RNA–Protein interactions for RNA: ENST00000474381.1

HLA-B-252, Transcript of major histocompatibility complex, class I, B, humanhuman

Gene HLA-B, Length 1,139 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-B-252ENST00000474381 MRPL16Q9NX20 251 aaKnown RBP14.1□□□□□ -0.15
HLA-B-252ENST00000474381 PEX7O00628 323 aa14.09□□□□□ -0.15
HLA-B-252ENST00000474381 CCL18P55774 89 aa14.09□□□□□ -0.15
HLA-B-252ENST00000474381 PRNTQ86SH4 94 aa14.09□□□□□ -0.15
HLA-B-252ENST00000474381 MBD3L1Q8WWY6 194 aa14.09□□□□□ -0.15
HLA-B-252ENST00000474381 RASL10AQ92737 203 aa14.09□□□□□ -0.15
HLA-B-252ENST00000474381 SDF2L1Q9HCN8 221 aa14.09□□□□□ -0.15
HLA-B-252ENST00000474381 IGHV3-16A0A0C4DH30 117 aa14.08□□□□□ -0.16
HLA-B-252ENST00000474381 GCGP01275 180 aa14.08□□□□□ -0.16
HLA-B-252ENST00000474381 PFN1P07737 140 aaKnown RBP14.08□□□□□ -0.16
HLA-B-252ENST00000474381 SLAQ13239 276 aa14.08□□□□□ -0.16
HLA-B-252ENST00000474381 FAM213BQ8TBF2 198 aa14.08□□□□□ -0.16
HLA-B-252ENST00000474381 C8orf49Q96NF6 230 aa14.08□□□□□ -0.16
HLA-B-252ENST00000474381 A0A0J9YY99 117 aa14.07□□□□□ -0.16
HLA-B-252ENST00000474381 ZNF80P51504 273 aaPredicted RBP14.07□□□□□ -0.16
HLA-B-252ENST00000474381 SFT2D1Q8WV19 159 aa14.07□□□□□ -0.16
HLA-B-252ENST00000474381 LINC00479Q96M42 142 aa14.07□□□□□ -0.16
HLA-B-252ENST00000474381 GNRH2O43555 120 aa14.06□□□□□ -0.16
HLA-B-252ENST00000474381 TYMSP04818 313 aa14.06□□□□□ -0.16
HLA-B-252ENST00000474381 VSIG2Q96IQ7 327 aa14.06□□□□□ -0.16
HLA-B-252ENST00000474381 TRAV34A0A0B4J273 112 aa14.05□□□□□ -0.16
HLA-B-252ENST00000474381 M0R2P5 195 aa14.05□□□□□ -0.16
HLA-B-252ENST00000474381 C1QBP02746 253 aa14.05□□□□□ -0.16
HLA-B-252ENST00000474381 LGALSLQ3ZCW2 172 aaPredicted RBP14.05□□□□□ -0.16
HLA-B-252ENST00000474381 EIF5AL1Q6IS14 154 aaKnown RBP14.05□□□□□ -0.16
HLA-B-252ENST00000474381 Q6ZR54 194 aa14.05□□□□□ -0.16
HLA-B-252ENST00000474381 Q86TA4 180 aa14.05□□□□□ -0.16
HLA-B-252ENST00000474381 PRO0255Q9UI72 69 aa14.05□□□□□ -0.16
HLA-B-252ENST00000474381 H2AFB1P0C5Y9 115 aa14.04□□□□□ -0.16
HLA-B-252ENST00000474381 CST9LP1Q5W188 147 aa14.04□□□□□ -0.16
HLA-B-252ENST00000474381 ZNRF2Q8NHG8 242 aa14.04□□□□□ -0.16
HLA-B-252ENST00000474381 FMC1Q96HJ9 113 aa14.04□□□□□ -0.16
HLA-B-252ENST00000474381 C11orf21Q9P2W6 132 aa14.04□□□□□ -0.16
HLA-B-252ENST00000474381 ZFP30Q9Y2G7 519 aa14.04□□□□□ -0.16
HLA-B-252ENST00000474381 LINC00588Q9Y4M8 146 aa14.04□□□□□ -0.16
HLA-B-252ENST00000474381 DNAH10Q8IVF4 4471 aa14.03□□□□□ -0.16
HLA-B-252ENST00000474381 IGLV2-18A0A075B6J9 118 aa14.03□□□□□ -0.16
HLA-B-252ENST00000474381 TRBV6-1A0A0K0K1D8 114 aa14.03□□□□□ -0.16
HLA-B-252ENST00000474381 IGHV3-53P01767 116 aa14.03□□□□□ -0.16
HLA-B-252ENST00000474381 RAB5CP51148 216 aa14.03□□□□□ -0.16
HLA-B-252ENST00000474381 FHL2Q14192 279 aa14.03□□□□□ -0.16
HLA-B-252ENST00000474381 LINC00336Q6ZUF6 198 aa14.03□□□□□ -0.16
HLA-B-252ENST00000474381 COX8CQ7Z4L0 72 aa14.03□□□□□ -0.16
HLA-B-252ENST00000474381 FRAS1Q86XX4 4008 aa14.02□□□□□ -0.16
HLA-B-252ENST00000474381 M0R2N4 97 aa14.02□□□□□ -0.17
HLA-B-252ENST00000474381 PAX4O43316 350 aa14.02□□□□□ -0.17
HLA-B-252ENST00000474381 PAGE4O60829 102 aa14.02□□□□□ -0.17
HLA-B-252ENST00000474381 HHLA3Q9XRX5 114 aa14.02□□□□□ -0.17
HLA-B-252ENST00000474381 A0A096LPF7 62 aa14.01□□□□□ -0.17
HLA-B-252ENST00000474381 TRAV4A0A0B4J268 109 aa14.01□□□□□ -0.17
HLA-B-252ENST00000474381 FABP5P3A8MUU1 101 aa14.01□□□□□ -0.17
HLA-B-252ENST00000474381 CRYBA4P53673 196 aa14.01□□□□□ -0.17
HLA-B-252ENST00000474381 UBE2G1P62253 170 aa14.01□□□□□ -0.17
HLA-B-252ENST00000474381 TRGV4A0A0C4DH28 118 aa14□□□□□ -0.17
HLA-B-252ENST00000474381 AKAP14Q86UN6 197 aa14□□□□□ -0.17
HLA-B-252ENST00000474381 ZNF479Q96JC4 524 aa14□□□□□ -0.17
HLA-B-252ENST00000474381 UPK3BQ9BT76 320 aa14□□□□□ -0.17
HLA-B-252ENST00000474381 ICOSQ9Y6W8 199 aa14□□□□□ -0.17
HLA-B-252ENST00000474381 BIRC6Q9NR09 4857 aa13.99□□□□□ -0.17
HLA-B-252ENST00000474381 TRAV1-1A0A0B4J248 108 aa13.99□□□□□ -0.17
HLA-B-252ENST00000474381 ESRGQ1W209 222 aa13.99□□□□□ -0.17
HLA-B-252ENST00000474381 SLC51BQ86UW2 128 aa13.99□□□□□ -0.17
HLA-B-252ENST00000474381 OR4C5Q8NGB2 326 aa13.99□□□□□ -0.17
HLA-B-252ENST00000474381 PTH2Q96A98 100 aa13.99□□□□□ -0.17
HLA-B-252ENST00000474381 C9orf85Q96MD7 179 aa13.99□□□□□ -0.17
HLA-B-252ENST00000474381 MRPS16Q9Y3D3 137 aaKnown RBP13.99□□□□□ -0.17
HLA-B-252ENST00000474381 MUC4Q99102 2169 aa13.98□□□□□ -0.17
HLA-B-252ENST00000474381 A0A1B0GV50 99 aa13.98□□□□□ -0.17
HLA-B-252ENST00000474381 LTAP01374 205 aa13.98□□□□□ -0.17
HLA-B-252ENST00000474381 S100A9P06702 114 aaKnown RBP13.98□□□□□ -0.17
HLA-B-252ENST00000474381 SFTA3P0C7M3 94 aa13.98□□□□□ -0.17
HLA-B-252ENST00000474381 ZNF876PQ49A33 203 aa13.98□□□□□ -0.17
HLA-B-252ENST00000474381 IGKV3D-20A0A0C4DH25 116 aa13.97□□□□□ -0.17
HLA-B-252ENST00000474381 NBDYA0A0U1RRE5 68 aa13.97□□□□□ -0.17
HLA-B-252ENST00000474381 TEX46H3BTG2 121 aa13.97□□□□□ -0.17
HLA-B-252ENST00000474381 CIDEAO60543 219 aa13.97□□□□□ -0.17
HLA-B-252ENST00000474381 AKR1C3P42330 323 aa13.97□□□□□ -0.17
HLA-B-252ENST00000474381 SULT1A2P50226 295 aa13.97□□□□□ -0.17
HLA-B-252ENST00000474381 MRPL23Q16540 153 aaKnown RBP13.97□□□□□ -0.17
HLA-B-252ENST00000474381 SOHLH1Q5JUK2 328 aa13.97□□□□□ -0.17
HLA-B-252ENST00000474381 ZC2HC1AQ96GY0 325 aa13.97□□□□□ -0.17
HLA-B-252ENST00000474381 NACAE9PAV3 2078 aa13.97□□□□□ -0.17
HLA-B-252ENST00000474381 RTL8CO15255 209 aa13.96□□□□□ -0.17
HLA-B-252ENST00000474381 ORM1P02763 201 aa13.96□□□□□ -0.17
HLA-B-252ENST00000474381 RNASE3P12724 160 aaKnown RBP13.96□□□□□ -0.17
HLA-B-252ENST00000474381 FAM162BQ5T6X4 162 aa13.96□□□□□ -0.17
HLA-B-252ENST00000474381 Q9H8V8 135 aa13.96□□□□□ -0.17
HLA-B-252ENST00000474381 MANBALQ9NQG1 85 aa13.96□□□□□ -0.17
HLA-B-252ENST00000474381 hCG_2014768A0A024R1R8 64 aa13.95□□□□□ -0.18
HLA-B-252ENST00000474381 C9JCJ5 164 aa13.95□□□□□ -0.18
HLA-B-252ENST00000474381 CRIP1P50238 77 aa13.95□□□□□ -0.18
HLA-B-252ENST00000474381 PIK3CD-AS1Q5SR53 167 aa13.95□□□□□ -0.18
HLA-B-252ENST00000474381 C1orf134Q5TEV5 83 aa13.95□□□□□ -0.18
HLA-B-252ENST00000474381 SCO2A0A1W2PP80 73 aa13.94□□□□□ -0.18
HLA-B-252ENST00000474381 B4DEV8 164 aa13.94□□□□□ -0.18
HLA-B-252ENST00000474381 S100A4P26447 101 aaKnown RBP13.94□□□□□ -0.18
HLA-B-252ENST00000474381 ASIPP42127 132 aa13.94□□□□□ -0.18
HLA-B-252ENST00000474381 ZNF674Q2M3X9 581 aa13.94□□□□□ -0.18
HLA-B-252ENST00000474381 TTC32Q5I0X7 151 aa13.94□□□□□ -0.18
HLA-B-252ENST00000474381 DNLZQ5SXM8 178 aa13.94□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 83.2 ms