RNA–Protein interactions for RNA: ENST00000464616.6

GARNL3-213, Transcript of GTPase activating Rap/RanGAP domain like 3, humanhuman

TSL 5

Gene GARNL3, Length 549 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GARNL3-213ENST00000464616 ARAP1Q96P48 1450 aa0.62□□□□□ -2.31
GARNL3-213ENST00000464616 ANKRD30AQ9BXX3 1397 aa0.62□□□□□ -2.31
GARNL3-213ENST00000464616 MCRIP1C9JLW8 97 aa0.62□□□□□ -2.31
GARNL3-213ENST00000464616 KDELR1P24390 212 aa0.62□□□□□ -2.31
GARNL3-213ENST00000464616 SPINT3P49223 89 aa0.62□□□□□ -2.31
GARNL3-213ENST00000464616 OR8B8Q15620 311 aa0.62□□□□□ -2.31
GARNL3-213ENST00000464616 LYPD5Q6UWN5 251 aa0.62□□□□□ -2.31
GARNL3-213ENST00000464616 Q86TA4 180 aa0.62□□□□□ -2.31
GARNL3-213ENST00000464616 MMGT1Q8N4V1 131 aa0.62□□□□□ -2.31
GARNL3-213ENST00000464616 PLAC4Q8WY50 150 aa0.62□□□□□ -2.31
GARNL3-213ENST00000464616 LIMD2Q9BT23 127 aa0.62□□□□□ -2.31
GARNL3-213ENST00000464616 BATF3Q9NR55 127 aa0.62□□□□□ -2.31
GARNL3-213ENST00000464616 TRPM7Q96QT4 1865 aa0.62□□□□□ -2.31
GARNL3-213ENST00000464616 TET1Q8NFU7 2136 aa0.62□□□□□ -2.31
GARNL3-213ENST00000464616 ASCC3Q8N3C0 2202 aaKnown RBP0.61□□□□□ -2.31
GARNL3-213ENST00000464616 TENM3Q9P273 2699 aa0.61□□□□□ -2.31
GARNL3-213ENST00000464616 TNFSF15O95150 251 aa0.61□□□□□ -2.31
GARNL3-213ENST00000464616 OR2H2O95918 312 aa0.61□□□□□ -2.31
GARNL3-213ENST00000464616 TCRAP04437 139 aa0.61□□□□□ -2.31
GARNL3-213ENST00000464616 PRB4P10163 310 aaPredicted RBP0.61□□□□□ -2.31
GARNL3-213ENST00000464616 HLA-DRB4P13762 266 aa0.61□□□□□ -2.31
GARNL3-213ENST00000464616 ADCYAP1P18509 176 aa0.61□□□□□ -2.31
GARNL3-213ENST00000464616 POLR2JP52435 117 aaKnown RBP0.61□□□□□ -2.31
GARNL3-213ENST00000464616 MORN2Q502X0 79 aa0.61□□□□□ -2.31
GARNL3-213ENST00000464616 CSAG1Q6PB30 78 aa0.61□□□□□ -2.31
GARNL3-213ENST00000464616 TMEM91Q6ZNR0 172 aa0.61□□□□□ -2.31
GARNL3-213ENST00000464616 NDUFA11Q86Y39 141 aa0.61□□□□□ -2.31
GARNL3-213ENST00000464616 HLA-DRB4X5D2U9 266 aa0.61□□□□□ -2.31
GARNL3-213ENST00000464616 TRBV10-1A0A0K0K1A3 114 aa0.6□□□□□ -2.31
GARNL3-213ENST00000464616 TEX49A0A1B0GTD5 131 aa0.6□□□□□ -2.31
GARNL3-213ENST00000464616 C9JAW5 83 aa0.6□□□□□ -2.31
GARNL3-213ENST00000464616 TMEM244Q5VVB8 128 aa0.6□□□□□ -2.31
GARNL3-213ENST00000464616 SLC35B3Q9H1N7 401 aa0.6□□□□□ -2.31
GARNL3-213ENST00000464616 GSKIPQ9P0R6 139 aa0.6□□□□□ -2.31
GARNL3-213ENST00000464616 HIGD1AQ9Y241 93 aa0.6□□□□□ -2.31
GARNL3-213ENST00000464616 PTPRGP23470 1445 aa0.59□□□□□ -2.31
GARNL3-213ENST00000464616 SPINK7P58062 85 aa0.59□□□□□ -2.31
GARNL3-213ENST00000464616 ANP32BQ92688 251 aaKnown RBP0.59□□□□□ -2.31
GARNL3-213ENST00000464616 SAR1AQ9NR31 198 aa0.59□□□□□ -2.31
GARNL3-213ENST00000464616 COA4Q9NYJ1 87 aa0.59□□□□□ -2.31
GARNL3-213ENST00000464616 COMMD3Q9UBI1 195 aa0.59□□□□□ -2.31
GARNL3-213ENST00000464616 MUC4Q99102 2169 aa0.59□□□□□ -2.32
GARNL3-213ENST00000464616 BCORL1Q5H9F3 1711 aa0.58□□□□□ -2.32
GARNL3-213ENST00000464616 KIDINS220Q9ULH0 1771 aa0.58□□□□□ -2.32
GARNL3-213ENST00000464616 AHNAK2Q8IVF2 5795 aa0.58□□□□□ -2.32
GARNL3-213ENST00000464616 CCDC179H3BU77 68 aa0.58□□□□□ -2.32
GARNL3-213ENST00000464616 J3QR89 54 aa0.58□□□□□ -2.32
GARNL3-213ENST00000464616 CDC42EP2O14613 210 aa0.58□□□□□ -2.32
GARNL3-213ENST00000464616 CCKP06307 115 aa0.58□□□□□ -2.32
GARNL3-213ENST00000464616 AKR1D1P51857 326 aa0.58□□□□□ -2.32
GARNL3-213ENST00000464616 KLKP1Q107X0 134 aa0.58□□□□□ -2.32
GARNL3-213ENST00000464616 FXYD3Q14802 87 aa0.58□□□□□ -2.32
GARNL3-213ENST00000464616 GLYATL3Q5SZD4 288 aa0.58□□□□□ -2.32
GARNL3-213ENST00000464616 C6orf52Q5T4I8 152 aa0.58□□□□□ -2.32
GARNL3-213ENST00000464616 ATP11AUNQ6ZP68 121 aa0.58□□□□□ -2.32
GARNL3-213ENST00000464616 SLC25A26Q70HW3 274 aa0.58□□□□□ -2.32
GARNL3-213ENST00000464616 C5orf56Q8N8D9 126 aa0.58□□□□□ -2.32
GARNL3-213ENST00000464616 ATP6V0E2Q8NHE4 81 aa0.58□□□□□ -2.32
GARNL3-213ENST00000464616 PLAC8Q9NZF1 115 aa0.58□□□□□ -2.32
GARNL3-213ENST00000464616 ERG28Q9UKR5 140 aa0.58□□□□□ -2.32
GARNL3-213ENST00000464616 VIRMAQ69YN4 1812 aaKnown RBP0.58□□□□□ -2.32
GARNL3-213ENST00000464616 KCPQ6ZWJ8 1503 aa0.58□□□□□ -2.32
GARNL3-213ENST00000464616 SPTBP11277 2137 aa0.58□□□□□ -2.32
GARNL3-213ENST00000464616 KDM5CP41229 1560 aa0.57□□□□□ -2.32
GARNL3-213ENST00000464616 TRAV12-2A0A075B6T6 113 aa0.57□□□□□ -2.32
GARNL3-213ENST00000464616 A0A0D9SG42 100 aa0.57□□□□□ -2.32
GARNL3-213ENST00000464616 CD3DP04234 171 aa0.57□□□□□ -2.32
GARNL3-213ENST00000464616 IL7P13232 177 aa0.57□□□□□ -2.32
GARNL3-213ENST00000464616 NCS1P62166 190 aa0.57□□□□□ -2.32
GARNL3-213ENST00000464616 ZNF56Q15929 161 aa0.57□□□□□ -2.32
GARNL3-213ENST00000464616 LZICQ8WZA0 190 aa0.57□□□□□ -2.32
GARNL3-213ENST00000464616 BANF2Q9H503 90 aa0.57□□□□□ -2.32
GARNL3-213ENST00000464616 CCDC171Q6TFL3 1326 aa0.57□□□□□ -2.32
GARNL3-213ENST00000464616 AFDNP55196 1824 aaKnown RBP0.57□□□□□ -2.32
GARNL3-213ENST00000464616 WDR97A6NE52 1622 aa0.56□□□□□ -2.32
GARNL3-213ENST00000464616 ARHGAP31Q2M1Z3 1444 aa0.56□□□□□ -2.32
GARNL3-213ENST00000464616 ANKRD17O75179 2603 aaKnown RBP0.56□□□□□ -2.32
GARNL3-213ENST00000464616 CTTNBP2Q8WZ74 1663 aa0.56□□□□□ -2.32
GARNL3-213ENST00000464616 FBN2P35556 2912 aa0.56□□□□□ -2.32
GARNL3-213ENST00000464616 MT-ND4LP03901 98 aa0.56□□□□□ -2.32
GARNL3-213ENST00000464616 KRTAP19-3Q7Z4W3 81 aa0.56□□□□□ -2.32
GARNL3-213ENST00000464616 DYNLRB2Q8TF09 96 aa0.56□□□□□ -2.32
GARNL3-213ENST00000464616 LINC00208Q96KT6 92 aa0.56□□□□□ -2.32
GARNL3-213ENST00000464616 TMEM14BQ9NUH8 114 aa0.56□□□□□ -2.32
GARNL3-213ENST00000464616 BET1LQ9NYM9 111 aa0.56□□□□□ -2.32
GARNL3-213ENST00000464616 NOP16Q9Y3C1 178 aaKnown RBP0.56□□□□□ -2.32
GARNL3-213ENST00000464616 DNAJC15Q9Y5T4 150 aa0.56□□□□□ -2.32
GARNL3-213ENST00000464616 HELZP42694 1942 aaKnown RBP0.56□□□□□ -2.32
GARNL3-213ENST00000464616 OVOS2A0A0J9YW53 1432 aa0.55□□□□□ -2.32
GARNL3-213ENST00000464616 OVOS2Q6IE36 1432 aa0.55□□□□□ -2.32
GARNL3-213ENST00000464616 NBDYA0A0U1RRE5 68 aa0.55□□□□□ -2.32
GARNL3-213ENST00000464616 LOC101927531A0A1B0GV80 90 aa0.55□□□□□ -2.32
GARNL3-213ENST00000464616 FXYD1O00168 92 aa0.55□□□□□ -2.32
GARNL3-213ENST00000464616 RPL37P61927 97 aaKnown RBP0.55□□□□□ -2.32
GARNL3-213ENST00000464616 BLMP54132 1417 aaPredicted RBP0.55□□□□□ -2.32
GARNL3-213ENST00000464616 NOTCH1P46531 2555 aa0.54□□□□□ -2.32
GARNL3-213ENST00000464616 J3QLW9 94 aa0.54□□□□□ -2.32
GARNL3-213ENST00000464616 M0R2P5 195 aa0.54□□□□□ -2.32
GARNL3-213ENST00000464616 NCR2O95944 276 aa0.54□□□□□ -2.32
GARNL3-213ENST00000464616 IGKCP01834 107 aa0.54□□□□□ -2.32
Retrieved 100 of 20,778 RNA–protein pairs in 100.6 ms