RNA–Protein interactions for RNA: ENST00000445329.5

TRIM6-205, Transcript of tripartite motif containing 6, human

TSL 1 (best) BASIC

Gene TRIM6, Length 2,951 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TRIM6-205	ENST00000445329	RHOH	Q15669	191 aa		5.24	□□□□□ -1.57
TRIM6-205	ENST00000445329	LINC00322	Q6ZN03	302 aa	Predicted RBP	5.24	□□□□□ -1.57
TRIM6-205	ENST00000445329	LINC00305	Q7Z4B0	112 aa		5.24	□□□□□ -1.57
TRIM6-205	ENST00000445329		Q8NA96	180 aa		5.24	□□□□□ -1.57
TRIM6-205	ENST00000445329	EMC6	Q9BV81	110 aa		5.24	□□□□□ -1.57
TRIM6-205	ENST00000445329	IGKV1-6	A0A0C4DH72	117 aa		5.24	□□□□□ -1.57
TRIM6-205	ENST00000445329		A0A1B0GUT8	65 aa		5.24	□□□□□ -1.57
TRIM6-205	ENST00000445329	ARMS2	P0C7Q2	107 aa		5.24	□□□□□ -1.57
TRIM6-205	ENST00000445329	LOX	P28300	417 aa	Predicted RBP	5.24	□□□□□ -1.57
TRIM6-205	ENST00000445329	SAA4	P35542	130 aa		5.24	□□□□□ -1.57
TRIM6-205	ENST00000445329	APOC4	P55056	127 aa		5.24	□□□□□ -1.57
TRIM6-205	ENST00000445329	RBM3	P98179	157 aa	Known RBP	5.24	□□□□□ -1.57
TRIM6-205	ENST00000445329	RIG	Q13278	110 aa		5.24	□□□□□ -1.57
TRIM6-205	ENST00000445329	FHL5	Q5TD97	284 aa		5.24	□□□□□ -1.57
TRIM6-205	ENST00000445329	NUP37	Q8NFH4	326 aa		5.24	□□□□□ -1.57
TRIM6-205	ENST00000445329	SRSF12	Q8WXF0	261 aa	Known RBP	5.24	□□□□□ -1.57
TRIM6-205	ENST00000445329	GFRA4	Q9GZZ7	299 aa		5.24	□□□□□ -1.57
TRIM6-205	ENST00000445329	KNTC1	P50748	2209 aa		5.23	□□□□□ -1.57
TRIM6-205	ENST00000445329		A0A1W2PNU3	283 aa	Predicted RBP	5.23	□□□□□ -1.57
TRIM6-205	ENST00000445329	FOXS1	O43638	330 aa		5.23	□□□□□ -1.57
TRIM6-205	ENST00000445329	CCL4	P13236	92 aa		5.23	□□□□□ -1.57
TRIM6-205	ENST00000445329	CCL1	P22362	96 aa		5.23	□□□□□ -1.57
TRIM6-205	ENST00000445329	CDA	P32320	146 aa		5.23	□□□□□ -1.57
TRIM6-205	ENST00000445329	DEFB134	Q4QY38	66 aa		5.23	□□□□□ -1.57
TRIM6-205	ENST00000445329	S100A7L2	Q5SY68	101 aa		5.23	□□□□□ -1.57
TRIM6-205	ENST00000445329		Q8N8P6	123 aa		5.23	□□□□□ -1.57
TRIM6-205	ENST00000445329	ZNF492	Q9P255	531 aa		5.23	□□□□□ -1.57
TRIM6-205	ENST00000445329	TRGV5	A0A0B4J1U4	118 aa		5.23	□□□□□ -1.57
TRIM6-205	ENST00000445329	PAX8	Q06710	450 aa		5.23	□□□□□ -1.57
TRIM6-205	ENST00000445329	RUSC1-AS1	Q66K80	236 aa		5.23	□□□□□ -1.57
TRIM6-205	ENST00000445329	GFRAL	Q6UXV0	394 aa		5.23	□□□□□ -1.57
TRIM6-205	ENST00000445329	SLC50A1	Q9BRV3	221 aa		5.23	□□□□□ -1.57
TRIM6-205	ENST00000445329		H7C423	109 aa		5.22	□□□□□ -1.57
TRIM6-205	ENST00000445329	DEFB121	Q5J5C9	76 aa		5.22	□□□□□ -1.57
TRIM6-205	ENST00000445329	ORMDL3	Q8N138	153 aa		5.22	□□□□□ -1.57
TRIM6-205	ENST00000445329	C11orf44	Q8N8P7	122 aa		5.22	□□□□□ -1.57
TRIM6-205	ENST00000445329	RNASE6	Q93091	150 aa	Known RBP	5.22	□□□□□ -1.57
TRIM6-205	ENST00000445329	LINC01600	Q96MT4	127 aa		5.22	□□□□□ -1.57
TRIM6-205	ENST00000445329	S1PR3	Q99500	378 aa		5.22	□□□□□ -1.57
TRIM6-205	ENST00000445329	RBM12B-AS1	Q9P1G2	102 aa		5.22	□□□□□ -1.57
TRIM6-205	ENST00000445329	MOB4	Q9Y3A3	225 aa		5.22	□□□□□ -1.57
TRIM6-205	ENST00000445329	RTTN	Q86VV8	2226 aa		5.22	□□□□□ -1.57
TRIM6-205	ENST00000445329	PRR14L	Q5THK1	2151 aa		5.22	□□□□□ -1.57
TRIM6-205	ENST00000445329	DMXL2	Q8TDJ6	3036 aa		5.22	□□□□□ -1.57
TRIM6-205	ENST00000445329		A0A1W2PQD3	144 aa		5.22	□□□□□ -1.57
TRIM6-205	ENST00000445329		Q6ZRU5	148 aa		5.22	□□□□□ -1.57
TRIM6-205	ENST00000445329	PRR15	Q8IV56	129 aa		5.22	□□□□□ -1.57
TRIM6-205	ENST00000445329	VKORC1L1	Q8N0U8	176 aa		5.22	□□□□□ -1.57
TRIM6-205	ENST00000445329	LY6G5B	Q8NDX9	201 aa		5.22	□□□□□ -1.57
TRIM6-205	ENST00000445329	LYZL4	Q96KX0	146 aa		5.22	□□□□□ -1.57
TRIM6-205	ENST00000445329	DSCAML1	Q8TD84	2053 aa		5.22	□□□□□ -1.57
TRIM6-205	ENST00000445329		M0R135	149 aa		5.22	□□□□□ -1.57
TRIM6-205	ENST00000445329	GFRA3	O60609	400 aa		5.22	□□□□□ -1.57
TRIM6-205	ENST00000445329	IGF1	P05019	195 aa		5.22	□□□□□ -1.57
TRIM6-205	ENST00000445329	MPLKIP	Q8TAP9	179 aa		5.22	□□□□□ -1.57
TRIM6-205	ENST00000445329	FMC1	Q96HJ9	113 aa		5.22	□□□□□ -1.57
TRIM6-205	ENST00000445329	SMKR1	H3BMG3	65 aa		5.21	□□□□□ -1.58
TRIM6-205	ENST00000445329	ERCC8	Q13216	396 aa		5.21	□□□□□ -1.58
TRIM6-205	ENST00000445329	SDIM1	Q6ZPB5	146 aa		5.21	□□□□□ -1.58
TRIM6-205	ENST00000445329		A0A0B4J2C4	111 aa		5.21	□□□□□ -1.58
TRIM6-205	ENST00000445329	IGKV1-12	A0A0C4DH73	117 aa		5.21	□□□□□ -1.58
TRIM6-205	ENST00000445329	C17orf100	A8MU93	164 aa		5.21	□□□□□ -1.58
TRIM6-205	ENST00000445329	SS18L1	O75177	396 aa	Predicted RBP	5.21	□□□□□ -1.58
TRIM6-205	ENST00000445329	IGKV1D-12	P01611	117 aa		5.21	□□□□□ -1.58
TRIM6-205	ENST00000445329	PLN	P26678	52 aa		5.21	□□□□□ -1.58
TRIM6-205	ENST00000445329	SPTBN2	O15020	2390 aa		5.2	□□□□□ -1.58
TRIM6-205	ENST00000445329	IGKV1-27	A0A075B6S5	117 aa		5.2	□□□□□ -1.58
TRIM6-205	ENST00000445329	IGHV3-33	P01772	117 aa		5.2	□□□□□ -1.58
TRIM6-205	ENST00000445329	RSPO4	Q2I0M5	234 aa	Predicted RBP	5.2	□□□□□ -1.58
TRIM6-205	ENST00000445329	ZNF329	Q86UD4	541 aa		5.2	□□□□□ -1.58
TRIM6-205	ENST00000445329	ITLN1	Q8WWA0	313 aa		5.2	□□□□□ -1.58
TRIM6-205	ENST00000445329	ZNF524	Q96C55	264 aa		5.2	□□□□□ -1.58
TRIM6-205	ENST00000445329	ZNF837	Q96EG3	531 aa	Predicted RBP	5.2	□□□□□ -1.58
TRIM6-205	ENST00000445329	SPEN	Q96T58	3664 aa	Known RBP	5.2	□□□□□ -1.58
TRIM6-205	ENST00000445329	SPTBN4	Q9H254	2564 aa		5.2	□□□□□ -1.58
TRIM6-205	ENST00000445329	SDK2	Q58EX2	2172 aa		5.2	□□□□□ -1.58
TRIM6-205	ENST00000445329	FAM223B	A6NKX1	122 aa		5.2	□□□□□ -1.58
TRIM6-205	ENST00000445329	USP17L23	D6RBM5	183 aa		5.2	□□□□□ -1.58
TRIM6-205	ENST00000445329	C20orf197	Q8N268	126 aa		5.2	□□□□□ -1.58
TRIM6-205	ENST00000445329	DCANP1	Q8TF63	244 aa		5.2	□□□□□ -1.58
TRIM6-205	ENST00000445329		Q9H3A6	140 aa		5.2	□□□□□ -1.58
TRIM6-205	ENST00000445329	SRRM4	A7MD48	611 aa	Known RBP	5.19	□□□□□ -1.58
TRIM6-205	ENST00000445329	PLAU	P00749	431 aa		5.19	□□□□□ -1.58
TRIM6-205	ENST00000445329	CKS2	P33552	79 aa		5.19	□□□□□ -1.58
TRIM6-205	ENST00000445329	SLC25A15	Q9Y619	301 aa		5.19	□□□□□ -1.58
TRIM6-205	ENST00000445329		A0A087WVE0	104 aa		5.19	□□□□□ -1.58
TRIM6-205	ENST00000445329	WNT9B	O14905	357 aa		5.19	□□□□□ -1.58
TRIM6-205	ENST00000445329	IGLV2-14	P01704	120 aa		5.19	□□□□□ -1.58
TRIM6-205	ENST00000445329	PRSS2	P07478	247 aa		5.19	□□□□□ -1.58
TRIM6-205	ENST00000445329	ZNF497	Q6ZNH5	498 aa		5.19	□□□□□ -1.58
TRIM6-205	ENST00000445329	NFAM1	Q8NET5	270 aa	Predicted RBP	5.19	□□□□□ -1.58
TRIM6-205	ENST00000445329	COPS9	Q8WXC6	57 aa		5.19	□□□□□ -1.58
TRIM6-205	ENST00000445329	C11orf68	Q9H3H3	251 aa	Known RBP	5.19	□□□□□ -1.58
TRIM6-205	ENST00000445329	TRBV7-6	A0A0J9YX20	115 aa		5.18	□□□□□ -1.58
TRIM6-205	ENST00000445329	PRR20E	P86478	221 aa		5.18	□□□□□ -1.58
TRIM6-205	ENST00000445329	PRR20C	P86479	221 aa		5.18	□□□□□ -1.58
TRIM6-205	ENST00000445329	PRR20D	P86480	221 aa		5.18	□□□□□ -1.58
TRIM6-205	ENST00000445329	PRR20B	P86481	221 aa		5.18	□□□□□ -1.58
TRIM6-205	ENST00000445329	PRR20A	P86496	221 aa		5.18	□□□□□ -1.58
TRIM6-205	ENST00000445329	LINC01559	Q495D7	138 aa		5.18	□□□□□ -1.58

Retrieved 100 of 20,778 RNA–protein pairs in 103.8 ms