RNA–Protein interactions for RNA: ENST00000470339.1

COL4A5-203, Transcript of collagen type IV alpha 5 chain, humanhuman

TSL 3

Gene COL4A5, Length 782 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A5-203ENST00000470339 NUP35Q8NFH5 326 aa11.12□□□□□ -0.63
COL4A5-203ENST00000470339 GTSF1Q8WW33 167 aa11.12□□□□□ -0.63
COL4A5-203ENST00000470339 KCNS1Q96KK3 526 aa11.12□□□□□ -0.63
COL4A5-203ENST00000470339 FAM210BQ96KR6 192 aa11.12□□□□□ -0.63
COL4A5-203ENST00000470339 TGIF2-C20orf24A0A0A6YYL0 155 aa11.11□□□□□ -0.63
COL4A5-203ENST00000470339 DNLZQ5SXM8 178 aa11.11□□□□□ -0.63
COL4A5-203ENST00000470339 TRAV12-2A0A075B6T6 113 aa11.1□□□□□ -0.63
COL4A5-203ENST00000470339 F2Z2F3 143 aa11.1□□□□□ -0.63
COL4A5-203ENST00000470339 IGLC6P0CF74 106 aa11.1□□□□□ -0.63
COL4A5-203ENST00000470339 GZMBP10144 247 aa11.1□□□□□ -0.63
COL4A5-203ENST00000470339 RAB5AP20339 215 aa11.1□□□□□ -0.63
COL4A5-203ENST00000470339 TCL1AP56279 114 aa11.1□□□□□ -0.63
COL4A5-203ENST00000470339 COX19Q49B96 90 aa11.1□□□□□ -0.63
COL4A5-203ENST00000470339 OXLD1Q5BKU9 147 aa11.1□□□□□ -0.63
COL4A5-203ENST00000470339 RASL11AQ6T310 242 aa11.1□□□□□ -0.63
COL4A5-203ENST00000470339 FAM159AQ6UWV7 190 aa11.1□□□□□ -0.63
COL4A5-203ENST00000470339 Q6ZQT7 251 aa11.1□□□□□ -0.63
COL4A5-203ENST00000470339 ATP5L2Q7Z4Y8 100 aa11.1□□□□□ -0.63
COL4A5-203ENST00000470339 DEFB125Q8N687 156 aa11.1□□□□□ -0.63
COL4A5-203ENST00000470339 C1QTNF4Q9BXJ3 329 aa11.1□□□□□ -0.63
COL4A5-203ENST00000470339 TMSB15BA0A087X1C1 80 aa11.09□□□□□ -0.63
COL4A5-203ENST00000470339 INSP01308 110 aa11.09□□□□□ -0.63
COL4A5-203ENST00000470339 FXYD7P58549 80 aa11.09□□□□□ -0.63
COL4A5-203ENST00000470339 ANXA2RQ3ZCQ2 193 aa11.09□□□□□ -0.63
COL4A5-203ENST00000470339 WDR73Q6P4I2 378 aa11.09□□□□□ -0.63
COL4A5-203ENST00000470339 TMEM256Q8N2U0 113 aa11.09□□□□□ -0.63
COL4A5-203ENST00000470339 LINC00467Q9BRT7 94 aa11.09□□□□□ -0.63
COL4A5-203ENST00000470339 WFDC10AQ9H1F0 79 aa11.09□□□□□ -0.63
COL4A5-203ENST00000470339 IGHV1OR15-1A0A075B7D0 117 aa11.08□□□□□ -0.64
COL4A5-203ENST00000470339 A0A1B0GW15 77 aa11.08□□□□□ -0.64
COL4A5-203ENST00000470339 MED14OSP0DP75 135 aa11.08□□□□□ -0.64
COL4A5-203ENST00000470339 CTRLP40313 264 aa11.08□□□□□ -0.64
COL4A5-203ENST00000470339 SREK1IP1Q8N9Q2 155 aaPredicted RBP11.08□□□□□ -0.64
COL4A5-203ENST00000470339 FER1L6-AS1Q8NA97 138 aa11.08□□□□□ -0.64
COL4A5-203ENST00000470339 PGLYRP4Q96LB8 373 aa11.08□□□□□ -0.64
COL4A5-203ENST00000470339 SSBP4Q9BWG4 385 aaPredicted RBP11.08□□□□□ -0.64
COL4A5-203ENST00000470339 SRD5A3Q9H8P0 318 aa11.08□□□□□ -0.64
COL4A5-203ENST00000470339 NAGKQ9UJ70 344 aa11.08□□□□□ -0.64
COL4A5-203ENST00000470339 A0A1B0GUT8 65 aa11.07□□□□□ -0.64
COL4A5-203ENST00000470339 GRIFINA4D1Z8 144 aa11.07□□□□□ -0.64
COL4A5-203ENST00000470339 OR5AL1P0C617 328 aa11.07□□□□□ -0.64
COL4A5-203ENST00000470339 MUC21Q5SSG8 566 aa11.07□□□□□ -0.64
COL4A5-203ENST00000470339 BORCS7Q96B45 105 aa11.07□□□□□ -0.64
COL4A5-203ENST00000470339 CNFNQ9BYD5 112 aa11.07□□□□□ -0.64
COL4A5-203ENST00000470339 CMYA5Q8N3K9 4069 aa11.07□□□□□ -0.64
COL4A5-203ENST00000470339 SNAI2O43623 268 aa11.06□□□□□ -0.64
COL4A5-203ENST00000470339 GIG44P09565 113 aaPredicted RBP11.06□□□□□ -0.64
COL4A5-203ENST00000470339 ASIPP42127 132 aa11.06□□□□□ -0.64
COL4A5-203ENST00000470339 RIGQ13278 110 aa11.06□□□□□ -0.64
COL4A5-203ENST00000470339 SAMD5Q5TGI4 173 aa11.06□□□□□ -0.64
COL4A5-203ENST00000470339 LYZL1Q6UWQ5 148 aa11.06□□□□□ -0.64
COL4A5-203ENST00000470339 GNB1LQ9BYB4 327 aa11.06□□□□□ -0.64
COL4A5-203ENST00000470339 CSTL1Q9H114 145 aa11.06□□□□□ -0.64
COL4A5-203ENST00000470339 XCL2Q9UBD3 114 aa11.06□□□□□ -0.64
COL4A5-203ENST00000470339 TRGV11A0A075B6L2 103 aa11.05□□□□□ -0.64
COL4A5-203ENST00000470339 LOC102724200A0A096LPH7 203 aaPredicted RBP11.05□□□□□ -0.64
COL4A5-203ENST00000470339 KIR2DL5BA0A0G2JN68 375 aa11.05□□□□□ -0.64
COL4A5-203ENST00000470339 KIR2DL5BA0A0G2JPC4 375 aa11.05□□□□□ -0.64
COL4A5-203ENST00000470339 A0A1B0GXF2 115 aa11.05□□□□□ -0.64
COL4A5-203ENST00000470339 GNRH2O43555 120 aa11.05□□□□□ -0.64
COL4A5-203ENST00000470339 S100A8P05109 93 aa11.05□□□□□ -0.64
COL4A5-203ENST00000470339 RBMY1A1P0DJD3 496 aaKnown RBP11.05□□□□□ -0.64
COL4A5-203ENST00000470339 RBMY1CP0DJD4 496 aa11.05□□□□□ -0.64
COL4A5-203ENST00000470339 RPL35AP18077 110 aaKnown RBP11.05□□□□□ -0.64
COL4A5-203ENST00000470339 RPS10P46783 165 aaKnown RBP11.05□□□□□ -0.64
COL4A5-203ENST00000470339 KRTAP10-11P60412 298 aa11.05□□□□□ -0.64
COL4A5-203ENST00000470339 RBMY1FQ15415 496 aaKnown RBP11.05□□□□□ -0.64
COL4A5-203ENST00000470339 KIR2DL5AQ8N109 375 aa11.05□□□□□ -0.64
COL4A5-203ENST00000470339 KIR2DL5BQ8NHK3 375 aa11.05□□□□□ -0.64
COL4A5-203ENST00000470339 IGHV4-4A0A075B6R2 117 aa11.04□□□□□ -0.64
COL4A5-203ENST00000470339 SPINK4O60575 86 aa11.04□□□□□ -0.64
COL4A5-203ENST00000470339 MT-ND6P03923 174 aa11.04□□□□□ -0.64
COL4A5-203ENST00000470339 S100A4P26447 101 aaKnown RBP11.04□□□□□ -0.64
COL4A5-203ENST00000470339 CACNG7P62955 275 aa11.04□□□□□ -0.64
COL4A5-203ENST00000470339 HBBP68871 147 aa11.04□□□□□ -0.64
COL4A5-203ENST00000470339 MRPL54Q6P161 138 aaKnown RBP11.04□□□□□ -0.64
COL4A5-203ENST00000470339 LINC01587Q99440 93 aa11.04□□□□□ -0.64
COL4A5-203ENST00000470339 TPPP3Q9BW30 176 aa11.04□□□□□ -0.64
COL4A5-203ENST00000470339 SCRT2Q9NQ03 307 aa11.04□□□□□ -0.64
COL4A5-203ENST00000470339 TP53TG3Q9ULZ0 132 aa11.04□□□□□ -0.64
COL4A5-203ENST00000470339 GOLT1BQ9Y3E0 138 aa11.04□□□□□ -0.64
COL4A5-203ENST00000470339 FBN3Q75N90 2809 aa11.04□□□□□ -0.64
COL4A5-203ENST00000470339 IGHV3-16A0A0C4DH30 117 aa11.03□□□□□ -0.64
COL4A5-203ENST00000470339 A8MZ25 164 aa11.03□□□□□ -0.64
COL4A5-203ENST00000470339 ARMS2P0C7Q2 107 aa11.03□□□□□ -0.64
COL4A5-203ENST00000470339 APOC4P55056 127 aa11.03□□□□□ -0.64
COL4A5-203ENST00000470339 C1orf158Q8N1D5 194 aa11.03□□□□□ -0.64
COL4A5-203ENST00000470339 GATD1Q8NB37 220 aa11.03□□□□□ -0.64
COL4A5-203ENST00000470339 CSNK1G2-AS1Q8NCQ2 148 aa11.03□□□□□ -0.64
COL4A5-203ENST00000470339 CBY3A6NI87 242 aa11.02□□□□□ -0.65
COL4A5-203ENST00000470339 G3V4G9 280 aa11.02□□□□□ -0.65
COL4A5-203ENST00000470339 RNASE3P12724 160 aaKnown RBP11.02□□□□□ -0.65
COL4A5-203ENST00000470339 TMEM208Q9BTX3 173 aa11.02□□□□□ -0.65
COL4A5-203ENST00000470339 H3BVH4 76 aa11.01□□□□□ -0.65
COL4A5-203ENST00000470339 UBE2CO00762 179 aa11.01□□□□□ -0.65
COL4A5-203ENST00000470339 HLA-DQA1P01909 254 aa11.01□□□□□ -0.65
COL4A5-203ENST00000470339 NTF3P20783 257 aa11.01□□□□□ -0.65
COL4A5-203ENST00000470339 TMEM136Q6ZRR5 245 aa11.01□□□□□ -0.65
COL4A5-203ENST00000470339 C9orf85Q96MD7 179 aa11.01□□□□□ -0.65
COL4A5-203ENST00000470339 PHLDA3Q9Y5J5 127 aa11.01□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 87.6 ms