RNA–Protein interactions for RNA: ENST00000477583.1

CACUL1-202, Transcript of CDK2 associated cullin domain 1, humanhuman

TSL 1 (best)

Gene CACUL1, Length 432 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACUL1-202ENST00000477583 CCDC88CQ9P219 2028 aa0.79□□□□□ -2.28
CACUL1-202ENST00000477583 ATG2BQ96BY7 2078 aa0.79□□□□□ -2.28
CACUL1-202ENST00000477583 CACNA1CQ13936 2221 aa0.79□□□□□ -2.28
CACUL1-202ENST00000477583 UNC13CQ8NB66 2214 aa0.79□□□□□ -2.28
CACUL1-202ENST00000477583 URB1O60287 2271 aaKnown RBP0.78□□□□□ -2.28
CACUL1-202ENST00000477583 PTPRQQ9UMZ3 2332 aa0.78□□□□□ -2.28
CACUL1-202ENST00000477583 ACACBO00763 2458 aa0.78□□□□□ -2.28
CACUL1-202ENST00000477583 CACNA1AO00555 2505 aa0.78□□□□□ -2.28
CACUL1-202ENST00000477583 CUL9Q8IWT3 2517 aa0.78□□□□□ -2.28
CACUL1-202ENST00000477583 TLN1Q9Y490 2541 aaKnown RBP0.78□□□□□ -2.28
CACUL1-202ENST00000477583 MYO15AQ9UKN7 3530 aa0.78□□□□□ -2.28
CACUL1-202ENST00000477583 HEATR5AQ86XA9 2040 aa0.78□□□□□ -2.28
CACUL1-202ENST00000477583 FANCMQ8IYD8 2048 aa0.78□□□□□ -2.28
CACUL1-202ENST00000477583 NINQ8N4C6 2090 aa0.78□□□□□ -2.28
CACUL1-202ENST00000477583 FXYD6-FXYD2A0A087WZ82 144 aa0.78□□□□□ -2.28
CACUL1-202ENST00000477583 TRAV8-1A0A0A6YYK1 113 aa0.78□□□□□ -2.28
CACUL1-202ENST00000477583 BORCS7-ASMTA0A0B4J1R7 106 aa0.78□□□□□ -2.28
CACUL1-202ENST00000477583 C3orf85A0A1B0GTC6 90 aa0.78□□□□□ -2.28
CACUL1-202ENST00000477583 ODAMA1E959 279 aa0.78□□□□□ -2.28
CACUL1-202ENST00000477583 OOSP1A8MZH6 123 aa0.78□□□□□ -2.28
CACUL1-202ENST00000477583 C9JCJ5 164 aa0.78□□□□□ -2.28
CACUL1-202ENST00000477583 TRAPPC2LH3BP13 241 aa0.78□□□□□ -2.28
CACUL1-202ENST00000477583 I3L521 148 aa0.78□□□□□ -2.28
CACUL1-202ENST00000477583 M0R381 172 aa0.78□□□□□ -2.28
CACUL1-202ENST00000477583 CORTO00230 105 aa0.78□□□□□ -2.28
CACUL1-202ENST00000477583 SDCBPO00560 298 aaPredicted RBP0.78□□□□□ -2.28
CACUL1-202ENST00000477583 GEMIN2O14893 280 aaKnown RBP0.78□□□□□ -2.28
CACUL1-202ENST00000477583 UBE2L6O14933 153 aa0.78□□□□□ -2.28
CACUL1-202ENST00000477583 PGLYRP1O75594 196 aaPredicted RBP0.78□□□□□ -2.28
CACUL1-202ENST00000477583 OR2H2O95918 312 aa0.78□□□□□ -2.28
CACUL1-202ENST00000477583 CFDP00746 253 aaPredicted RBP0.78□□□□□ -2.28
CACUL1-202ENST00000477583 IFNA1P01562 189 aa0.78□□□□□ -2.28
CACUL1-202ENST00000477583 ORM1P02763 201 aa0.78□□□□□ -2.28
CACUL1-202ENST00000477583 MT-ND4LP03901 98 aa0.78□□□□□ -2.28
CACUL1-202ENST00000477583 TYMSP04818 313 aa0.78□□□□□ -2.28
CACUL1-202ENST00000477583 IFNA4P05014 189 aa0.78□□□□□ -2.28
CACUL1-202ENST00000477583 S100A8P05109 93 aa0.78□□□□□ -2.28
CACUL1-202ENST00000477583 GPX1P07203 203 aa0.78□□□□□ -2.28
CACUL1-202ENST00000477583 FREM3P0C091 2139 aa0.78□□□□□ -2.28
CACUL1-202ENST00000477583 LINC00614P0C842 121 aa0.78□□□□□ -2.28
CACUL1-202ENST00000477583 SMIM6P0DI80 62 aa0.78□□□□□ -2.28
CACUL1-202ENST00000477583 SPTBP11277 2137 aa0.78□□□□□ -2.28
CACUL1-202ENST00000477583 RPL12P30050 165 aaKnown RBP0.78□□□□□ -2.28
CACUL1-202ENST00000477583 SNCAP37840 140 aa0.78□□□□□ -2.28
CACUL1-202ENST00000477583 PI4KAP42356 2102 aa0.78□□□□□ -2.28
CACUL1-202ENST00000477583 RPS27P42677 84 aaKnown RBP0.78□□□□□ -2.28
CACUL1-202ENST00000477583 HAAOP46952 286 aa0.78□□□□□ -2.28
CACUL1-202ENST00000477583 SULT1A1P50225 295 aa0.78□□□□□ -2.28
CACUL1-202ENST00000477583 RAB13P51153 203 aa0.78□□□□□ -2.28
CACUL1-202ENST00000477583 AKR1D1P51857 326 aa0.78□□□□□ -2.28
CACUL1-202ENST00000477583 PIGPP57054 158 aa0.78□□□□□ -2.28
CACUL1-202ENST00000477583 TMEM33P57088 247 aa0.78□□□□□ -2.28
CACUL1-202ENST00000477583 POLR2GP62487 172 aaKnown RBP eCLIP0.78□□□□□ -2.28
CACUL1-202ENST00000477583 RPL19P84098 196 aaKnown RBP0.78□□□□□ -2.28
CACUL1-202ENST00000477583 ZNF90Q03938 601 aa0.78□□□□□ -2.28
CACUL1-202ENST00000477583 IAH1Q2TAA2 248 aaPredicted RBP0.78□□□□□ -2.28
CACUL1-202ENST00000477583 KLK9Q2XQG4 91 aa0.78□□□□□ -2.28
CACUL1-202ENST00000477583 HLA-DRB5Q30154 266 aa0.78□□□□□ -2.28
CACUL1-202ENST00000477583 SCGB2B2Q4G0G5 96 aa0.78□□□□□ -2.28
CACUL1-202ENST00000477583 TMEM155Q4W5P6 130 aa0.78□□□□□ -2.28
CACUL1-202ENST00000477583 KHDC3LQ587J8 217 aa0.78□□□□□ -2.28
CACUL1-202ENST00000477583 TEX36Q5VZQ5 186 aa0.78□□□□□ -2.28
CACUL1-202ENST00000477583 OR10K2Q6IF99 312 aa0.78□□□□□ -2.28
CACUL1-202ENST00000477583 HAGHLQ6PII5 290 aaPredicted RBP0.78□□□□□ -2.28
CACUL1-202ENST00000477583 TOMM20LQ6UXN7 152 aa0.78□□□□□ -2.28
CACUL1-202ENST00000477583 CYP2G1PQ6ZSU1 146 aa0.78□□□□□ -2.28
CACUL1-202ENST00000477583 Q6ZTI0 123 aa0.78□□□□□ -2.28
CACUL1-202ENST00000477583 C6orf201Q7Z4U5 140 aa0.78□□□□□ -2.28
CACUL1-202ENST00000477583 SPATA12Q7Z6I5 190 aa0.78□□□□□ -2.28
CACUL1-202ENST00000477583 COMMD7Q86VX2 200 aa0.78□□□□□ -2.28
CACUL1-202ENST00000477583 STX12Q86Y82 276 aa0.78□□□□□ -2.28
CACUL1-202ENST00000477583 LINC00311Q8N616 119 aa0.78□□□□□ -2.28
CACUL1-202ENST00000477583 ZNF565Q8N9K5 539 aa0.78□□□□□ -2.28
CACUL1-202ENST00000477583 SREK1IP1Q8N9Q2 155 aaPredicted RBP0.78□□□□□ -2.28
CACUL1-202ENST00000477583 FDCSPQ8NFU4 85 aa0.78□□□□□ -2.28
CACUL1-202ENST00000477583 OR10K1Q8NGX5 313 aa0.78□□□□□ -2.28
CACUL1-202ENST00000477583 OR10J5Q8NHC4 309 aa0.78□□□□□ -2.28
CACUL1-202ENST00000477583 VSTM2AQ8TAG5 236 aa0.78□□□□□ -2.28
CACUL1-202ENST00000477583 MBD3L1Q8WWY6 194 aa0.78□□□□□ -2.28
CACUL1-202ENST00000477583 PACRGQ96M98 296 aaPredicted RBP0.78□□□□□ -2.28
CACUL1-202ENST00000477583 IMMP2LQ96T52 175 aa0.78□□□□□ -2.28
CACUL1-202ENST00000477583 ADAT1Q9BUB4 502 aaKnown RBP0.78□□□□□ -2.28
CACUL1-202ENST00000477583 TMEM147Q9BVK8 224 aa0.78□□□□□ -2.28
CACUL1-202ENST00000477583 REG4Q9BYZ8 158 aa0.78□□□□□ -2.28
CACUL1-202ENST00000477583 WDR61Q9GZS3 305 aaKnown RBP0.78□□□□□ -2.28
CACUL1-202ENST00000477583 MANBALQ9NQG1 85 aa0.78□□□□□ -2.28
CACUL1-202ENST00000477583 SMCO4Q9NRQ5 59 aa0.78□□□□□ -2.28
CACUL1-202ENST00000477583 FKBP11Q9NYL4 201 aa0.78□□□□□ -2.28
CACUL1-202ENST00000477583 BET1LQ9NYM9 111 aa0.78□□□□□ -2.28
CACUL1-202ENST00000477583 DOK5Q9P104 306 aa0.78□□□□□ -2.28
CACUL1-202ENST00000477583 AK3Q9UIJ7 227 aa0.78□□□□□ -2.28
CACUL1-202ENST00000477583 KLK9Q9UKQ9 250 aa0.78□□□□□ -2.28
CACUL1-202ENST00000477583 FAM215AQ9Y5M1 114 aa0.78□□□□□ -2.28
CACUL1-202ENST00000477583 LINC00312Q9Y6C7 94 aa0.78□□□□□ -2.28
CACUL1-202ENST00000477583 LY96Q9Y6Y9 160 aa0.78□□□□□ -2.28
CACUL1-202ENST00000477583 SDK1Q7Z5N4 2213 aa0.78□□□□□ -2.28
CACUL1-202ENST00000477583 CACNA1BQ00975 2339 aa0.78□□□□□ -2.28
CACUL1-202ENST00000477583 TPRP12270 2363 aaKnown RBP0.78□□□□□ -2.28
CACUL1-202ENST00000477583 CHD9Q3L8U1 2897 aa0.78□□□□□ -2.29
CACUL1-202ENST00000477583 UNC80Q8N2C7 3258 aa0.77□□□□□ -2.29
Retrieved 100 of 20,778 RNA–protein pairs in 63.2 ms