RNA–Protein interactions for RNA: ENST00000478349.6

SMARCE1-209, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 5

Gene SMARCE1, Length 1,090 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-209ENST00000478349 TREM1Q9NP99 234 aa9.88□□□□□ -0.83
SMARCE1-209ENST00000478349 CIDEAO60543 219 aa9.87□□□□□ -0.83
SMARCE1-209ENST00000478349 SFTA3P0C7M3 94 aa9.87□□□□□ -0.83
SMARCE1-209ENST00000478349 KRTAP10-2P60368 255 aa9.87□□□□□ -0.83
SMARCE1-209ENST00000478349 ZFP69Q49AA0 526 aa9.87□□□□□ -0.83
SMARCE1-209ENST00000478349 Q6ZQT7 251 aa9.87□□□□□ -0.83
SMARCE1-209ENST00000478349 Q6ZRN7 208 aaPredicted RBP9.87□□□□□ -0.83
SMARCE1-209ENST00000478349 OR10G9Q8NGN4 311 aa9.87□□□□□ -0.83
SMARCE1-209ENST00000478349 OR10G7Q8NGN6 311 aa9.87□□□□□ -0.83
SMARCE1-209ENST00000478349 MSRB1Q9NZV6 116 aa9.87□□□□□ -0.83
SMARCE1-209ENST00000478349 DYNC1H1Q14204 4646 aaKnown RBP9.87□□□□□ -0.83
SMARCE1-209ENST00000478349 MBP02144 154 aa9.86□□□□□ -0.83
SMARCE1-209ENST00000478349 CDC34P49427 236 aaPredicted RBP9.86□□□□□ -0.83
SMARCE1-209ENST00000478349 PPT1P50897 306 aa9.86□□□□□ -0.83
SMARCE1-209ENST00000478349 IFITM3Q01628 133 aa9.86□□□□□ -0.83
SMARCE1-209ENST00000478349 C5orf17Q8NAS9 161 aa9.86□□□□□ -0.83
SMARCE1-209ENST00000478349 NHLRC2Q8NBF2 726 aa9.86□□□□□ -0.83
SMARCE1-209ENST00000478349 ASB13Q8WXK3 278 aa9.86□□□□□ -0.83
SMARCE1-209ENST00000478349 SCRT2Q9NQ03 307 aa9.86□□□□□ -0.83
SMARCE1-209ENST00000478349 IGHV3-16A0A0C4DH30 117 aa9.85□□□□□ -0.83
SMARCE1-209ENST00000478349 FBLL1A6NHQ2 334 aaKnown RBP9.85□□□□□ -0.83
SMARCE1-209ENST00000478349 TIRAPP58753 221 aa9.85□□□□□ -0.83
SMARCE1-209ENST00000478349 RAB2AP61019 212 aa9.85□□□□□ -0.83
SMARCE1-209ENST00000478349 SH3BGRL3Q9H299 93 aa9.85□□□□□ -0.83
SMARCE1-209ENST00000478349 F6UZH7 168 aa9.84□□□□□ -0.83
SMARCE1-209ENST00000478349 PFN1P07737 140 aaKnown RBP9.84□□□□□ -0.83
SMARCE1-209ENST00000478349 DNAH10OSP0CZ25 163 aa9.84□□□□□ -0.83
SMARCE1-209ENST00000478349 OR2G3Q8NGZ4 309 aa9.84□□□□□ -0.83
SMARCE1-209ENST00000478349 PRADC1Q9BSG0 188 aa9.84□□□□□ -0.83
SMARCE1-209ENST00000478349 PSMG3Q9BT73 122 aaPredicted RBP9.84□□□□□ -0.83
SMARCE1-209ENST00000478349 KRTAP4-5Q9BYR2 181 aa9.84□□□□□ -0.83
SMARCE1-209ENST00000478349 TRAV8-6A0A0B4J262 113 aa9.83□□□□□ -0.84
SMARCE1-209ENST00000478349 A6NHS1 94 aa9.83□□□□□ -0.84
SMARCE1-209ENST00000478349 TAAR5O14804 337 aa9.83□□□□□ -0.84
SMARCE1-209ENST00000478349 TYMSP04818 313 aa9.83□□□□□ -0.84
SMARCE1-209ENST00000478349 CRYGDP07320 174 aa9.83□□□□□ -0.84
SMARCE1-209ENST00000478349 ARL14EPLP0DKL9 152 aa9.83□□□□□ -0.84
SMARCE1-209ENST00000478349 WFDC10BQ8IUB3 73 aa9.83□□□□□ -0.84
SMARCE1-209ENST00000478349 TMEM167BQ9NRX6 74 aa9.83□□□□□ -0.84
SMARCE1-209ENST00000478349 RYR1P21817 5038 aa9.83□□□□□ -0.84
SMARCE1-209ENST00000478349 A0A087WTM6 91 aa9.82□□□□□ -0.84
SMARCE1-209ENST00000478349 TRAV8-1A0A0A6YYK1 113 aa9.82□□□□□ -0.84
SMARCE1-209ENST00000478349 PSCAO43653 123 aa9.82□□□□□ -0.84
SMARCE1-209ENST00000478349 STAG3L2P0CL84 134 aa9.82□□□□□ -0.84
SMARCE1-209ENST00000478349 STAG3L3P0CL85 134 aa9.82□□□□□ -0.84
SMARCE1-209ENST00000478349 SERF2P84101 59 aa9.82□□□□□ -0.84
SMARCE1-209ENST00000478349 RHOHQ15669 191 aa9.82□□□□□ -0.84
SMARCE1-209ENST00000478349 ZNF876PQ49A33 203 aa9.82□□□□□ -0.84
SMARCE1-209ENST00000478349 HSD17B11Q8NBQ5 300 aa9.82□□□□□ -0.84
SMARCE1-209ENST00000478349 WFDC1Q9HC57 220 aa9.82□□□□□ -0.84
SMARCE1-209ENST00000478349 IGHV3-38A0A0C4DH36 116 aa9.81□□□□□ -0.84
SMARCE1-209ENST00000478349 EPM2AB3EWF7 344 aa9.81□□□□□ -0.84
SMARCE1-209ENST00000478349 GNRH2O43555 120 aa9.81□□□□□ -0.84
SMARCE1-209ENST00000478349 CXorf1O96002 111 aa9.81□□□□□ -0.84
SMARCE1-209ENST00000478349 TCRAP04437 139 aa9.81□□□□□ -0.84
SMARCE1-209ENST00000478349 GATA1P15976 413 aaPredicted RBP9.81□□□□□ -0.84
SMARCE1-209ENST00000478349 GNG5P63218 68 aa9.81□□□□□ -0.84
SMARCE1-209ENST00000478349 SMUG1Q53HV7 270 aa9.81□□□□□ -0.84
SMARCE1-209ENST00000478349 SAPCD1Q5SSQ6 148 aa9.81□□□□□ -0.84
SMARCE1-209ENST00000478349 AQP10Q96PS8 301 aa9.81□□□□□ -0.84
SMARCE1-209ENST00000478349 TRBV6-4A0A1B0GX49 114 aa9.8□□□□□ -0.84
SMARCE1-209ENST00000478349 HMGB3O15347 200 aaKnown RBP9.8□□□□□ -0.84
SMARCE1-209ENST00000478349 GCHFRP30047 84 aa9.8□□□□□ -0.84
SMARCE1-209ENST00000478349 CYB561D1Q8N8Q1 229 aa9.8□□□□□ -0.84
SMARCE1-209ENST00000478349 RAB24Q969Q5 203 aa9.8□□□□□ -0.84
SMARCE1-209ENST00000478349 ACTR3CQ9C0K3 210 aaPredicted RBP9.8□□□□□ -0.84
SMARCE1-209ENST00000478349 MED28Q9H204 178 aa9.8□□□□□ -0.84
SMARCE1-209ENST00000478349 BORCS7-ASMTA0A0B4J1R7 106 aa9.79□□□□□ -0.84
SMARCE1-209ENST00000478349 EIF3GO75821 320 aaKnown RBP eCLIP9.79□□□□□ -0.84
SMARCE1-209ENST00000478349 PTTG1O95997 202 aa9.79□□□□□ -0.84
SMARCE1-209ENST00000478349 GCGP01275 180 aa9.79□□□□□ -0.84
SMARCE1-209ENST00000478349 MGST1P10620 155 aaKnown RBP9.79□□□□□ -0.84
SMARCE1-209ENST00000478349 FLI1Q01543 452 aaPredicted RBP9.79□□□□□ -0.84
SMARCE1-209ENST00000478349 C4orf48Q5BLP8 95 aa9.79□□□□□ -0.84
SMARCE1-209ENST00000478349 LINC01556Q5JQF7 62 aa9.79□□□□□ -0.84
SMARCE1-209ENST00000478349 OR10J3Q5JRS4 329 aa9.79□□□□□ -0.84
SMARCE1-209ENST00000478349 TMEM75Q8N9X5 138 aa9.79□□□□□ -0.84
SMARCE1-209ENST00000478349 INO80EQ8NBZ0 244 aaPredicted RBP9.79□□□□□ -0.84
SMARCE1-209ENST00000478349 BATF3Q9NR55 127 aa9.79□□□□□ -0.84
SMARCE1-209ENST00000478349 PSG8Q9UQ74 426 aa9.79□□□□□ -0.84
SMARCE1-209ENST00000478349 ALG5Q9Y673 324 aa9.79□□□□□ -0.84
SMARCE1-209ENST00000478349 S100A4P26447 101 aaKnown RBP9.78□□□□□ -0.84
SMARCE1-209ENST00000478349 ATP6V0CP27449 155 aa9.78□□□□□ -0.84
SMARCE1-209ENST00000478349 SUN5Q8TC36 379 aa9.78□□□□□ -0.84
SMARCE1-209ENST00000478349 NTN5Q8WTR8 489 aaPredicted RBP9.78□□□□□ -0.84
SMARCE1-209ENST00000478349 FRZBQ92765 325 aa9.78□□□□□ -0.84
SMARCE1-209ENST00000478349 PTH2Q96A98 100 aa9.78□□□□□ -0.84
SMARCE1-209ENST00000478349 TVP23CQ96ET8 276 aa9.78□□□□□ -0.84
SMARCE1-209ENST00000478349 TNFSF18Q9UNG2 199 aa9.78□□□□□ -0.84
SMARCE1-209ENST00000478349 ABCA13Q86UQ4 5058 aa9.78□□□□□ -0.84
SMARCE1-209ENST00000478349 HSPG2P98160 4391 aa9.77□□□□□ -0.84
SMARCE1-209ENST00000478349 RS1O15537 224 aa9.77□□□□□ -0.85
SMARCE1-209ENST00000478349 SUMO1P63165 101 aaKnown RBP9.77□□□□□ -0.85
SMARCE1-209ENST00000478349 CFAP126Q5VTH2 177 aa9.77□□□□□ -0.85
SMARCE1-209ENST00000478349 SLC25A29Q8N8R3 303 aa9.77□□□□□ -0.85
SMARCE1-209ENST00000478349 EPDR1Q9UM22 224 aa9.77□□□□□ -0.85
SMARCE1-209ENST00000478349 TNFRSF18Q9Y5U5 241 aa9.77□□□□□ -0.85
SMARCE1-209ENST00000478349 LOC100131303A0A0U1RQF7 123 aa9.76□□□□□ -0.85
SMARCE1-209ENST00000478349 A0A1W2PRE2 83 aa9.76□□□□□ -0.85
SMARCE1-209ENST00000478349 GCSHP23434 173 aa9.76□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 53 ms