RNA–Protein interactions for RNA: ENST00000438055.5

TTC3-209, Transcript of tetratricopeptide repeat domain 3, humanhuman

TSL 5

Gene TTC3, Length 3,606 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC3-209ENST00000438055 ZFYVE26Q68DK2 2539 aa12.81□□□□□ -0.36
TTC3-209ENST00000438055 TMEM8BA6NDV4 472 aa12.81□□□□□ -0.36
TTC3-209ENST00000438055 LAGE3Q14657 143 aa12.81□□□□□ -0.36
TTC3-209ENST00000438055 COX8CQ7Z4L0 72 aa12.81□□□□□ -0.36
TTC3-209ENST00000438055 BOD1L2Q8IYS8 172 aa12.81□□□□□ -0.36
TTC3-209ENST00000438055 Q8N8P6 123 aa12.81□□□□□ -0.36
TTC3-209ENST00000438055 DPM2O94777 84 aa12.81□□□□□ -0.36
TTC3-209ENST00000438055 BLCAPP62952 87 aa12.81□□□□□ -0.36
TTC3-209ENST00000438055 GAGE12BA1L429 117 aa12.8□□□□□ -0.36
TTC3-209ENST00000438055 ATP5LO75964 103 aa12.8□□□□□ -0.36
TTC3-209ENST00000438055 IGKV3-20P01619 116 aa12.8□□□□□ -0.36
TTC3-209ENST00000438055 SCGB2A2Q13296 93 aa12.8□□□□□ -0.36
TTC3-209ENST00000438055 GTF2H5Q6ZYL4 71 aa12.8□□□□□ -0.36
TTC3-209ENST00000438055 OR4X2Q8NGF9 303 aa12.8□□□□□ -0.36
TTC3-209ENST00000438055 NPFFR1Q9GZQ6 430 aa12.8□□□□□ -0.36
TTC3-209ENST00000438055 MRPL35Q9NZE8 188 aaKnown RBP12.8□□□□□ -0.36
TTC3-209ENST00000438055 C20orf173Q96LM9 149 aa12.8□□□□□ -0.36
TTC3-209ENST00000438055 FAM223BA6NKX1 122 aa12.79□□□□□ -0.36
TTC3-209ENST00000438055 ASIPP42127 132 aa12.79□□□□□ -0.36
TTC3-209ENST00000438055 PRR9Q5T870 116 aa12.79□□□□□ -0.36
TTC3-209ENST00000438055 FAM223AQ8IWN6 122 aa12.79□□□□□ -0.36
TTC3-209ENST00000438055 CENPEQ02224 2701 aa12.79□□□□□ -0.36
TTC3-209ENST00000438055 F5H697 171 aa12.79□□□□□ -0.36
TTC3-209ENST00000438055 K7EP13 123 aa12.79□□□□□ -0.36
TTC3-209ENST00000438055 FGF6P10767 208 aa12.79□□□□□ -0.36
TTC3-209ENST00000438055 IGKV2D-26A0A0A0MRZ7 120 aa12.79□□□□□ -0.36
TTC3-209ENST00000438055 TRAV21A0A0B4J279 112 aa12.79□□□□□ -0.36
TTC3-209ENST00000438055 ODF1Q14990 250 aa12.79□□□□□ -0.36
TTC3-209ENST00000438055 CST9LQ9H4G1 147 aa12.79□□□□□ -0.36
TTC3-209ENST00000438055 A0A0G2JLM5 398 aa12.78□□□□□ -0.36
TTC3-209ENST00000438055 K7EMI3 77 aa12.78□□□□□ -0.36
TTC3-209ENST00000438055 SRSF1Q07955 248 aaKnown RBP eCLIP12.78□□□□□ -0.365e-7■■■■□ 19.4
TTC3-209ENST00000438055 RHPN1-AS1Q9BWJ2 59 aa12.78□□□□□ -0.36
TTC3-209ENST00000438055 C9orf47Q6ZRZ4 202 aa12.77□□□□□ -0.36
TTC3-209ENST00000438055 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP12.77□□□□□ -0.36
TTC3-209ENST00000438055 ANXA2RQ3ZCQ2 193 aa12.77□□□□□ -0.36
TTC3-209ENST00000438055 SCGB3A1Q96QR1 104 aa12.77□□□□□ -0.36
TTC3-209ENST00000438055 CNFNQ9BYD5 112 aa12.77□□□□□ -0.36
TTC3-209ENST00000438055 SRSF2Q01130 221 aaKnown RBP12.77□□□□□ -0.37
TTC3-209ENST00000438055 TLN2Q9Y4G6 2542 aa12.76□□□□□ -0.37
TTC3-209ENST00000438055 NHP2Q9NX24 153 aaKnown RBP12.76□□□□□ -0.37
TTC3-209ENST00000438055 IGHV7-4-1A0A0J9YVY3 117 aa12.76□□□□□ -0.37
TTC3-209ENST00000438055 GNRH2O43555 120 aa12.76□□□□□ -0.37
TTC3-209ENST00000438055 TMEM95Q3KNT9 176 aa12.76□□□□□ -0.37
TTC3-209ENST00000438055 DPF1Q92782 380 aa12.76□□□□□ -0.37
TTC3-209ENST00000438055 ZNF575Q86XF7 245 aa12.76□□□□□ -0.37
TTC3-209ENST00000438055 LINC00477Q96M19 166 aa12.76□□□□□ -0.37
TTC3-209ENST00000438055 SPCS1Q9Y6A9 102 aa12.75□□□□□ -0.37
TTC3-209ENST00000438055 OVOL1O14753 267 aa12.75□□□□□ -0.37
TTC3-209ENST00000438055 Q6ZS46 218 aa12.75□□□□□ -0.37
TTC3-209ENST00000438055 NEGR1Q7Z3B1 354 aa12.75□□□□□ -0.37
TTC3-209ENST00000438055 RPL39LQ96EH5 51 aaKnown RBP12.75□□□□□ -0.37
TTC3-209ENST00000438055 CHAC1Q9BUX1 264 aa12.75□□□□□ -0.37
TTC3-209ENST00000438055 MYO9AB2RTY4 2548 aa12.75□□□□□ -0.37
TTC3-209ENST00000438055 SMIM13P0DJ93 91 aa12.75□□□□□ -0.37
TTC3-209ENST00000438055 MRPL53Q96EL3 112 aaKnown RBP12.75□□□□□ -0.37
TTC3-209ENST00000438055 C9orf118A6NHY6 69 aa12.74□□□□□ -0.37
TTC3-209ENST00000438055 K7ERJ3 54 aa12.74□□□□□ -0.37
TTC3-209ENST00000438055 NDUFA4O00483 81 aa12.74□□□□□ -0.37
TTC3-209ENST00000438055 IGHV4-30-2A0A087WSY4 118 aa12.74□□□□□ -0.37
TTC3-209ENST00000438055 H3BRM9 83 aa12.74□□□□□ -0.37
TTC3-209ENST00000438055 FABP2P12104 132 aa12.74□□□□□ -0.37
TTC3-209ENST00000438055 OCIAD2Q56VL3 154 aa12.74□□□□□ -0.37
TTC3-209ENST00000438055 FAM74A4Q5TZK3 123 aa12.74□□□□□ -0.37
TTC3-209ENST00000438055 LRRK2Q5S007 2527 aa12.73□□□□□ -0.37
TTC3-209ENST00000438055 K7ERU9 68 aa12.73□□□□□ -0.37
TTC3-209ENST00000438055 SMIM2Q9BVW6 85 aa12.73□□□□□ -0.37
TTC3-209ENST00000438055 HIST1H4GQ99525 98 aa12.73□□□□□ -0.37
TTC3-209ENST00000438055 FXYD2P54710 66 aa12.73□□□□□ -0.37
TTC3-209ENST00000438055 SUMO2P61956 95 aaKnown RBP12.73□□□□□ -0.37
TTC3-209ENST00000438055 RBX1P62877 108 aa12.73□□□□□ -0.37
TTC3-209ENST00000438055 FAM159AQ6UWV7 190 aa12.73□□□□□ -0.37
TTC3-209ENST00000438055 PIFOQ8TCI5 191 aa12.73□□□□□ -0.37
TTC3-209ENST00000438055 NRGNQ92686 78 aa12.72□□□□□ -0.37
TTC3-209ENST00000438055 DPH3P1Q9H4G8 78 aa12.72□□□□□ -0.37
TTC3-209ENST00000438055 ABCA2Q9BZC7 2435 aa12.72□□□□□ -0.37
TTC3-209ENST00000438055 NRACQ8N912 160 aa12.72□□□□□ -0.37
TTC3-209ENST00000438055 SMPXQ9UHP9 88 aa12.72□□□□□ -0.37
TTC3-209ENST00000438055 U3KQE9 123 aa12.72□□□□□ -0.37
TTC3-209ENST00000438055 CELSR1Q9NYQ6 3014 aa12.72□□□□□ -0.37
TTC3-209ENST00000438055 PTPN13Q12923 2485 aa12.72□□□□□ -0.37
TTC3-209ENST00000438055 TRBV25-1A0A075B6N4 114 aa12.71□□□□□ -0.37
TTC3-209ENST00000438055 RPL24P83731 157 aaKnown RBP12.71□□□□□ -0.37
TTC3-209ENST00000438055 ADAMTSL5Q6ZMM2 481 aa12.71□□□□□ -0.37
TTC3-209ENST00000438055 USMG5Q96IX5 58 aa12.71□□□□□ -0.37
TTC3-209ENST00000438055 JMJD8Q96S16 334 aa12.71□□□□□ -0.37
TTC3-209ENST00000438055 MAPK1IP1LQ8NDC0 245 aa12.71□□□□□ -0.37
TTC3-209ENST00000438055 OR11H12B2RN74 326 aa12.71□□□□□ -0.38
TTC3-209ENST00000438055 ZNF688P0C7X2 276 aa12.71□□□□□ -0.38
TTC3-209ENST00000438055 HTN1P15515 57 aa12.71□□□□□ -0.38
TTC3-209ENST00000438055 ZFAND2AQ8N6M9 145 aa12.71□□□□□ -0.38
TTC3-209ENST00000438055 OR11H1Q8NG94 326 aa12.71□□□□□ -0.38
TTC3-209ENST00000438055 OR11H2Q8NH07 326 aa12.71□□□□□ -0.38
TTC3-209ENST00000438055 DAZ1Q9NQZ3 744 aaKnown RBP12.71□□□□□ -0.38
TTC3-209ENST00000438055 TRAV12-3A0A0B4J271 114 aa12.7□□□□□ -0.38
TTC3-209ENST00000438055 SIVA1O15304 175 aa12.7□□□□□ -0.38
TTC3-209ENST00000438055 CD7P09564 240 aa12.7□□□□□ -0.38
TTC3-209ENST00000438055 A0A087WWL8 130 aa12.7□□□□□ -0.38
TTC3-209ENST00000438055 MSMBP08118 114 aa12.7□□□□□ -0.38
TTC3-209ENST00000438055 SAMD5Q5TGI4 173 aa12.7□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 61.2 ms