RNA–Protein interactions for RNA: ENST00000462715.1

TRAPPC3-205, Transcript of trafficking protein particle complex 3, humanhuman

TSL 2

Gene TRAPPC3, Length 2,428 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC3-205ENST00000462715 SNCGO76070 127 aa8.96□□□□□ -0.97
TRAPPC3-205ENST00000462715 PRDX2P32119 198 aa8.96□□□□□ -0.97
TRAPPC3-205ENST00000462715 FAM53AQ6NSI3 398 aaPredicted RBP8.96□□□□□ -0.97
TRAPPC3-205ENST00000462715 LINC00305Q7Z4B0 112 aa8.96□□□□□ -0.97
TRAPPC3-205ENST00000462715 TMEM14CQ9P0S9 112 aa8.96□□□□□ -0.97
TRAPPC3-205ENST00000462715 F8P00451 2351 aa8.96□□□□□ -0.97
TRAPPC3-205ENST00000462715 IGHV3-43A0A0B4J1X8 118 aa8.96□□□□□ -0.98
TRAPPC3-205ENST00000462715 MYMXA0A1B0GTQ4 84 aa8.96□□□□□ -0.98
TRAPPC3-205ENST00000462715 WIPF1O43516 503 aa8.96□□□□□ -0.98
TRAPPC3-205ENST00000462715 MSMBP08118 114 aa8.96□□□□□ -0.98
TRAPPC3-205ENST00000462715 IGHV3-43DP0DP04 118 aa8.96□□□□□ -0.98
TRAPPC3-205ENST00000462715 SRSF12Q8WXF0 261 aaKnown RBP8.96□□□□□ -0.98
TRAPPC3-205ENST00000462715 GAFA1Q96PS6 74 aa8.96□□□□□ -0.98
TRAPPC3-205ENST00000462715 Q9H3A6 140 aa8.96□□□□□ -0.98
TRAPPC3-205ENST00000462715 CTSZQ9UBR2 303 aa8.96□□□□□ -0.98
TRAPPC3-205ENST00000462715 FAM216BQ8N7L0 139 aa8.95□□□□□ -0.98
TRAPPC3-205ENST00000462715 FBXL15Q9H469 300 aa8.95□□□□□ -0.98
TRAPPC3-205ENST00000462715 MDFICQ9P1T7 246 aa8.95□□□□□ -0.98
TRAPPC3-205ENST00000462715 VPREB3Q9UKI3 123 aa8.95□□□□□ -0.98
TRAPPC3-205ENST00000462715 NCBP2LA6PVI3 153 aaKnown RBP8.95□□□□□ -0.98
TRAPPC3-205ENST00000462715 TGFAP01135 160 aa8.95□□□□□ -0.98
TRAPPC3-205ENST00000462715 GP9P14770 177 aa8.95□□□□□ -0.98
TRAPPC3-205ENST00000462715 PLNP26678 52 aa8.95□□□□□ -0.98
TRAPPC3-205ENST00000462715 LOXL3P58215 753 aa8.95□□□□□ -0.98
TRAPPC3-205ENST00000462715 MRPL51Q4U2R6 128 aaKnown RBP8.95□□□□□ -0.98
TRAPPC3-205ENST00000462715 ZC2HC1BQ5TFG8 222 aa8.95□□□□□ -0.98
TRAPPC3-205ENST00000462715 CD177Q8N6Q3 437 aa8.95□□□□□ -0.98
TRAPPC3-205ENST00000462715 OR10J6PQ8NGY7 276 aa8.95□□□□□ -0.98
TRAPPC3-205ENST00000462715 IGLV2-11P01706 119 aa8.94□□□□□ -0.98
TRAPPC3-205ENST00000462715 RPL39P5Q59GN2 51 aa8.94□□□□□ -0.98
TRAPPC3-205ENST00000462715 GLMPQ8WWB7 406 aa8.94□□□□□ -0.98
TRAPPC3-205ENST00000462715 TRGV9Q99603 122 aa8.94□□□□□ -0.98
TRAPPC3-205ENST00000462715 IGKV1D-37A0A075B6S9 117 aa8.94□□□□□ -0.98
TRAPPC3-205ENST00000462715 LOC389332A0A1B0GUA5 103 aa8.94□□□□□ -0.98
TRAPPC3-205ENST00000462715 UBE2D1P51668 147 aa8.94□□□□□ -0.98
TRAPPC3-205ENST00000462715 DIAPH2-AS1Q14236 149 aa8.94□□□□□ -0.98
TRAPPC3-205ENST00000462715 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP8.94□□□□□ -0.981e-7■■■■□ 20.6
TRAPPC3-205ENST00000462715 PPP1R27Q86WC6 154 aa8.94□□□□□ -0.98
TRAPPC3-205ENST00000462715 LYPD1Q8N2G4 141 aa8.94□□□□□ -0.98
TRAPPC3-205ENST00000462715 OR4C13Q8NGP0 309 aa8.94□□□□□ -0.98
TRAPPC3-205ENST00000462715 NDUFA4L2Q9NRX3 87 aa8.94□□□□□ -0.98
TRAPPC3-205ENST00000462715 ABCA2Q9BZC7 2435 aa8.93□□□□□ -0.98
TRAPPC3-205ENST00000462715 A0A1W2PPI3 338 aa8.93□□□□□ -0.98
TRAPPC3-205ENST00000462715 CCDC179H3BU77 68 aa8.93□□□□□ -0.98
TRAPPC3-205ENST00000462715 LY6G6DO95868 133 aa8.93□□□□□ -0.98
TRAPPC3-205ENST00000462715 NPYP01303 97 aa8.93□□□□□ -0.98
TRAPPC3-205ENST00000462715 TFF1P04155 84 aa8.93□□□□□ -0.98
TRAPPC3-205ENST00000462715 DUX4L9Q6RFH8 374 aaPredicted RBP8.93□□□□□ -0.98
TRAPPC3-205ENST00000462715 ZNRF1Q8ND25 227 aa8.93□□□□□ -0.98
TRAPPC3-205ENST00000462715 OR11H6Q8NGC7 330 aa8.93□□□□□ -0.98
TRAPPC3-205ENST00000462715 PTH2Q96A98 100 aa8.93□□□□□ -0.98
TRAPPC3-205ENST00000462715 TLN2Q9Y4G6 2542 aa8.93□□□□□ -0.98
TRAPPC3-205ENST00000462715 ABCA1O95477 2261 aa8.93□□□□□ -0.98
TRAPPC3-205ENST00000462715 PRSS1P07477 247 aa8.93□□□□□ -0.98
TRAPPC3-205ENST00000462715 ZFP36P26651 326 aaKnown RBP8.93□□□□□ -0.98
TRAPPC3-205ENST00000462715 SRSF2Q01130 221 aaKnown RBP8.93□□□□□ -0.98
TRAPPC3-205ENST00000462715 KRTAP1-1Q07627 177 aa8.93□□□□□ -0.98
TRAPPC3-205ENST00000462715 COX8CQ7Z4L0 72 aa8.93□□□□□ -0.98
TRAPPC3-205ENST00000462715 RFESDQ8TAC1 157 aa8.93□□□□□ -0.98
TRAPPC3-205ENST00000462715 SMR3AQ99954 134 aa8.93□□□□□ -0.98
TRAPPC3-205ENST00000462715 RASL11BQ9BPW5 248 aa8.93□□□□□ -0.98
TRAPPC3-205ENST00000462715 MED13LQ71F56 2210 aa8.93□□□□□ -0.98
TRAPPC3-205ENST00000462715 CSPG4Q6UVK1 2322 aa8.93□□□□□ -0.98
TRAPPC3-205ENST00000462715 ENSAO43768 121 aaKnown RBP8.92□□□□□ -0.98
TRAPPC3-205ENST00000462715 PVRIGQ6DKI7 326 aa8.92□□□□□ -0.98
TRAPPC3-205ENST00000462715 GTSCR1Q86UQ5 136 aa8.92□□□□□ -0.98
TRAPPC3-205ENST00000462715 METRNQ9UJH8 293 aa8.92□□□□□ -0.98
TRAPPC3-205ENST00000462715 TRAV12-1A0A0B4J245 112 aa8.92□□□□□ -0.98
TRAPPC3-205ENST00000462715 SCGB1C2P0DMR2 95 aa8.92□□□□□ -0.98
TRAPPC3-205ENST00000462715 PPIFP30405 207 aaKnown RBP8.92□□□□□ -0.98
TRAPPC3-205ENST00000462715 CKS2P33552 79 aa8.92□□□□□ -0.98
TRAPPC3-205ENST00000462715 PRR31Q5SQ13 230 aa8.92□□□□□ -0.98
TRAPPC3-205ENST00000462715 DNAJC30Q96LL9 226 aa8.92□□□□□ -0.98
TRAPPC3-205ENST00000462715 MALRD1Q5VYJ5 2156 aa8.92□□□□□ -0.98
TRAPPC3-205ENST00000462715 J3QLI3 93 aa8.91□□□□□ -0.98
TRAPPC3-205ENST00000462715 PSMB2P49721 201 aa8.91□□□□□ -0.98
TRAPPC3-205ENST00000462715 MAPKAPK5-AS1Q8N8E1 139 aa8.91□□□□□ -0.98
TRAPPC3-205ENST00000462715 AJUBAQ96IF1 538 aa8.91□□□□□ -0.98
TRAPPC3-205ENST00000462715 RPUSD1Q9UJJ7 312 aaKnown RBP8.91□□□□□ -0.98
TRAPPC3-205ENST00000462715 TMEM213A2RRL7 107 aa8.91□□□□□ -0.98
TRAPPC3-205ENST00000462715 CGB3P0DN86 165 aa8.91□□□□□ -0.98
TRAPPC3-205ENST00000462715 CGB7P0DN87 165 aa8.91□□□□□ -0.98
TRAPPC3-205ENST00000462715 ZNF134P52741 427 aa8.91□□□□□ -0.98
TRAPPC3-205ENST00000462715 TMEM78Q5T7P6 136 aa8.91□□□□□ -0.98
TRAPPC3-205ENST00000462715 PRNTQ86SH4 94 aa8.91□□□□□ -0.98
TRAPPC3-205ENST00000462715 DCTN5Q9BTE1 182 aa8.91□□□□□ -0.98
TRAPPC3-205ENST00000462715 MYOD1P15172 320 aa8.9□□□□□ -0.98
TRAPPC3-205ENST00000462715 LEPP41159 167 aa8.9□□□□□ -0.98
TRAPPC3-205ENST00000462715 NPIPB3Q92617 1050 aa8.9□□□□□ -0.98
TRAPPC3-205ENST00000462715 SAA2P0DJI9 122 aaPredicted RBP8.9□□□□□ -0.99
TRAPPC3-205ENST00000462715 MLANAQ16655 118 aa8.9□□□□□ -0.99
TRAPPC3-205ENST00000462715 AMN1Q8IY45 258 aa8.9□□□□□ -0.99
TRAPPC3-205ENST00000462715 SGK494Q96LW2 274 aa8.9□□□□□ -0.99
TRAPPC3-205ENST00000462715 HIVEP2P31629 2446 aa8.9□□□□□ -0.99
TRAPPC3-205ENST00000462715 MTORP42345 2549 aa8.89□□□□□ -0.99
TRAPPC3-205ENST00000462715 PRTN3P24158 256 aa8.89□□□□□ -0.99
TRAPPC3-205ENST00000462715 EDDM3AQ14507 147 aa8.89□□□□□ -0.99
TRAPPC3-205ENST00000462715 Q8N8P6 123 aa8.89□□□□□ -0.99
TRAPPC3-205ENST00000462715 LY6G5BQ8NDX9 201 aa8.89□□□□□ -0.99
TRAPPC3-205ENST00000462715 MYOZ3Q8TDC0 251 aa8.89□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 62.6 ms