RNA–Protein interactions for RNA: ENST00000456948.5

CBX3-204, Transcript of chromobox 3, humanhuman

TSL 5

Gene CBX3, Length 1,068 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX3-204ENST00000456948 TVP23CQ96ET8 276 aa16.26■□□□□ 0.19
CBX3-204ENST00000456948 ARL2-SNX15V9GYD0 113 aa16.26■□□□□ 0.19
CBX3-204ENST00000456948 VPS13DQ5THJ4 4388 aa16.26■□□□□ 0.19
CBX3-204ENST00000456948 PEX7O00628 323 aa16.25■□□□□ 0.19
CBX3-204ENST00000456948 GCGP01275 180 aa16.25■□□□□ 0.19
CBX3-204ENST00000456948 FHITP49789 147 aa16.25■□□□□ 0.19
CBX3-204ENST00000456948 LGALSLQ3ZCW2 172 aaPredicted RBP16.25■□□□□ 0.19
CBX3-204ENST00000456948 MBD3L1Q8WWY6 194 aa16.24■□□□□ 0.19
CBX3-204ENST00000456948 MRPL16Q9NX20 251 aaKnown RBP16.24■□□□□ 0.19
CBX3-204ENST00000456948 MDFICQ9P1T7 246 aa16.24■□□□□ 0.19
CBX3-204ENST00000456948 IGLV2-11P01706 119 aa16.23■□□□□ 0.19
CBX3-204ENST00000456948 PFN1P07737 140 aaKnown RBP16.23■□□□□ 0.19
CBX3-204ENST00000456948 H2AFB1P0C5Y9 115 aa16.23■□□□□ 0.19
CBX3-204ENST00000456948 A0A0J9YY99 117 aa16.22■□□□□ 0.19
CBX3-204ENST00000456948 TEX46H3BTG2 121 aa16.22■□□□□ 0.19
CBX3-204ENST00000456948 C1QBP02746 253 aa16.22■□□□□ 0.19
CBX3-204ENST00000456948 HOXA5P20719 270 aa16.22■□□□□ 0.19
CBX3-204ENST00000456948 RAB5CP51148 216 aa16.22■□□□□ 0.19
CBX3-204ENST00000456948 UBE2G1P62253 170 aa16.22■□□□□ 0.19
CBX3-204ENST00000456948 AKAP14Q86UN6 197 aa16.22■□□□□ 0.19
CBX3-204ENST00000456948 C8orf49Q96NF6 230 aa16.22■□□□□ 0.19
CBX3-204ENST00000456948 RASL10AQ92737 203 aa16.21■□□□□ 0.19
CBX3-204ENST00000456948 FMC1Q96HJ9 113 aa16.21■□□□□ 0.19
CBX3-204ENST00000456948 ZFP30Q9Y2G7 519 aa16.21■□□□□ 0.19
CBX3-204ENST00000456948 MUC4Q99102 2169 aa16.2■□□□□ 0.18
CBX3-204ENST00000456948 BIRC6Q9NR09 4857 aa16.2■□□□□ 0.18
CBX3-204ENST00000456948 TRAV34A0A0B4J273 112 aa16.2■□□□□ 0.18
CBX3-204ENST00000456948 M0R2P5 195 aa16.2■□□□□ 0.18
CBX3-204ENST00000456948 GNRH2O43555 120 aa16.2■□□□□ 0.18
CBX3-204ENST00000456948 LINC00479Q96M42 142 aa16.2■□□□□ 0.18
CBX3-204ENST00000456948 IGHV3-16A0A0C4DH30 117 aa16.19■□□□□ 0.18
CBX3-204ENST00000456948 FABP5P3A8MUU1 101 aa16.19■□□□□ 0.18
CBX3-204ENST00000456948 TYMSP04818 313 aa16.19■□□□□ 0.18
CBX3-204ENST00000456948 PRO0255Q9UI72 69 aa16.19■□□□□ 0.18
CBX3-204ENST00000456948 TRGV4A0A0C4DH28 118 aa16.18■□□□□ 0.18
CBX3-204ENST00000456948 PAX4O43316 350 aa16.18■□□□□ 0.18
CBX3-204ENST00000456948 PAGE4O60829 102 aa16.18■□□□□ 0.18
CBX3-204ENST00000456948 IGHV3-53P01767 116 aa16.18■□□□□ 0.18
CBX3-204ENST00000456948 S100A9P06702 114 aaKnown RBP16.18■□□□□ 0.18
CBX3-204ENST00000456948 HHLA3Q9XRX5 114 aa16.18■□□□□ 0.18
CBX3-204ENST00000456948 ZNF80P51504 273 aaPredicted RBP16.17■□□□□ 0.18
CBX3-204ENST00000456948 SLC51BQ86UW2 128 aa16.17■□□□□ 0.18
CBX3-204ENST00000456948 hCG_2014768A0A024R1R8 64 aa16.16■□□□□ 0.18
CBX3-204ENST00000456948 A0A1B0GV50 99 aa16.16■□□□□ 0.18
CBX3-204ENST00000456948 M0R2N4 97 aa16.16■□□□□ 0.18
CBX3-204ENST00000456948 AKR1C3P42330 323 aa16.16■□□□□ 0.18
CBX3-204ENST00000456948 Q86TA4 180 aa16.16■□□□□ 0.18
CBX3-204ENST00000456948 OR4C5Q8NGB2 326 aa16.16■□□□□ 0.18
CBX3-204ENST00000456948 IGLV2-18A0A075B6J9 118 aa16.15■□□□□ 0.18
CBX3-204ENST00000456948 SOHLH1Q5JUK2 328 aa16.15■□□□□ 0.18
CBX3-204ENST00000456948 DNAH6Q9C0G6 4158 aa16.15■□□□□ 0.18
CBX3-204ENST00000456948 TRAV4A0A0B4J268 109 aa16.14■□□□□ 0.17
CBX3-204ENST00000456948 TRBV6-1A0A0K0K1D8 114 aa16.14■□□□□ 0.17
CBX3-204ENST00000456948 S100A4P26447 101 aaKnown RBP16.14■□□□□ 0.17
CBX3-204ENST00000456948 LINC00336Q6ZUF6 198 aa16.14■□□□□ 0.17
CBX3-204ENST00000456948 MANBALQ9NQG1 85 aa16.14■□□□□ 0.17
CBX3-204ENST00000456948 ICOSQ9Y6W8 199 aa16.14■□□□□ 0.17
CBX3-204ENST00000456948 CIDEAO60543 219 aa16.13■□□□□ 0.17
CBX3-204ENST00000456948 ORM1P02763 201 aa16.13■□□□□ 0.17
CBX3-204ENST00000456948 PCNPQ8WW12 178 aaKnown RBP16.13■□□□□ 0.17
CBX3-204ENST00000456948 VSIG2Q96IQ7 327 aa16.13■□□□□ 0.17
CBX3-204ENST00000456948 LINC00588Q9Y4M8 146 aa16.13■□□□□ 0.17
CBX3-204ENST00000456948 FRAS1Q86XX4 4008 aa16.12■□□□□ 0.17
CBX3-204ENST00000456948 TRAV1-1A0A0B4J248 108 aa16.12■□□□□ 0.17
CBX3-204ENST00000456948 CRYBA4P53673 196 aa16.12■□□□□ 0.17
CBX3-204ENST00000456948 FHL2Q14192 279 aa16.12■□□□□ 0.17
CBX3-204ENST00000456948 MRPL23Q16540 153 aaKnown RBP16.12■□□□□ 0.17
CBX3-204ENST00000456948 ZNF876PQ49A33 203 aa16.12■□□□□ 0.17
CBX3-204ENST00000456948 FAM162BQ5T6X4 162 aa16.12■□□□□ 0.17
CBX3-204ENST00000456948 NACAE9PAV3 2078 aa16.12■□□□□ 0.17
CBX3-204ENST00000456948 C9JCJ5 164 aa16.11■□□□□ 0.17
CBX3-204ENST00000456948 SULT1A2P50226 295 aa16.11■□□□□ 0.17
CBX3-204ENST00000456948 COX8CQ7Z4L0 72 aa16.11■□□□□ 0.17
CBX3-204ENST00000456948 TXNDC17Q9BRA2 123 aa16.11■□□□□ 0.17
CBX3-204ENST00000456948 C11orf21Q9P2W6 132 aa16.11■□□□□ 0.17
CBX3-204ENST00000456948 A0A096LPF7 62 aa16.1■□□□□ 0.17
CBX3-204ENST00000456948 LTAP01374 205 aa16.1■□□□□ 0.17
CBX3-204ENST00000456948 ASIPP42127 132 aa16.1■□□□□ 0.17
CBX3-204ENST00000456948 ZNF479Q96JC4 524 aa16.1■□□□□ 0.17
CBX3-204ENST00000456948 B4DEV8 164 aa16.09■□□□□ 0.17
CBX3-204ENST00000456948 IFNA1P01562 189 aa16.09■□□□□ 0.17
CBX3-204ENST00000456948 SFTA3P0C7M3 94 aa16.09■□□□□ 0.17
CBX3-204ENST00000456948 ZNRF2Q8NHG8 242 aa16.09■□□□□ 0.17
CBX3-204ENST00000456948 PTH2Q96A98 100 aa16.09■□□□□ 0.17
CBX3-204ENST00000456948 GNG13Q9P2W3 67 aa16.09■□□□□ 0.17
CBX3-204ENST00000456948 ESRGQ1W209 222 aa16.08■□□□□ 0.16
CBX3-204ENST00000456948 Q6ZR54 194 aa16.08■□□□□ 0.16
CBX3-204ENST00000456948 ZC2HC1AQ96GY0 325 aa16.08■□□□□ 0.16
CBX3-204ENST00000456948 C9orf85Q96MD7 179 aa16.08■□□□□ 0.16
CBX3-204ENST00000456948 Q9H8V8 135 aa16.08■□□□□ 0.16
CBX3-204ENST00000456948 IGKV3D-20A0A0C4DH25 116 aa16.07■□□□□ 0.16
CBX3-204ENST00000456948 C1orf134Q5TEV5 83 aa16.07■□□□□ 0.16
CBX3-204ENST00000456948 NEGR1Q7Z3B1 354 aa16.07■□□□□ 0.16
CBX3-204ENST00000456948 UPK3BQ9BT76 320 aa16.07■□□□□ 0.16
CBX3-204ENST00000456948 MRPS16Q9Y3D3 137 aaKnown RBP16.07■□□□□ 0.16
CBX3-204ENST00000456948 NBDYA0A0U1RRE5 68 aa16.06■□□□□ 0.16
CBX3-204ENST00000456948 SH2D1AO60880 128 aa16.06■□□□□ 0.16
CBX3-204ENST00000456948 SRIP30626 198 aa16.06■□□□□ 0.16
CBX3-204ENST00000456948 TTC32Q5I0X7 151 aa16.06■□□□□ 0.16
CBX3-204ENST00000456948 BAGE2Q86Y30 109 aa16.06■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 187.4 ms