RNA–Protein interactions for RNA: ENST00000443197.5

CALD1-210, Transcript of caldesmon 1, humanhuman

TSL 5

Gene CALD1, Length 4,173 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-210ENST00000443197 MRGPRG-AS1Q2M3A8 158 aa8.14□□□□□ -1.11
CALD1-210ENST00000443197 ERASQ7Z444 233 aa8.14□□□□□ -1.11
CALD1-210ENST00000443197 GATA1P15976 413 aaPredicted RBP8.14□□□□□ -1.11
CALD1-210ENST00000443197 NDUFAF3Q9BU61 184 aa8.14□□□□□ -1.11
CALD1-210ENST00000443197 IGKV3OR2-268A0A0C4DH90 116 aa8.14□□□□□ -1.11
CALD1-210ENST00000443197 NDUFS6O75380 124 aaKnown RBP8.14□□□□□ -1.11
CALD1-210ENST00000443197 TNFRSF6BO95407 300 aa8.14□□□□□ -1.11
CALD1-210ENST00000443197 IGHV4-31P0DP07 118 aa8.14□□□□□ -1.11
CALD1-210ENST00000443197 RIPPLY3P57055 190 aa8.14□□□□□ -1.11
CALD1-210ENST00000443197 NXT2Q9NPJ8 142 aaKnown RBP8.14□□□□□ -1.11
CALD1-210ENST00000443197 ZNF80P51504 273 aaPredicted RBP8.14□□□□□ -1.11
CALD1-210ENST00000443197 C16orf54Q6UWD8 224 aa8.14□□□□□ -1.11
CALD1-210ENST00000443197 YPEL4Q96NS1 127 aa8.14□□□□□ -1.11
CALD1-210ENST00000443197 MS4A6AQ9H2W1 248 aa8.14□□□□□ -1.11
CALD1-210ENST00000443197 POLR3KQ9Y2Y1 108 aaPredicted RBP8.14□□□□□ -1.11
CALD1-210ENST00000443197 TNFRSF18Q9Y5U5 241 aa8.14□□□□□ -1.11
CALD1-210ENST00000443197 DSCAML1Q8TD84 2053 aa8.13□□□□□ -1.11
CALD1-210ENST00000443197 TRAV9-2A0A087WT02 112 aa8.13□□□□□ -1.11
CALD1-210ENST00000443197 NPYP01303 97 aa8.13□□□□□ -1.11
CALD1-210ENST00000443197 SRSF9Q13242 221 aaKnown RBP eCLIP8.13□□□□□ -1.114e-6■■■■□ 19.6
CALD1-210ENST00000443197 RAB37Q96AX2 223 aa8.13□□□□□ -1.11
CALD1-210ENST00000443197 MIEN1Q9BRT3 115 aa8.13□□□□□ -1.11
CALD1-210ENST00000443197 FLNCQ14315 2725 aa8.13□□□□□ -1.11
CALD1-210ENST00000443197 H3BUA1 57 aa8.13□□□□□ -1.11
CALD1-210ENST00000443197 TACC2O95359 2948 aa8.13□□□□□ -1.11
CALD1-210ENST00000443197 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP8.13□□□□□ -1.11
CALD1-210ENST00000443197 SYS1-DBNDD2H3BUS1 97 aa8.13□□□□□ -1.11
CALD1-210ENST00000443197 LOXL1Q08397 574 aaPredicted RBP8.13□□□□□ -1.11
CALD1-210ENST00000443197 ZNF876PQ49A33 203 aa8.13□□□□□ -1.11
CALD1-210ENST00000443197 COL5A1-AS1Q5SY13 56 aa8.13□□□□□ -1.11
CALD1-210ENST00000443197 TMEM158Q8WZ71 300 aa8.13□□□□□ -1.11
CALD1-210ENST00000443197 ST20Q9HBF5 79 aa8.13□□□□□ -1.11
CALD1-210ENST00000443197 IGHV3-53P01767 116 aa8.12□□□□□ -1.11
CALD1-210ENST00000443197 GCSHP23434 173 aa8.12□□□□□ -1.11
CALD1-210ENST00000443197 SRSF1Q07955 248 aaKnown RBP eCLIP8.12□□□□□ -1.116e-8■■■■□ 19.9
CALD1-210ENST00000443197 TMEM170BQ5T4T1 132 aa8.12□□□□□ -1.11
CALD1-210ENST00000443197 NEGR1Q7Z3B1 354 aa8.12□□□□□ -1.11
CALD1-210ENST00000443197 LGALS1P09382 135 aaKnown RBP8.12□□□□□ -1.11
CALD1-210ENST00000443197 OR2K2Q8NGT1 345 aa8.12□□□□□ -1.11
CALD1-210ENST00000443197 TRGV2A0A075B6R0 118 aa8.12□□□□□ -1.11
CALD1-210ENST00000443197 TDRG1Q3Y452 100 aa8.12□□□□□ -1.11
CALD1-210ENST00000443197 JMJD8Q96S16 334 aa8.12□□□□□ -1.11
CALD1-210ENST00000443197 DPH3P1Q9H4G8 78 aa8.12□□□□□ -1.11
CALD1-210ENST00000443197 SMAD5-AS1Q9Y6J3 95 aa8.12□□□□□ -1.11
CALD1-210ENST00000443197 IGSF10Q6WRI0 2623 aa8.12□□□□□ -1.11
CALD1-210ENST00000443197 IGHV1-24A0A0C4DH33 117 aa8.11□□□□□ -1.11
CALD1-210ENST00000443197 APRG1Q8IVJ8 170 aa8.11□□□□□ -1.11
CALD1-210ENST00000443197 ZNF48Q96MX3 618 aaPredicted RBP8.11□□□□□ -1.11
CALD1-210ENST00000443197 MLST8Q9BVC4 326 aa8.11□□□□□ -1.11
CALD1-210ENST00000443197 SIGLEC8Q9NYZ4 499 aa8.11□□□□□ -1.11
CALD1-210ENST00000443197 IGF1P05019 195 aa8.11□□□□□ -1.11
CALD1-210ENST00000443197 MAJINQ3KP22 176 aa8.11□□□□□ -1.11
CALD1-210ENST00000443197 GDF5OSQ5U4N7 250 aa8.11□□□□□ -1.11
CALD1-210ENST00000443197 USP24Q9UPU5 2620 aa8.11□□□□□ -1.11
CALD1-210ENST00000443197 C19orf71A6NCJ1 209 aa8.11□□□□□ -1.11
CALD1-210ENST00000443197 OR11H12B2RN74 326 aa8.11□□□□□ -1.11
CALD1-210ENST00000443197 ATP5LO75964 103 aa8.11□□□□□ -1.11
CALD1-210ENST00000443197 ZFAND3Q9H8U3 227 aa8.11□□□□□ -1.11
CALD1-210ENST00000443197 NPIPB6E9PJ23 425 aa8.11□□□□□ -1.11
CALD1-210ENST00000443197 PAX2Q02962 417 aa8.11□□□□□ -1.11
CALD1-210ENST00000443197 COA6Q5JTJ3 125 aaKnown RBP8.11□□□□□ -1.11
CALD1-210ENST00000443197 LINC00173Q6ZV60 143 aa8.11□□□□□ -1.11
CALD1-210ENST00000443197 HERVK_113P61574 105 aa8.1□□□□□ -1.11
CALD1-210ENST00000443197 PET117Q6UWS5 81 aa8.1□□□□□ -1.11
CALD1-210ENST00000443197 STPG4Q8N801 248 aa8.1□□□□□ -1.11
CALD1-210ENST00000443197 CSTL1Q9H114 145 aa8.1□□□□□ -1.11
CALD1-210ENST00000443197 MYCNOSP40205 109 aa8.1□□□□□ -1.11
CALD1-210ENST00000443197 CDKN1BP46527 198 aa8.1□□□□□ -1.11
CALD1-210ENST00000443197 LAGE3Q14657 143 aa8.1□□□□□ -1.11
CALD1-210ENST00000443197 OR4C5Q8NGB2 326 aa8.1□□□□□ -1.11
CALD1-210ENST00000443197 LAMTOR2Q9Y2Q5 125 aa8.1□□□□□ -1.11
CALD1-210ENST00000443197 CRIP1P50238 77 aa8.09□□□□□ -1.11
CALD1-210ENST00000443197 TRGV1A0A0A0MS02 117 aa8.09□□□□□ -1.11
CALD1-210ENST00000443197 IGHV3-16A0A0C4DH30 117 aa8.09□□□□□ -1.11
CALD1-210ENST00000443197 SRSF2Q01130 221 aaKnown RBP8.09□□□□□ -1.11
CALD1-210ENST00000443197 AMMECR1LQ6DCA0 310 aa8.09□□□□□ -1.11
CALD1-210ENST00000443197 TRGV11A0A075B6L2 103 aa8.09□□□□□ -1.11
CALD1-210ENST00000443197 PPP1R17O96001 155 aa8.09□□□□□ -1.11
CALD1-210ENST00000443197 KIR3DS1Q14943 382 aa8.09□□□□□ -1.11
CALD1-210ENST00000443197 GTSCR1Q86UQ5 136 aa8.09□□□□□ -1.11
CALD1-210ENST00000443197 H7C1H1 209 aa8.08□□□□□ -1.12
CALD1-210ENST00000443197 IGKV3D-20A0A0C4DH25 116 aa8.08□□□□□ -1.12
CALD1-210ENST00000443197 Q1RN00 199 aa8.08□□□□□ -1.12
CALD1-210ENST00000443197 OR11H2Q8NH07 326 aa8.08□□□□□ -1.12
CALD1-210ENST00000443197 F8W735 103 aaPredicted RBP8.08□□□□□ -1.12
CALD1-210ENST00000443197 CCL24O00175 119 aa8.08□□□□□ -1.12
CALD1-210ENST00000443197 HTN3P15516 51 aa8.08□□□□□ -1.12
CALD1-210ENST00000443197 RNF151Q2KHN1 245 aa8.08□□□□□ -1.12
CALD1-210ENST00000443197 C12orf54Q6X4T0 127 aa8.08□□□□□ -1.12
CALD1-210ENST00000443197 C2orf70A6NJV1 201 aa8.07□□□□□ -1.12
CALD1-210ENST00000443197 IGLV2-11P01706 119 aa8.07□□□□□ -1.12
CALD1-210ENST00000443197 IGHG4P01861 327 aa8.07□□□□□ -1.12
CALD1-210ENST00000443197 DNLZQ5SXM8 178 aa8.07□□□□□ -1.12
CALD1-210ENST00000443197 HIST1H4GQ99525 98 aa8.07□□□□□ -1.12
CALD1-210ENST00000443197 RELNP78509 3460 aa8.07□□□□□ -1.12
CALD1-210ENST00000443197 EDN2P20800 178 aa8.07□□□□□ -1.12
CALD1-210ENST00000443197 PIFOQ8TCI5 191 aa8.07□□□□□ -1.12
CALD1-210ENST00000443197 CYSLTR1Q9Y271 337 aa8.07□□□□□ -1.12
CALD1-210ENST00000443197 RNF114Q9Y508 228 aa8.07□□□□□ -1.12
CALD1-210ENST00000443197 IGHV3-64A0A075B6Q5 118 aa8.07□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 51.2 ms