RNA–Protein interactions for RNA: ENST00000454591.6

ECHDC1-209, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 2 BASIC

Gene ECHDC1, Length 1,515 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-209ENST00000454591 SMIM2Q9BVW6 85 aa9.47□□□□□ -0.89
ECHDC1-209ENST00000454591 SPTBN1Q01082 2364 aaKnown RBP9.47□□□□□ -0.89
ECHDC1-209ENST00000454591 COL6A6A6NMZ7 2263 aa9.47□□□□□ -0.89
ECHDC1-209ENST00000454591 IGHV3OR16-10A0A075B7F0 116 aa9.46□□□□□ -0.89
ECHDC1-209ENST00000454591 IGHV4-30-2A0A087WSY4 118 aa9.46□□□□□ -0.89
ECHDC1-209ENST00000454591 B4DSR2 109 aa9.46□□□□□ -0.89
ECHDC1-209ENST00000454591 DPM2O94777 84 aa9.46□□□□□ -0.89
ECHDC1-209ENST00000454591 PPP1R17O96001 155 aa9.46□□□□□ -0.89
ECHDC1-209ENST00000454591 ASIPP42127 132 aa9.46□□□□□ -0.89
ECHDC1-209ENST00000454591 VAMP3Q15836 100 aa9.46□□□□□ -0.89
ECHDC1-209ENST00000454591 ODF3Q96PU9 254 aa9.46□□□□□ -0.89
ECHDC1-209ENST00000454591 DPH3P1Q9H4G8 78 aa9.46□□□□□ -0.89
ECHDC1-209ENST00000454591 DAZ1Q9NQZ3 744 aaKnown RBP9.46□□□□□ -0.89
ECHDC1-209ENST00000454591 LINC00527Q9UJ94 153 aa9.46□□□□□ -0.89
ECHDC1-209ENST00000454591 C7orf71A4D174 169 aa9.46□□□□□ -0.9
ECHDC1-209ENST00000454591 H3BVH4 76 aa9.46□□□□□ -0.9
ECHDC1-209ENST00000454591 ATP5J2P56134 94 aa9.46□□□□□ -0.9
ECHDC1-209ENST00000454591 MYOZ3Q8TDC0 251 aa9.46□□□□□ -0.9
ECHDC1-209ENST00000454591 CBY1Q9Y3M2 126 aa9.46□□□□□ -0.9
ECHDC1-209ENST00000454591 NBASA2RRP1 2371 aa9.45□□□□□ -0.9
ECHDC1-209ENST00000454591 A0A087WX48 190 aa9.45□□□□□ -0.9
ECHDC1-209ENST00000454591 LINC01549A6NIU2 74 aa9.45□□□□□ -0.9
ECHDC1-209ENST00000454591 KLLNB2CW77 178 aa9.45□□□□□ -0.9
ECHDC1-209ENST00000454591 PRSS1P07477 247 aa9.45□□□□□ -0.9
ECHDC1-209ENST00000454591 ORMDL2Q53FV1 153 aa9.45□□□□□ -0.9
ECHDC1-209ENST00000454591 OR4C5Q8NGB2 326 aa9.45□□□□□ -0.9
ECHDC1-209ENST00000454591 RHPN1-AS1Q9BWJ2 59 aa9.45□□□□□ -0.9
ECHDC1-209ENST00000454591 KLK15Q9H2R5 256 aa9.45□□□□□ -0.9
ECHDC1-209ENST00000454591 C9orf118A6NHY6 69 aa9.44□□□□□ -0.9
ECHDC1-209ENST00000454591 PF4V1P10720 104 aa9.44□□□□□ -0.9
ECHDC1-209ENST00000454591 Q6ZQT7 251 aa9.44□□□□□ -0.9
ECHDC1-209ENST00000454591 RASL10AQ92737 203 aa9.44□□□□□ -0.9
ECHDC1-209ENST00000454591 TOMM6Q96B49 74 aa9.44□□□□□ -0.9
ECHDC1-209ENST00000454591 C18orf15Q96N68 181 aa9.44□□□□□ -0.9
ECHDC1-209ENST00000454591 FOXC2Q99958 501 aa9.44□□□□□ -0.9
ECHDC1-209ENST00000454591 UFC1Q9Y3C8 167 aa9.44□□□□□ -0.9
ECHDC1-209ENST00000454591 MED13LQ71F56 2210 aa9.43□□□□□ -0.9
ECHDC1-209ENST00000454591 IGHV4OR15-8A0A075B7B6 117 aa9.43□□□□□ -0.9
ECHDC1-209ENST00000454591 A0A087WW49 117 aa9.43□□□□□ -0.9
ECHDC1-209ENST00000454591 TRAV8-6A0A0B4J262 113 aa9.43□□□□□ -0.9
ECHDC1-209ENST00000454591 LINC01619G3V211 115 aa9.43□□□□□ -0.9
ECHDC1-209ENST00000454591 J3QLI3 93 aa9.43□□□□□ -0.9
ECHDC1-209ENST00000454591 RNASE3P12724 160 aaKnown RBP9.43□□□□□ -0.9
ECHDC1-209ENST00000454591 PLNP26678 52 aa9.43□□□□□ -0.9
ECHDC1-209ENST00000454591 PSMB8P28062 276 aa9.43□□□□□ -0.9
ECHDC1-209ENST00000454591 BLCAPP62952 87 aa9.43□□□□□ -0.9
ECHDC1-209ENST00000454591 LY6EQ16553 131 aa9.43□□□□□ -0.9
ECHDC1-209ENST00000454591 TAL2Q16559 108 aa9.43□□□□□ -0.9
ECHDC1-209ENST00000454591 ANXA2RQ3ZCQ2 193 aa9.43□□□□□ -0.9
ECHDC1-209ENST00000454591 PCP2Q8IVA1 136 aa9.43□□□□□ -0.9
ECHDC1-209ENST00000454591 CACNA1BQ00975 2339 aa9.43□□□□□ -0.9
ECHDC1-209ENST00000454591 RNF223E7ERA6 249 aa9.42□□□□□ -0.9
ECHDC1-209ENST00000454591 ID1P41134 155 aa9.42□□□□□ -0.9
ECHDC1-209ENST00000454591 SUMO2P61956 95 aaKnown RBP9.42□□□□□ -0.9
ECHDC1-209ENST00000454591 UFSP1Q6NVU6 142 aa9.42□□□□□ -0.9
ECHDC1-209ENST00000454591 RNF152Q8N8N0 203 aa9.42□□□□□ -0.9
ECHDC1-209ENST00000454591 DCANP1Q8TF63 244 aa9.42□□□□□ -0.9
ECHDC1-209ENST00000454591 AP1S3Q96PC3 154 aa9.42□□□□□ -0.9
ECHDC1-209ENST00000454591 KIF25-AS1Q9Y6Z4 181 aa9.42□□□□□ -0.9
ECHDC1-209ENST00000454591 A0A096LNT2 108 aa9.41□□□□□ -0.9
ECHDC1-209ENST00000454591 IGKV2D-26A0A0A0MRZ7 120 aa9.41□□□□□ -0.9
ECHDC1-209ENST00000454591 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP9.41□□□□□ -0.9
ECHDC1-209ENST00000454591 NMUP48645 174 aa9.41□□□□□ -0.9
ECHDC1-209ENST00000454591 AMMECR1LQ6DCA0 310 aa9.41□□□□□ -0.9
ECHDC1-209ENST00000454591 CACNA1AO00555 2505 aa9.41□□□□□ -0.9
ECHDC1-209ENST00000454591 TRAV26-2A0A0B4J265 109 aa9.41□□□□□ -0.9
ECHDC1-209ENST00000454591 H7C1H1 209 aa9.41□□□□□ -0.9
ECHDC1-209ENST00000454591 AVPP01185 164 aa9.41□□□□□ -0.9
ECHDC1-209ENST00000454591 IGHV3-11P01762 117 aa9.41□□□□□ -0.9
ECHDC1-209ENST00000454591 S100A4P26447 101 aaKnown RBP9.41□□□□□ -0.9
ECHDC1-209ENST00000454591 RBX1P62877 108 aa9.41□□□□□ -0.9
ECHDC1-209ENST00000454591 TM4SF20Q53R12 229 aa9.41□□□□□ -0.9
ECHDC1-209ENST00000454591 ZC2HC1BQ5TFG8 222 aa9.41□□□□□ -0.9
ECHDC1-209ENST00000454591 Q6ZS46 218 aa9.41□□□□□ -0.9
ECHDC1-209ENST00000454591 WFDC3Q8IUB2 231 aa9.41□□□□□ -0.9
ECHDC1-209ENST00000454591 TM2D2Q9BX73 214 aa9.41□□□□□ -0.9
ECHDC1-209ENST00000454591 MRPL35Q9NZE8 188 aaKnown RBP9.41□□□□□ -0.9
ECHDC1-209ENST00000454591 PHLDA3Q9Y5J5 127 aa9.41□□□□□ -0.9
ECHDC1-209ENST00000454591 SPTBN4Q9H254 2564 aa9.41□□□□□ -0.9
ECHDC1-209ENST00000454591 F8VRH5 84 aa9.4□□□□□ -0.91
ECHDC1-209ENST00000454591 CDKN1BP46527 198 aa9.4□□□□□ -0.91
ECHDC1-209ENST00000454591 LINC00315P59091 139 aa9.4□□□□□ -0.91
ECHDC1-209ENST00000454591 RNASE8Q8TDE3 154 aaKnown RBP9.4□□□□□ -0.91
ECHDC1-209ENST00000454591 TRBV25-1A0A075B6N4 114 aa9.39□□□□□ -0.91
ECHDC1-209ENST00000454591 LGALS9O00182 355 aa9.39□□□□□ -0.91
ECHDC1-209ENST00000454591 FSHBP01225 129 aa9.39□□□□□ -0.91
ECHDC1-209ENST00000454591 RNASE4P34096 147 aaKnown RBP9.39□□□□□ -0.91
ECHDC1-209ENST00000454591 GTF2H5Q6ZYL4 71 aa9.39□□□□□ -0.91
ECHDC1-209ENST00000454591 LINC01356Q8N9X3 169 aa9.39□□□□□ -0.91
ECHDC1-209ENST00000454591 NEXN-AS1Q8NBZ9 246 aa9.39□□□□□ -0.91
ECHDC1-209ENST00000454591 CHAC1Q9BUX1 264 aa9.39□□□□□ -0.91
ECHDC1-209ENST00000454591 TRBV6-5A0A0K0K1A5 114 aa9.37□□□□□ -0.91
ECHDC1-209ENST00000454591 F6UB75 175 aa9.37□□□□□ -0.91
ECHDC1-209ENST00000454591 K7EP34 96 aa9.37□□□□□ -0.91
ECHDC1-209ENST00000454591 ERASQ7Z444 233 aa9.37□□□□□ -0.91
ECHDC1-209ENST00000454591 C14orf178Q8N769 122 aaPredicted RBP9.37□□□□□ -0.91
ECHDC1-209ENST00000454591 OR5A1Q8NGJ0 315 aa9.37□□□□□ -0.91
ECHDC1-209ENST00000454591 C9orf85Q96MD7 179 aa9.37□□□□□ -0.91
ECHDC1-209ENST00000454591 GAGE10A6NGK3 116 aa9.36□□□□□ -0.91
ECHDC1-209ENST00000454591 K7EQG2 157 aa9.36□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 160.7 ms