RNA–Protein interactions for RNA: ENST00000471167.1

PRPF40A-206, Transcript of pre-mRNA processing factor 40 homolog A, humanhuman

TSL 2

Gene PRPF40A, Length 333 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40A-206ENST00000471167 IGHV1-18A0A0C4DH31 117 aa2.71□□□□□ -1.98
PRPF40A-206ENST00000471167 C16orf90A8MZG2 172 aa2.71□□□□□ -1.98
PRPF40A-206ENST00000471167 F8W1H4 67 aa2.71□□□□□ -1.98
PRPF40A-206ENST00000471167 UBL3O95164 117 aa2.71□□□□□ -1.98
PRPF40A-206ENST00000471167 APOC3P02656 99 aa2.71□□□□□ -1.98
PRPF40A-206ENST00000471167 GYPAP02724 150 aa2.71□□□□□ -1.98
PRPF40A-206ENST00000471167 SLC25A6P12236 298 aa2.71□□□□□ -1.98
PRPF40A-206ENST00000471167 EIF4EBP1Q13541 118 aaPredicted RBP2.71□□□□□ -1.98
PRPF40A-206ENST00000471167 TDRG1Q3Y452 100 aa2.71□□□□□ -1.98
PRPF40A-206ENST00000471167 ST20-AS1Q8NBB2 130 aa2.71□□□□□ -1.98
PRPF40A-206ENST00000471167 PMCHL2Q9BQD1 86 aa2.71□□□□□ -1.98
PRPF40A-206ENST00000471167 REG4Q9BYZ8 158 aa2.71□□□□□ -1.98
PRPF40A-206ENST00000471167 C14orf132Q9NPU4 83 aa2.71□□□□□ -1.98
PRPF40A-206ENST00000471167 UQCR10Q9UDW1 63 aa2.71□□□□□ -1.98
PRPF40A-206ENST00000471167 ROBO1Q9Y6N7 1651 aa2.71□□□□□ -1.98
PRPF40A-206ENST00000471167 CCDC88BA6NC98 1476 aa2.71□□□□□ -1.98
PRPF40A-206ENST00000471167 MCM3APO60318 1980 aa2.7□□□□□ -1.98
PRPF40A-206ENST00000471167 PSME4Q14997 1843 aa2.7□□□□□ -1.98
PRPF40A-206ENST00000471167 CLIP1P30622 1438 aa2.7□□□□□ -1.98
PRPF40A-206ENST00000471167 C10orf71Q711Q0 1435 aa2.7□□□□□ -1.98
PRPF40A-206ENST00000471167 SCN1AP35498 2009 aa2.7□□□□□ -1.98
PRPF40A-206ENST00000471167 C5orf67F2Z3F1 127 aa2.7□□□□□ -1.98
PRPF40A-206ENST00000471167 RPL26P61254 145 aaKnown RBP2.7□□□□□ -1.98
PRPF40A-206ENST00000471167 SLC25A26Q70HW3 274 aa2.7□□□□□ -1.98
PRPF40A-206ENST00000471167 FAM19A2Q8N3H0 131 aa2.7□□□□□ -1.98
PRPF40A-206ENST00000471167 Q8NAQ8 132 aa2.7□□□□□ -1.98
PRPF40A-206ENST00000471167 KLF14Q8TD94 323 aaPredicted RBP2.7□□□□□ -1.98
PRPF40A-206ENST00000471167 CXCL16Q9H2A7 254 aa2.7□□□□□ -1.98
PRPF40A-206ENST00000471167 TNRC6AQ8NDV7 1962 aaKnown RBP2.7□□□□□ -1.98
PRPF40A-206ENST00000471167 PXDNLA1KZ92 1463 aa2.7□□□□□ -1.98
PRPF40A-206ENST00000471167 CHD3Q12873 2000 aaKnown RBP2.69□□□□□ -1.98
PRPF40A-206ENST00000471167 CASKIN1Q8WXD9 1431 aa2.69□□□□□ -1.98
PRPF40A-206ENST00000471167 PLXNA3P51805 1871 aa2.69□□□□□ -1.98
PRPF40A-206ENST00000471167 WDR90Q96KV7 1748 aa2.69□□□□□ -1.98
PRPF40A-206ENST00000471167 A0A1B0GU33 70 aa2.69□□□□□ -1.98
PRPF40A-206ENST00000471167 SFT2D2O95562 160 aa2.69□□□□□ -1.98
PRPF40A-206ENST00000471167 CISD3P0C7P0 127 aa2.69□□□□□ -1.98
PRPF40A-206ENST00000471167 SSR2P43308 183 aa2.69□□□□□ -1.98
PRPF40A-206ENST00000471167 RBM3P98179 157 aaKnown RBP2.69□□□□□ -1.98
PRPF40A-206ENST00000471167 DEFA5Q01523 94 aa2.69□□□□□ -1.98
PRPF40A-206ENST00000471167 S100A7L2Q5SY68 101 aa2.69□□□□□ -1.98
PRPF40A-206ENST00000471167 SPANXN1Q5VSR9 72 aa2.69□□□□□ -1.98
PRPF40A-206ENST00000471167 LYPD6Q86Y78 171 aa2.69□□□□□ -1.98
PRPF40A-206ENST00000471167 DYNLRB2Q8TF09 96 aa2.69□□□□□ -1.98
PRPF40A-206ENST00000471167 MUCL1Q96DR8 90 aa2.69□□□□□ -1.98
PRPF40A-206ENST00000471167 OR8B2Q96RD0 313 aa2.69□□□□□ -1.98
PRPF40A-206ENST00000471167 SMCO4Q9NRQ5 59 aa2.69□□□□□ -1.98
PRPF40A-206ENST00000471167 PARP14Q460N5 1801 aa2.69□□□□□ -1.98
PRPF40A-206ENST00000471167 CABIN1Q9Y6J0 2220 aa2.69□□□□□ -1.98
PRPF40A-206ENST00000471167 KIDINS220Q9ULH0 1771 aa2.69□□□□□ -1.98
PRPF40A-206ENST00000471167 IGLV4-69A0A075B6H9 119 aa2.68□□□□□ -1.98
PRPF40A-206ENST00000471167 PIGBOS1A0A0B4J2F0 54 aa2.68□□□□□ -1.98
PRPF40A-206ENST00000471167 IGLC7A0M8Q6 106 aa2.68□□□□□ -1.98
PRPF40A-206ENST00000471167 PDCD5O14737 125 aa2.68□□□□□ -1.98
PRPF40A-206ENST00000471167 Q5BKY6 102 aa2.68□□□□□ -1.98
PRPF40A-206ENST00000471167 SPANXN5Q5MJ07 72 aa2.68□□□□□ -1.98
PRPF40A-206ENST00000471167 CASC2Q6XLA1 102 aa2.68□□□□□ -1.98
PRPF40A-206ENST00000471167 LINC00269Q8N2A0 174 aa2.68□□□□□ -1.98
PRPF40A-206ENST00000471167 C15orf53Q8NAA6 179 aa2.68□□□□□ -1.98
PRPF40A-206ENST00000471167 S100A16Q96FQ6 103 aaKnown RBP2.68□□□□□ -1.98
PRPF40A-206ENST00000471167 POLA1P09884 1462 aaPredicted RBP2.68□□□□□ -1.98
PRPF40A-206ENST00000471167 MYLKQ15746 1914 aa2.68□□□□□ -1.98
PRPF40A-206ENST00000471167 KIF20BQ96Q89 1820 aa2.68□□□□□ -1.98
PRPF40A-206ENST00000471167 LRRIQ1Q96JM4 1722 aa2.68□□□□□ -1.98
PRPF40A-206ENST00000471167 ADGRB3O60242 1522 aa2.68□□□□□ -1.98
PRPF40A-206ENST00000471167 SCAPERQ9BY12 1400 aa2.68□□□□□ -1.98
PRPF40A-206ENST00000471167 USP54Q70EL1 1684 aa2.67□□□□□ -1.98
PRPF40A-206ENST00000471167 ADAMTS12P58397 1594 aa2.67□□□□□ -1.98
PRPF40A-206ENST00000471167 hADV29S1A0JD25 119 aa2.67□□□□□ -1.98
PRPF40A-206ENST00000471167 IGKCP01834 107 aa2.67□□□□□ -1.98
PRPF40A-206ENST00000471167 ADCYAP1P18509 176 aa2.67□□□□□ -1.98
PRPF40A-206ENST00000471167 CBLN1P23435 193 aa2.67□□□□□ -1.98
PRPF40A-206ENST00000471167 FAUP35544 74 aaKnown RBP2.67□□□□□ -1.98
PRPF40A-206ENST00000471167 ARPINQ7Z6K5 226 aa2.67□□□□□ -1.98
PRPF40A-206ENST00000471167 TSLPQ969D9 159 aa2.67□□□□□ -1.98
PRPF40A-206ENST00000471167 TMEM141Q96I45 108 aa2.67□□□□□ -1.98
PRPF40A-206ENST00000471167 C20orf166-AS1Q96NR2 134 aa2.67□□□□□ -1.98
PRPF40A-206ENST00000471167 C20orf78Q9BR46 151 aa2.67□□□□□ -1.98
PRPF40A-206ENST00000471167 NDUFA12Q9UI09 145 aa2.67□□□□□ -1.98
PRPF40A-206ENST00000471167 LCTP09848 1927 aa2.67□□□□□ -1.98
PRPF40A-206ENST00000471167 MARF1Q9Y4F3 1742 aaKnown RBP2.67□□□□□ -1.98
PRPF40A-206ENST00000471167 SMARCA4P51532 1647 aa2.67□□□□□ -1.98
PRPF40A-206ENST00000471167 SBF2Q86WG5 1849 aa2.66□□□□□ -1.98
PRPF40A-206ENST00000471167 IGHV3-64A0A075B6Q5 118 aa2.66□□□□□ -1.98
PRPF40A-206ENST00000471167 ATOX1O00244 68 aa2.66□□□□□ -1.98
PRPF40A-206ENST00000471167 BAALC-AS2P0C853 105 aa2.66□□□□□ -1.98
PRPF40A-206ENST00000471167 POLR2JP52435 117 aaKnown RBP2.66□□□□□ -1.98
PRPF40A-206ENST00000471167 DSCR4P56555 118 aaPredicted RBP2.66□□□□□ -1.98
PRPF40A-206ENST00000471167 MOBPQ13875 183 aa2.66□□□□□ -1.98
PRPF40A-206ENST00000471167 ZNF345Q14585 488 aa2.66□□□□□ -1.98
PRPF40A-206ENST00000471167 KRTAP25-1Q3LHN0 102 aa2.66□□□□□ -1.98
PRPF40A-206ENST00000471167 TMEM136Q6ZRR5 245 aa2.66□□□□□ -1.98
PRPF40A-206ENST00000471167 LINC00299Q6ZSB3 139 aa2.66□□□□□ -1.98
PRPF40A-206ENST00000471167 ZNF826PQ6ZT77 177 aa2.66□□□□□ -1.98
PRPF40A-206ENST00000471167 COMMD6Q7Z4G1 85 aa2.66□□□□□ -1.98
PRPF40A-206ENST00000471167 HMGN2P46Q86SG4 172 aa2.66□□□□□ -1.98
PRPF40A-206ENST00000471167 THADAQ6YHU6 1953 aa2.65□□□□□ -1.98
PRPF40A-206ENST00000471167 DOCK1Q14185 1865 aa2.65□□□□□ -1.98
PRPF40A-206ENST00000471167 A0A0J9YX75 114 aa2.65□□□□□ -1.99
PRPF40A-206ENST00000471167 TRBV7-7A0A0K0K1E9 115 aa2.65□□□□□ -1.99
Retrieved 100 of 20,778 RNA–protein pairs in 118.7 ms