RNA–Protein interactions for RNA: ENST00000476664.1

LRCH3-215, Transcript of leucine rich repeats and calponin homology domain containing 3, humanhuman

TSL 3

Gene LRCH3, Length 227 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3-215ENST00000476664 VPS25Q9BRG1 176 aa4.29□□□□□ -1.72
LRCH3-215ENST00000476664 C16orf95Q9H693 158 aa4.29□□□□□ -1.72
LRCH3-215ENST00000476664 RPS10P5Q9NQ39 176 aa4.29□□□□□ -1.72
LRCH3-215ENST00000476664 FAT2Q9NYQ8 4349 aa4.29□□□□□ -1.72
LRCH3-215ENST00000476664 VPS13DQ5THJ4 4388 aa4.28□□□□□ -1.72
LRCH3-215ENST00000476664 A0A1B0GVG6 124 aa4.28□□□□□ -1.72
LRCH3-215ENST00000476664 TRDV1A0A1B0GX56 115 aa4.28□□□□□ -1.72
LRCH3-215ENST00000476664 GGT3PA6NGU5 568 aa4.28□□□□□ -1.72
LRCH3-215ENST00000476664 ATP6V1G2-DDX39BF2Z307 99 aa4.28□□□□□ -1.72
LRCH3-215ENST00000476664 H3BQ85 93 aa4.28□□□□□ -1.72
LRCH3-215ENST00000476664 GGCTO75223 188 aaKnown RBP4.28□□□□□ -1.72
LRCH3-215ENST00000476664 LY6G6CO95867 125 aa4.28□□□□□ -1.72
LRCH3-215ENST00000476664 NPYP01303 97 aa4.28□□□□□ -1.72
LRCH3-215ENST00000476664 IGHV3-53P01767 116 aa4.28□□□□□ -1.72
LRCH3-215ENST00000476664 TRGC2P03986 189 aa4.28□□□□□ -1.72
LRCH3-215ENST00000476664 COL8A2P25067 703 aa4.28□□□□□ -1.72
LRCH3-215ENST00000476664 S100A11P31949 105 aa4.28□□□□□ -1.72
LRCH3-215ENST00000476664 PLCXD2Q0VAA5 305 aa4.28□□□□□ -1.72
LRCH3-215ENST00000476664 NDUFA5Q16718 116 aa4.28□□□□□ -1.72
LRCH3-215ENST00000476664 DEFB112Q30KQ8 113 aa4.28□□□□□ -1.72
LRCH3-215ENST00000476664 BCL2L15Q5TBC7 163 aa4.28□□□□□ -1.72
LRCH3-215ENST00000476664 NCBP2-AS2Q69YL0 99 aa4.28□□□□□ -1.72
LRCH3-215ENST00000476664 CANT1Q8WVQ1 401 aa4.28□□□□□ -1.72
LRCH3-215ENST00000476664 C1orf54Q8WWF1 131 aa4.28□□□□□ -1.72
LRCH3-215ENST00000476664 SLAMF6Q96DU3 332 aa4.28□□□□□ -1.72
LRCH3-215ENST00000476664 TEX37Q96LM6 180 aa4.28□□□□□ -1.72
LRCH3-215ENST00000476664 TRAPPC2LQ9UL33 140 aa4.28□□□□□ -1.72
LRCH3-215ENST00000476664 IGHV3-73A0A0B4J1V6 119 aa4.27□□□□□ -1.73
LRCH3-215ENST00000476664 LOC100996750A0A140TA64 210 aa4.27□□□□□ -1.73
LRCH3-215ENST00000476664 C1orf196B1AJZ1 125 aa4.27□□□□□ -1.73
LRCH3-215ENST00000476664 C5orf58C9J3I9 102 aa4.27□□□□□ -1.73
LRCH3-215ENST00000476664 BUB1B-PAK6H3BSN5 160 aa4.27□□□□□ -1.73
LRCH3-215ENST00000476664 OVOL1O14753 267 aa4.27□□□□□ -1.73
LRCH3-215ENST00000476664 CDS2O95674 445 aa4.27□□□□□ -1.73
LRCH3-215ENST00000476664 UBBP0CG47 229 aa4.27□□□□□ -1.73
LRCH3-215ENST00000476664 MPC1LP0DKB6 136 aa4.27□□□□□ -1.73
LRCH3-215ENST00000476664 DSCR10P59022 87 aa4.27□□□□□ -1.73
LRCH3-215ENST00000476664 MORN2Q502X0 79 aa4.27□□□□□ -1.73
LRCH3-215ENST00000476664 ZNF767PQ75MW2 155 aa4.27□□□□□ -1.73
LRCH3-215ENST00000476664 PRR15Q8IV56 129 aa4.27□□□□□ -1.73
LRCH3-215ENST00000476664 OR8I2Q8N0Y5 310 aa4.27□□□□□ -1.73
LRCH3-215ENST00000476664 BORCS8Q96FH0 119 aa4.27□□□□□ -1.73
LRCH3-215ENST00000476664 SLC25A21Q9BQT8 299 aaPredicted RBP4.27□□□□□ -1.73
LRCH3-215ENST00000476664 KRTAP4-6Q9BYQ5 205 aa4.27□□□□□ -1.73
LRCH3-215ENST00000476664 OR2H1Q9GZK4 316 aa4.27□□□□□ -1.73
LRCH3-215ENST00000476664 YIPF3Q9GZM5 350 aa4.27□□□□□ -1.73
LRCH3-215ENST00000476664 PKD1P98161 4303 aa4.27□□□□□ -1.73
LRCH3-215ENST00000476664 MYCBP2O75592 4640 aa4.27□□□□□ -1.73
LRCH3-215ENST00000476664 DNAH2Q9P225 4427 aa4.27□□□□□ -1.73
LRCH3-215ENST00000476664 C7orf66A4D0T2 115 aa4.26□□□□□ -1.73
LRCH3-215ENST00000476664 TPST1O60507 370 aa4.26□□□□□ -1.73
LRCH3-215ENST00000476664 APOC1P02654 83 aa4.26□□□□□ -1.73
LRCH3-215ENST00000476664 IGKV3-11P04433 115 aa4.26□□□□□ -1.73
LRCH3-215ENST00000476664 SCTP09683 121 aa4.26□□□□□ -1.73
LRCH3-215ENST00000476664 EIF5AP63241 154 aaKnown RBP4.26□□□□□ -1.73
LRCH3-215ENST00000476664 LGALSLQ3ZCW2 172 aaPredicted RBP4.26□□□□□ -1.73
LRCH3-215ENST00000476664 TMEM69Q5SWH9 247 aa4.26□□□□□ -1.73
LRCH3-215ENST00000476664 ZNF705AQ6ZN79 300 aaPredicted RBP4.26□□□□□ -1.73
LRCH3-215ENST00000476664 C3orf62Q6ZUJ4 267 aa4.26□□□□□ -1.73
LRCH3-215ENST00000476664 IFT20Q8IY31 132 aa4.26□□□□□ -1.73
LRCH3-215ENST00000476664 SEC22CQ9BRL7 303 aa4.26□□□□□ -1.73
LRCH3-215ENST00000476664 KRTAP4-8Q9BYQ9 185 aa4.26□□□□□ -1.73
LRCH3-215ENST00000476664 POPDC3Q9HBV1 291 aa4.26□□□□□ -1.73
LRCH3-215ENST00000476664 HMCN2Q8NDA2 5059 aa4.26□□□□□ -1.73
LRCH3-215ENST00000476664 IGKV1D-37A0A075B6S9 117 aa4.25□□□□□ -1.73
LRCH3-215ENST00000476664 TRAV5A0A0B4J249 113 aa4.25□□□□□ -1.73
LRCH3-215ENST00000476664 ARRDC5A6NEK1 342 aa4.25□□□□□ -1.73
LRCH3-215ENST00000476664 MIF4GDA9UHW6 222 aaKnown RBP4.25□□□□□ -1.73
LRCH3-215ENST00000476664 OR1I1O60431 355 aa4.25□□□□□ -1.73
LRCH3-215ENST00000476664 C1QCP02747 245 aa4.25□□□□□ -1.73
LRCH3-215ENST00000476664 MUC1P15941 1255 aaPredicted RBP4.25□□□□□ -1.73
LRCH3-215ENST00000476664 HLA-DMBP28068 263 aa4.25□□□□□ -1.73
LRCH3-215ENST00000476664 MIAQ16674 131 aa4.25□□□□□ -1.73
LRCH3-215ENST00000476664 LINC01554Q52M75 96 aa4.25□□□□□ -1.73
LRCH3-215ENST00000476664 C1orf140Q5VVS0 124 aa4.25□□□□□ -1.73
LRCH3-215ENST00000476664 HRCT1Q6UXD1 115 aa4.25□□□□□ -1.73
LRCH3-215ENST00000476664 OR4C16Q8NGL9 310 aa4.25□□□□□ -1.73
LRCH3-215ENST00000476664 SMCR5Q8TEV8 140 aa4.25□□□□□ -1.73
LRCH3-215ENST00000476664 TTTY13Q9BZ97 58 aa4.25□□□□□ -1.73
LRCH3-215ENST00000476664 TMEM133Q9H2Q1 129 aa4.25□□□□□ -1.73
LRCH3-215ENST00000476664 CACYBPQ9HB71 228 aaKnown RBP4.25□□□□□ -1.73
LRCH3-215ENST00000476664 NUP214P35658 2090 aaPredicted RBP4.25□□□□□ -1.73
LRCH3-215ENST00000476664 A0A087X0T9 212 aa4.24□□□□□ -1.73
LRCH3-215ENST00000476664 LOC102725191A0A1B0GVB3 256 aa4.24□□□□□ -1.73
LRCH3-215ENST00000476664 C19orf71A6NCJ1 209 aa4.24□□□□□ -1.73
LRCH3-215ENST00000476664 ZNF98A6NK75 572 aa4.24□□□□□ -1.73
LRCH3-215ENST00000476664 SMIM24O75264 130 aa4.24□□□□□ -1.73
LRCH3-215ENST00000476664 IGHV3-7P01780 117 aa4.24□□□□□ -1.73
LRCH3-215ENST00000476664 BIKQ13323 160 aa4.24□□□□□ -1.73
LRCH3-215ENST00000476664 BRD3OSQ6XYD6 125 aa4.24□□□□□ -1.73
LRCH3-215ENST00000476664 OR8D4Q8NGM9 314 aa4.24□□□□□ -1.73
LRCH3-215ENST00000476664 CARD19Q96LW7 228 aa4.24□□□□□ -1.73
LRCH3-215ENST00000476664 YPEL2Q96QA6 119 aa4.24□□□□□ -1.73
LRCH3-215ENST00000476664 MIEN1Q9BRT3 115 aa4.24□□□□□ -1.73
LRCH3-215ENST00000476664 DYNLRB1Q9NP97 96 aa4.24□□□□□ -1.73
LRCH3-215ENST00000476664 S4R3C0 116 aa4.24□□□□□ -1.73
LRCH3-215ENST00000476664 RNF213Q63HN8 5207 aa4.23□□□□□ -1.73
LRCH3-215ENST00000476664 DNAH6Q9C0G6 4158 aa4.23□□□□□ -1.73
LRCH3-215ENST00000476664 DNAH17Q9UFH2 4485 aa4.23□□□□□ -1.73
LRCH3-215ENST00000476664 TMEM212A6NML5 194 aa4.23□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 265.7 ms