF479Q96JC4 524 aa14.61□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 167.4 ms