RNA–Protein interactions for RNA: ENST00000482590.1

CLK1-212, Transcript of CDC like kinase 1, humanhuman

TSL 2

Gene CLK1, Length 626 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-212ENST00000482590 LINC01587Q99440 93 aa4.61□□□□□ -1.67
CLK1-212ENST00000482590 SLC25A2Q9BXI2 301 aa4.61□□□□□ -1.67
CLK1-212ENST00000482590 DUSP21Q9H596 190 aa4.61□□□□□ -1.67
CLK1-212ENST00000482590 NDUFB11Q9NX14 153 aa4.61□□□□□ -1.67
CLK1-212ENST00000482590 SPANXCQ9NY87 97 aa4.61□□□□□ -1.67
CLK1-212ENST00000482590 TAS2R8Q9NYW2 309 aa4.61□□□□□ -1.67
CLK1-212ENST00000482590 DHRS4-AS1Q9P1J3 65 aa4.61□□□□□ -1.67
CLK1-212ENST00000482590 TRBV7-1A0A0A6YYK4 115 aa4.6□□□□□ -1.67
CLK1-212ENST00000482590 TRDV1A0A1B0GX56 115 aa4.6□□□□□ -1.67
CLK1-212ENST00000482590 TMEM235A6NFC5 223 aa4.6□□□□□ -1.67
CLK1-212ENST00000482590 KRTAP4-16G5E9R7 235 aaPredicted RBP4.6□□□□□ -1.67
CLK1-212ENST00000482590 PGAM2P15259 253 aa4.6□□□□□ -1.67
CLK1-212ENST00000482590 S100PP25815 95 aa4.6□□□□□ -1.67
CLK1-212ENST00000482590 S100A7P31151 101 aa4.6□□□□□ -1.67
CLK1-212ENST00000482590 HERVK_113P61574 105 aa4.6□□□□□ -1.67
CLK1-212ENST00000482590 RPL30P62888 115 aaKnown RBP4.6□□□□□ -1.67
CLK1-212ENST00000482590 GNG5P63218 68 aa4.6□□□□□ -1.67
CLK1-212ENST00000482590 ERCC8Q13216 396 aa4.6□□□□□ -1.67
CLK1-212ENST00000482590 RBMY1FQ15415 496 aaKnown RBP4.6□□□□□ -1.67
CLK1-212ENST00000482590 DEFB135Q30KP9 77 aa4.6□□□□□ -1.67
CLK1-212ENST00000482590 TIMM50Q3ZCQ8 353 aa4.6□□□□□ -1.67
CLK1-212ENST00000482590 LEMD1Q68G75 181 aa4.6□□□□□ -1.67
CLK1-212ENST00000482590 FAM24BQ8N5W8 94 aa4.6□□□□□ -1.67
CLK1-212ENST00000482590 OR4A5Q8NH83 315 aa4.6□□□□□ -1.67
CLK1-212ENST00000482590 COMMD5Q9GZQ3 224 aa4.6□□□□□ -1.67
CLK1-212ENST00000482590 UQCC1Q9NVA1 299 aa4.6□□□□□ -1.67
CLK1-212ENST00000482590 BET1LQ9NYM9 111 aa4.6□□□□□ -1.67
CLK1-212ENST00000482590 IGLV11-55A0A075B6I3 123 aa4.59□□□□□ -1.67
CLK1-212ENST00000482590 TRAV26-2A0A0B4J265 109 aa4.59□□□□□ -1.67
CLK1-212ENST00000482590 IGHV3-35A0A0C4DH35 117 aa4.59□□□□□ -1.67
CLK1-212ENST00000482590 A0A0J9YWU9 116 aa4.59□□□□□ -1.67
CLK1-212ENST00000482590 E7EUB6 86 aa4.59□□□□□ -1.67
CLK1-212ENST00000482590 INMT-MINDY4F8WBC2 141 aa4.59□□□□□ -1.67
CLK1-212ENST00000482590 TMEM250H0YL14 139 aa4.59□□□□□ -1.67
CLK1-212ENST00000482590 GATA2P23769 480 aaPredicted RBP4.59□□□□□ -1.67
CLK1-212ENST00000482590 IL15RAQ13261 267 aa4.59□□□□□ -1.67
CLK1-212ENST00000482590 RNF212Q495C1 297 aa4.59□□□□□ -1.67
CLK1-212ENST00000482590 DNAH10Q8IVF4 4471 aa4.59□□□□□ -1.67
CLK1-212ENST00000482590 OR10G4Q8NGN3 311 aa4.59□□□□□ -1.67
CLK1-212ENST00000482590 CNBD2Q96M20 576 aa4.59□□□□□ -1.67
CLK1-212ENST00000482590 CCDC32Q9BV29 185 aa4.59□□□□□ -1.67
CLK1-212ENST00000482590 EIF5A2Q9GZV4 153 aaKnown RBP4.59□□□□□ -1.67
CLK1-212ENST00000482590 KLK5Q9Y337 293 aaPredicted RBP4.59□□□□□ -1.67
CLK1-212ENST00000482590 KMT2AQ03164 3969 aa4.58□□□□□ -1.68
CLK1-212ENST00000482590 IGLV8-61A0A075B6I0 122 aa4.58□□□□□ -1.68
CLK1-212ENST00000482590 A0A1B0GW64 132 aa4.58□□□□□ -1.68
CLK1-212ENST00000482590 ISLRO14498 428 aa4.58□□□□□ -1.68
CLK1-212ENST00000482590 RBFOX2O43251 390 aaKnown RBP eCLIP4.58□□□□□ -1.68
CLK1-212ENST00000482590 DLEU1O43261 78 aa4.58□□□□□ -1.68
CLK1-212ENST00000482590 PPYP01298 95 aa4.58□□□□□ -1.68
CLK1-212ENST00000482590 MP68P56378 58 aa4.58□□□□□ -1.68
CLK1-212ENST00000482590 FXYD4P59646 89 aa4.58□□□□□ -1.68
CLK1-212ENST00000482590 GABARAPL2P60520 117 aa4.58□□□□□ -1.68
CLK1-212ENST00000482590 RPL23P62829 140 aaKnown RBP4.58□□□□□ -1.68
CLK1-212ENST00000482590 MSMO1Q15800 293 aa4.58□□□□□ -1.68
CLK1-212ENST00000482590 AADACL3Q5VUY0 350 aa4.58□□□□□ -1.68
CLK1-212ENST00000482590 UNQ9165/PRO28630Q6UXU0 137 aa4.58□□□□□ -1.68
CLK1-212ENST00000482590 IZUMO2Q6UXV1 221 aa4.58□□□□□ -1.68
CLK1-212ENST00000482590 FAM19A3Q7Z5A8 133 aa4.58□□□□□ -1.68
CLK1-212ENST00000482590 HSD17B13Q7Z5P4 300 aaPredicted RBP4.58□□□□□ -1.68
CLK1-212ENST00000482590 PRNTQ86SH4 94 aa4.58□□□□□ -1.68
CLK1-212ENST00000482590 Q8NBF4 154 aa4.58□□□□□ -1.68
CLK1-212ENST00000482590 OR51H1Q8NH63 302 aa4.58□□□□□ -1.68
CLK1-212ENST00000482590 RPUSD4Q96CM3 377 aaKnown RBP4.58□□□□□ -1.68
CLK1-212ENST00000482590 SSR3Q9UNL2 185 aa4.58□□□□□ -1.68
CLK1-212ENST00000482590 HERC2O95714 4834 aa4.58□□□□□ -1.68
CLK1-212ENST00000482590 A0A087WX48 190 aa4.57□□□□□ -1.68
CLK1-212ENST00000482590 IGLC7A0M8Q6 106 aa4.57□□□□□ -1.68
CLK1-212ENST00000482590 OR2T8A6NH00 312 aa4.57□□□□□ -1.68
CLK1-212ENST00000482590 DNASE2O00115 360 aaPredicted RBP4.57□□□□□ -1.68
CLK1-212ENST00000482590 NDUFA4O00483 81 aa4.57□□□□□ -1.68
CLK1-212ENST00000482590 ZNF207O43670 478 aaKnown RBP4.57□□□□□ -1.68
CLK1-212ENST00000482590 ZNF253O75346 499 aa4.57□□□□□ -1.68
CLK1-212ENST00000482590 CXCL6P80162 114 aa4.57□□□□□ -1.68
CLK1-212ENST00000482590 EIF4EBP1Q13541 118 aaPredicted RBP4.57□□□□□ -1.68
CLK1-212ENST00000482590 FCN2Q15485 313 aa4.57□□□□□ -1.68
CLK1-212ENST00000482590 KLK9Q2XQG4 91 aa4.57□□□□□ -1.68
CLK1-212ENST00000482590 UBE2NLQ5JXB2 153 aa4.57□□□□□ -1.68
CLK1-212ENST00000482590 GDPD1Q8N9F7 314 aa4.57□□□□□ -1.68
CLK1-212ENST00000482590 LSM10Q969L4 123 aaKnown RBP4.57□□□□□ -1.68
CLK1-212ENST00000482590 FAM104AQ969W3 186 aa4.57□□□□□ -1.68
CLK1-212ENST00000482590 C12orf57Q99622 126 aa4.57□□□□□ -1.68
CLK1-212ENST00000482590 VPS25Q9BRG1 176 aa4.57□□□□□ -1.68
CLK1-212ENST00000482590 PBDC1Q9BVG4 233 aa4.57□□□□□ -1.68
CLK1-212ENST00000482590 ZNF436Q9C0F3 470 aaPredicted RBP4.57□□□□□ -1.68
CLK1-212ENST00000482590 TMEM222Q9H0R3 208 aa4.57□□□□□ -1.68
CLK1-212ENST00000482590 DAZ1Q9NQZ3 744 aaKnown RBP4.57□□□□□ -1.68
CLK1-212ENST00000482590 TXNL4BQ9NX01 149 aaKnown RBP4.57□□□□□ -1.68
CLK1-212ENST00000482590 COPZ2Q9P299 210 aa4.57□□□□□ -1.68
CLK1-212ENST00000482590 KLK9Q9UKQ9 250 aa4.57□□□□□ -1.68
CLK1-212ENST00000482590 AGRNO00468 2067 aa4.57□□□□□ -1.68
CLK1-212ENST00000482590 TRAV8-1A0A0A6YYK1 113 aa4.56□□□□□ -1.68
CLK1-212ENST00000482590 TRAV3A0A0B4J244 114 aa4.56□□□□□ -1.68
CLK1-212ENST00000482590 MRPS14O60783 128 aaKnown RBP4.56□□□□□ -1.68
CLK1-212ENST00000482590 TRAPPC2P0DI81 140 aa4.56□□□□□ -1.68
CLK1-212ENST00000482590 TRAPPC2BP0DI82 140 aa4.56□□□□□ -1.68
CLK1-212ENST00000482590 ORMDL2Q53FV1 153 aa4.56□□□□□ -1.68
CLK1-212ENST00000482590 Q56UQ5 140 aa4.56□□□□□ -1.68
CLK1-212ENST00000482590 CEMP1Q6PRD7 247 aaPredicted RBP4.56□□□□□ -1.68
CLK1-212ENST00000482590 ZNF818PQ6ZRF7 136 aa4.56□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 82.8 ms