RNA–Protein interactions for RNA: ENST00000477461.1

UBR3-209, Transcript of ubiquitin protein ligase E3 component n-recognin 3, humanhuman

TSL 4

Gene UBR3, Length 595 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR3-209ENST00000477461 SETD2Q9BYW2 2564 aaPredicted RBP2.56□□□□□ -2
UBR3-209ENST00000477461 IGKV3-7A0A075B6H7 116 aa2.56□□□□□ -2
UBR3-209ENST00000477461 TMEM213A2RRL7 107 aa2.56□□□□□ -2
UBR3-209ENST00000477461 MAP1LC3B2A6NCE7 125 aa2.56□□□□□ -2
UBR3-209ENST00000477461 FAM74A7A6NL05 159 aa2.56□□□□□ -2
UBR3-209ENST00000477461 PANO1I0J062 215 aa2.56□□□□□ -2
UBR3-209ENST00000477461 HMGB3O15347 200 aaKnown RBP2.56□□□□□ -2
UBR3-209ENST00000477461 CXorf1O96002 111 aa2.56□□□□□ -2
UBR3-209ENST00000477461 IFNA1P01562 189 aa2.56□□□□□ -2
UBR3-209ENST00000477461 HBE1P02100 147 aa2.56□□□□□ -2
UBR3-209ENST00000477461 CBLN1P23435 193 aa2.56□□□□□ -2
UBR3-209ENST00000477461 SULT1A2P50226 295 aa2.56□□□□□ -2
UBR3-209ENST00000477461 PPT1P50897 306 aa2.56□□□□□ -2
UBR3-209ENST00000477461 INSL3P51460 131 aa2.56□□□□□ -2
UBR3-209ENST00000477461 UBE2L3P68036 154 aaKnown RBP2.56□□□□□ -2
UBR3-209ENST00000477461 GUCA2BQ16661 112 aa2.56□□□□□ -2
UBR3-209ENST00000477461 KRTAP21-3Q3LHN1 58 aa2.56□□□□□ -2
UBR3-209ENST00000477461 FAM74A3Q4VXF1 159 aa2.56□□□□□ -2
UBR3-209ENST00000477461 FAM74A1Q5RGS3 127 aa2.56□□□□□ -2
UBR3-209ENST00000477461 C1orf194Q5T5A4 169 aa2.56□□□□□ -2
UBR3-209ENST00000477461 LCN12Q6JVE5 192 aa2.56□□□□□ -2
UBR3-209ENST00000477461 TEX261Q6UWH6 196 aa2.56□□□□□ -2
UBR3-209ENST00000477461 LCN15Q6UWW0 184 aa2.56□□□□□ -2
UBR3-209ENST00000477461 PATE2Q6UY27 113 aa2.56□□□□□ -2
UBR3-209ENST00000477461 IL34Q6ZMJ4 242 aa2.56□□□□□ -2
UBR3-209ENST00000477461 ZNF767PQ75MW2 155 aa2.56□□□□□ -2
UBR3-209ENST00000477461 MIR17HGQ75NE6 70 aa2.56□□□□□ -2
UBR3-209ENST00000477461 TCF24Q7RTU0 167 aa2.56□□□□□ -2
UBR3-209ENST00000477461 RPP25LQ8N5L8 163 aaKnown RBP2.56□□□□□ -2
UBR3-209ENST00000477461 ZNF680Q8NEM1 530 aa2.56□□□□□ -2
UBR3-209ENST00000477461 OR2K2Q8NGT1 345 aa2.56□□□□□ -2
UBR3-209ENST00000477461 SFT2D1Q8WV19 159 aa2.56□□□□□ -2
UBR3-209ENST00000477461 FAM104AQ969W3 186 aa2.56□□□□□ -2
UBR3-209ENST00000477461 SCRT1Q9BWW7 348 aa2.56□□□□□ -2
UBR3-209ENST00000477461 MAP1LC3BQ9GZQ8 125 aa2.56□□□□□ -2
UBR3-209ENST00000477461 OR51M1Q9H341 326 aa2.56□□□□□ -2
UBR3-209ENST00000477461 VSIRQ9H7M9 311 aa2.56□□□□□ -2
UBR3-209ENST00000477461 RPRMQ9NS64 109 aa2.56□□□□□ -2
UBR3-209ENST00000477461 ZMAT5Q9UDW3 170 aaKnown RBP2.56□□□□□ -2
UBR3-209ENST00000477461 CSMD1Q96PZ7 3565 aa2.55□□□□□ -2
UBR3-209ENST00000477461 TRAV5A0A0B4J249 113 aa2.55□□□□□ -2
UBR3-209ENST00000477461 TRAV25A0A0B4J276 109 aa2.55□□□□□ -2
UBR3-209ENST00000477461 A0A1B0GV50 99 aa2.55□□□□□ -2
UBR3-209ENST00000477461 A0A1B0GWB2 263 aa2.55□□□□□ -2
UBR3-209ENST00000477461 OR4C46A6NHA9 309 aa2.55□□□□□ -2
UBR3-209ENST00000477461 OR10J4P0C629 311 aa2.55□□□□□ -2
UBR3-209ENST00000477461 NBEAP1P0C6P0 100 aa2.55□□□□□ -2
UBR3-209ENST00000477461 STAG3L2P0CL84 134 aa2.55□□□□□ -2
UBR3-209ENST00000477461 STAG3L3P0CL85 134 aa2.55□□□□□ -2
UBR3-209ENST00000477461 ARL14EPLP0DKL9 152 aa2.55□□□□□ -2
UBR3-209ENST00000477461 PYYP10082 97 aa2.55□□□□□ -2
UBR3-209ENST00000477461 HIST1H1EP10412 219 aaKnown RBP2.55□□□□□ -2
UBR3-209ENST00000477461 GCHFRP30047 84 aa2.55□□□□□ -2
UBR3-209ENST00000477461 TFPI2P48307 235 aa2.55□□□□□ -2
UBR3-209ENST00000477461 PSMB3P49720 205 aa2.55□□□□□ -2
UBR3-209ENST00000477461 FGF8P55075 233 aaPredicted RBP2.55□□□□□ -2
UBR3-209ENST00000477461 CMC4P56277 68 aaPredicted RBP2.55□□□□□ -2
UBR3-209ENST00000477461 PSG9Q00887 426 aa2.55□□□□□ -2
UBR3-209ENST00000477461 LAGE3Q14657 143 aa2.55□□□□□ -2
UBR3-209ENST00000477461 GUK1Q16774 197 aa2.55□□□□□ -2
UBR3-209ENST00000477461 DEFB114Q30KQ6 69 aa2.55□□□□□ -2
UBR3-209ENST00000477461 SAMD13Q5VXD3 122 aa2.55□□□□□ -2
UBR3-209ENST00000477461 SPATA31B1PQ5VZV4 182 aa2.55□□□□□ -2
UBR3-209ENST00000477461 C7orf33Q8WU49 177 aa2.55□□□□□ -2
UBR3-209ENST00000477461 BLNKQ8WV28 456 aa2.55□□□□□ -2
UBR3-209ENST00000477461 MBD3L1Q8WWY6 194 aa2.55□□□□□ -2
UBR3-209ENST00000477461 SLC50A1Q9BRV3 221 aa2.55□□□□□ -2
UBR3-209ENST00000477461 SLC25A2Q9BXI2 301 aa2.55□□□□□ -2
UBR3-209ENST00000477461 MXRA5Q9NR99 2828 aa2.55□□□□□ -2
UBR3-209ENST00000477461 TMEM167BQ9NRX6 74 aa2.55□□□□□ -2
UBR3-209ENST00000477461 SIGLEC8Q9NYZ4 499 aa2.55□□□□□ -2
UBR3-209ENST00000477461 TMEM14CQ9P0S9 112 aa2.55□□□□□ -2
UBR3-209ENST00000477461 ATRQ13535 2644 aa2.55□□□□□ -2
UBR3-209ENST00000477461 SORL1Q92673 2214 aa2.54□□□□□ -2
UBR3-209ENST00000477461 TRBV19A0A075B6N1 114 aa2.54□□□□□ -2
UBR3-209ENST00000477461 TRAV2A0A0B4J234 112 aa2.54□□□□□ -2
UBR3-209ENST00000477461 TRAV1-1A0A0B4J248 108 aa2.54□□□□□ -2
UBR3-209ENST00000477461 ISLRO14498 428 aa2.54□□□□□ -2
UBR3-209ENST00000477461 ZNF861PO60384 105 aa2.54□□□□□ -2
UBR3-209ENST00000477461 EIF3GO75821 320 aaKnown RBP eCLIP2.54□□□□□ -2
UBR3-209ENST00000477461 IGLV1-51P01701 117 aa2.54□□□□□ -2
UBR3-209ENST00000477461 SLC25A5P05141 298 aaKnown RBP2.54□□□□□ -2
UBR3-209ENST00000477461 TAGLN2P37802 199 aaKnown RBP2.54□□□□□ -2
UBR3-209ENST00000477461 CSN1S1P47710 185 aa2.54□□□□□ -2
UBR3-209ENST00000477461 UBE2G2P60604 165 aa2.54□□□□□ -2
UBR3-209ENST00000477461 SNRPD3P62318 126 aaKnown RBP2.54□□□□□ -2
UBR3-209ENST00000477461 RANP62826 216 aaKnown RBP2.54□□□□□ -2
UBR3-209ENST00000477461 PDE6HQ13956 83 aa2.54□□□□□ -2
UBR3-209ENST00000477461 ZNF726P1Q15940 193 aa2.54□□□□□ -2
UBR3-209ENST00000477461 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa2.54□□□□□ -2
UBR3-209ENST00000477461 SSX7Q7RTT5 188 aa2.54□□□□□ -2
UBR3-209ENST00000477461 TMEM61Q8N0U2 210 aa2.54□□□□□ -2
UBR3-209ENST00000477461 WFDC9Q8NEX5 89 aa2.54□□□□□ -2
UBR3-209ENST00000477461 CMTM2Q8TAZ6 248 aa2.54□□□□□ -2
UBR3-209ENST00000477461 FXYD5Q96DB9 178 aa2.54□□□□□ -2
UBR3-209ENST00000477461 FAM167A-AS1Q96KT0 104 aa2.54□□□□□ -2
UBR3-209ENST00000477461 NKX6-2Q9C056 277 aaPredicted RBP2.54□□□□□ -2
UBR3-209ENST00000477461 MS4A6AQ9H2W1 248 aa2.54□□□□□ -2
UBR3-209ENST00000477461 MANBALQ9NQG1 85 aa2.54□□□□□ -2
UBR3-209ENST00000477461 GNG13Q9P2W3 67 aa2.54□□□□□ -2
Retrieved 100 of 20,778 RNA–protein pairs in 84.3 ms