RNA–Protein interactions for RNA: ENST00000465877.1

COL5A1-206, Transcript of collagen type V alpha 1 chain, humanhuman

TSL 3

Gene COL5A1, Length 583 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A1-206ENST00000465877 MRPL16Q9NX20 251 aaKnown RBP9.06□□□□□ -0.96
COL5A1-206ENST00000465877 FAT2Q9NYQ8 4349 aa9.05□□□□□ -0.96
COL5A1-206ENST00000465877 TRGV2A0A075B6R0 118 aa9.05□□□□□ -0.96
COL5A1-206ENST00000465877 TRAV34A0A0B4J273 112 aa9.05□□□□□ -0.96
COL5A1-206ENST00000465877 TYMSP04818 313 aa9.05□□□□□ -0.96
COL5A1-206ENST00000465877 HOXA5P20719 270 aa9.05□□□□□ -0.96
COL5A1-206ENST00000465877 ZNF80P51504 273 aaPredicted RBP9.05□□□□□ -0.96
COL5A1-206ENST00000465877 SMUG1Q53HV7 270 aa9.05□□□□□ -0.96
COL5A1-206ENST00000465877 UBE2DNLQ8IWF7 75 aa9.05□□□□□ -0.96
COL5A1-206ENST00000465877 SFT2D1Q8WV19 159 aa9.05□□□□□ -0.96
COL5A1-206ENST00000465877 MBD3L1Q8WWY6 194 aa9.05□□□□□ -0.96
COL5A1-206ENST00000465877 LINC00479Q96M42 142 aa9.05□□□□□ -0.96
COL5A1-206ENST00000465877 TCEAL7Q9BRU2 100 aa9.05□□□□□ -0.96
COL5A1-206ENST00000465877 PFN1P07737 140 aaKnown RBP9.04□□□□□ -0.96
COL5A1-206ENST00000465877 LGALS9BQ3B8N2 356 aa9.04□□□□□ -0.96
COL5A1-206ENST00000465877 CST9LP1Q5W188 147 aa9.04□□□□□ -0.96
COL5A1-206ENST00000465877 KCNS1Q96KK3 526 aa9.04□□□□□ -0.96
COL5A1-206ENST00000465877 SDF2L1Q9HCN8 221 aa9.04□□□□□ -0.96
COL5A1-206ENST00000465877 MDFICQ9P1T7 246 aa9.04□□□□□ -0.96
COL5A1-206ENST00000465877 TRAV26-1A0A087WT03 109 aa9.03□□□□□ -0.96
COL5A1-206ENST00000465877 PAGE4O60829 102 aa9.03□□□□□ -0.96
COL5A1-206ENST00000465877 NUDT3O95989 172 aa9.03□□□□□ -0.96
COL5A1-206ENST00000465877 H2AFB1P0C5Y9 115 aa9.03□□□□□ -0.96
COL5A1-206ENST00000465877 UBE2G1P62253 170 aa9.03□□□□□ -0.96
COL5A1-206ENST00000465877 OR5I1Q13606 314 aa9.03□□□□□ -0.96
COL5A1-206ENST00000465877 SAPCD1Q5SSQ6 148 aa9.03□□□□□ -0.96
COL5A1-206ENST00000465877 EIF5AL1Q6IS14 154 aaKnown RBP9.03□□□□□ -0.96
COL5A1-206ENST00000465877 SLC51BQ86UW2 128 aa9.03□□□□□ -0.96
COL5A1-206ENST00000465877 C9orf62Q8N4C0 152 aa9.03□□□□□ -0.96
COL5A1-206ENST00000465877 POM121L12Q8N7R1 296 aa9.03□□□□□ -0.96
COL5A1-206ENST00000465877 C11orf21Q9P2W6 132 aa9.03□□□□□ -0.96
COL5A1-206ENST00000465877 IGHV3-16A0A0C4DH30 117 aa9.02□□□□□ -0.97
COL5A1-206ENST00000465877 A0A1B0GVG6 124 aa9.02□□□□□ -0.97
COL5A1-206ENST00000465877 AKR1C3P42330 323 aa9.02□□□□□ -0.97
COL5A1-206ENST00000465877 RAB5CP51148 216 aa9.02□□□□□ -0.97
COL5A1-206ENST00000465877 FMC1Q96HJ9 113 aa9.02□□□□□ -0.97
COL5A1-206ENST00000465877 SPXQ9BT56 116 aa9.02□□□□□ -0.97
COL5A1-206ENST00000465877 DNAH17Q9UFH2 4485 aa9.01□□□□□ -0.97
COL5A1-206ENST00000465877 A0A0J9YY99 117 aa9.01□□□□□ -0.97
COL5A1-206ENST00000465877 GNRH2O43555 120 aa9.01□□□□□ -0.97
COL5A1-206ENST00000465877 IGHV3-53P01767 116 aa9.01□□□□□ -0.97
COL5A1-206ENST00000465877 SULT1A2P50226 295 aa9.01□□□□□ -0.97
COL5A1-206ENST00000465877 RNF212Q495C1 297 aa9.01□□□□□ -0.97
COL5A1-206ENST00000465877 MANBALQ9NQG1 85 aa9.01□□□□□ -0.97
COL5A1-206ENST00000465877 BIRC6Q9NR09 4857 aa9.01□□□□□ -0.97
COL5A1-206ENST00000465877 SCO2A0A1W2PP80 73 aa9□□□□□ -0.97
COL5A1-206ENST00000465877 ZC2HC1AQ96GY0 325 aa9□□□□□ -0.97
COL5A1-206ENST00000465877 TRAV1-1A0A0B4J248 108 aa8.99□□□□□ -0.97
COL5A1-206ENST00000465877 TRBV6-1A0A0K0K1D8 114 aa8.99□□□□□ -0.97
COL5A1-206ENST00000465877 H3BNG1 76 aa8.99□□□□□ -0.97
COL5A1-206ENST00000465877 TEX46H3BTG2 121 aa8.99□□□□□ -0.97
COL5A1-206ENST00000465877 M0R2P5 195 aa8.99□□□□□ -0.97
COL5A1-206ENST00000465877 LTAP01374 205 aa8.99□□□□□ -0.97
COL5A1-206ENST00000465877 RASL10AQ92737 203 aa8.99□□□□□ -0.97
COL5A1-206ENST00000465877 ZFP30Q9Y2G7 519 aa8.99□□□□□ -0.97
COL5A1-206ENST00000465877 SFTA3P0C7M3 94 aa8.98□□□□□ -0.97
COL5A1-206ENST00000465877 COX8CQ7Z4L0 72 aa8.98□□□□□ -0.97
COL5A1-206ENST00000465877 VSIG2Q96IQ7 327 aa8.98□□□□□ -0.97
COL5A1-206ENST00000465877 C9orf85Q96MD7 179 aa8.98□□□□□ -0.97
COL5A1-206ENST00000465877 GNG13Q9P2W3 67 aa8.98□□□□□ -0.97
COL5A1-206ENST00000465877 IGLV2-18A0A075B6J9 118 aa8.97□□□□□ -0.97
COL5A1-206ENST00000465877 TRAV4A0A0B4J268 109 aa8.97□□□□□ -0.97
COL5A1-206ENST00000465877 IGKV3D-20A0A0C4DH25 116 aa8.97□□□□□ -0.97
COL5A1-206ENST00000465877 SH2D1AO60880 128 aa8.97□□□□□ -0.97
COL5A1-206ENST00000465877 RNASE3P12724 160 aaKnown RBP8.97□□□□□ -0.97
COL5A1-206ENST00000465877 CCL18P55774 89 aa8.97□□□□□ -0.97
COL5A1-206ENST00000465877 FAM3BP58499 235 aaPredicted RBP8.97□□□□□ -0.97
COL5A1-206ENST00000465877 CCL20P78556 96 aa8.97□□□□□ -0.97
COL5A1-206ENST00000465877 FAM162BQ5T6X4 162 aa8.97□□□□□ -0.97
COL5A1-206ENST00000465877 NHLRC2Q8NBF2 726 aa8.97□□□□□ -0.97
COL5A1-206ENST00000465877 ZNF479Q96JC4 524 aa8.97□□□□□ -0.97
COL5A1-206ENST00000465877 TRGV4A0A0C4DH28 118 aa8.96□□□□□ -0.98
COL5A1-206ENST00000465877 FABP5P3A8MUU1 101 aa8.96□□□□□ -0.98
COL5A1-206ENST00000465877 NKX2-5P52952 324 aaPredicted RBP8.96□□□□□ -0.98
COL5A1-206ENST00000465877 FHL2Q14192 279 aa8.96□□□□□ -0.98
COL5A1-206ENST00000465877 C11orf52Q96A22 123 aa8.96□□□□□ -0.98
COL5A1-206ENST00000465877 PRO0255Q9UI72 69 aa8.96□□□□□ -0.98
COL5A1-206ENST00000465877 LINC00588Q9Y4M8 146 aa8.96□□□□□ -0.98
COL5A1-206ENST00000465877 PKD1P98161 4303 aa8.95□□□□□ -0.98
COL5A1-206ENST00000465877 A0A096LPF7 62 aa8.95□□□□□ -0.98
COL5A1-206ENST00000465877 B4DEV8 164 aa8.95□□□□□ -0.98
COL5A1-206ENST00000465877 C9JCJ5 164 aa8.95□□□□□ -0.98
COL5A1-206ENST00000465877 M0R036 132 aa8.95□□□□□ -0.98
COL5A1-206ENST00000465877 M0R2N4 97 aa8.95□□□□□ -0.98
COL5A1-206ENST00000465877 PAX4O43316 350 aa8.95□□□□□ -0.98
COL5A1-206ENST00000465877 IFNA1P01562 189 aa8.95□□□□□ -0.98
COL5A1-206ENST00000465877 ORM1P02763 201 aa8.95□□□□□ -0.98
COL5A1-206ENST00000465877 S100A9P06702 114 aaKnown RBP8.95□□□□□ -0.98
COL5A1-206ENST00000465877 ASIPP42127 132 aa8.95□□□□□ -0.98
COL5A1-206ENST00000465877 CRIP1P50238 77 aa8.95□□□□□ -0.98
COL5A1-206ENST00000465877 CRYBA4P53673 196 aa8.95□□□□□ -0.98
COL5A1-206ENST00000465877 ZNF674Q2M3X9 581 aa8.95□□□□□ -0.98
COL5A1-206ENST00000465877 ZNF876PQ49A33 203 aa8.95□□□□□ -0.98
COL5A1-206ENST00000465877 ZNF506Q5JVG8 444 aa8.95□□□□□ -0.98
COL5A1-206ENST00000465877 OR4C5Q8NGB2 326 aa8.95□□□□□ -0.98
COL5A1-206ENST00000465877 TXNDC17Q9BRA2 123 aa8.95□□□□□ -0.98
COL5A1-206ENST00000465877 ICOSQ9Y6W8 199 aa8.95□□□□□ -0.98
COL5A1-206ENST00000465877 PKHD1P08F94 4074 aa8.94□□□□□ -0.98
COL5A1-206ENST00000465877 KRBOX1C9JBD0 128 aa8.94□□□□□ -0.98
COL5A1-206ENST00000465877 H3BVH4 76 aa8.94□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 91.4 ms