RNA–Protein interactions for RNA: ENST00000428014.1

SMC1A-203, Transcript of structural maintenance of chromosomes 1A, humanhuman

TSL 3

Gene SMC1A, Length 868 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC1A-203ENST00000428014 PFN1P07737 140 aaKnown RBP6.41□□□□□ -1.38
SMC1A-203ENST00000428014 DEFB130BP0DP73 79 aa6.41□□□□□ -1.38
SMC1A-203ENST00000428014 DEFB130AP0DP74 79 aa6.41□□□□□ -1.38
SMC1A-203ENST00000428014 SUMO1P63165 101 aaKnown RBP6.41□□□□□ -1.38
SMC1A-203ENST00000428014 FLI1Q01543 452 aaPredicted RBP6.41□□□□□ -1.38
SMC1A-203ENST00000428014 ZNF726P1Q15940 193 aa6.41□□□□□ -1.38
SMC1A-203ENST00000428014 TMEM88Q6PEY1 159 aa6.41□□□□□ -1.38
SMC1A-203ENST00000428014 GOLT1AQ6ZVE7 132 aa6.41□□□□□ -1.38
SMC1A-203ENST00000428014 UPK3BQ9BT76 320 aa6.41□□□□□ -1.38
SMC1A-203ENST00000428014 TREM1Q9NP99 234 aa6.41□□□□□ -1.38
SMC1A-203ENST00000428014 MAP1LC3B2A6NCE7 125 aa6.4□□□□□ -1.38
SMC1A-203ENST00000428014 FAM74A7A6NL05 159 aa6.4□□□□□ -1.38
SMC1A-203ENST00000428014 HTN1P15515 57 aa6.4□□□□□ -1.38
SMC1A-203ENST00000428014 CCL18P55774 89 aa6.4□□□□□ -1.38
SMC1A-203ENST00000428014 DNLZQ5SXM8 178 aa6.4□□□□□ -1.38
SMC1A-203ENST00000428014 PRR9Q5T870 116 aa6.4□□□□□ -1.38
SMC1A-203ENST00000428014 MAP1LC3BQ9GZQ8 125 aa6.4□□□□□ -1.38
SMC1A-203ENST00000428014 PSG8Q9UQ74 426 aa6.4□□□□□ -1.38
SMC1A-203ENST00000428014 VPS13DQ5THJ4 4388 aa6.4□□□□□ -1.39
SMC1A-203ENST00000428014 DNAH6Q9C0G6 4158 aa6.39□□□□□ -1.39
SMC1A-203ENST00000428014 A0A1W2PPQ1 181 aa6.39□□□□□ -1.39
SMC1A-203ENST00000428014 F5H768 121 aa6.39□□□□□ -1.39
SMC1A-203ENST00000428014 SMUG1Q53HV7 270 aa6.39□□□□□ -1.39
SMC1A-203ENST00000428014 Q6ZR54 194 aa6.39□□□□□ -1.39
SMC1A-203ENST00000428014 ZNF767PQ75MW2 155 aa6.39□□□□□ -1.39
SMC1A-203ENST00000428014 SH2D6Q7Z4S9 175 aa6.39□□□□□ -1.39
SMC1A-203ENST00000428014 Q8TAT8 98 aa6.39□□□□□ -1.39
SMC1A-203ENST00000428014 FMC1Q96HJ9 113 aa6.39□□□□□ -1.39
SMC1A-203ENST00000428014 SDF2L1Q9HCN8 221 aa6.39□□□□□ -1.39
SMC1A-203ENST00000428014 GSN-AS1Q9NRJ2 163 aa6.39□□□□□ -1.39
SMC1A-203ENST00000428014 PRO0255Q9UI72 69 aa6.39□□□□□ -1.39
SMC1A-203ENST00000428014 TRGV2A0A075B6R0 118 aa6.38□□□□□ -1.39
SMC1A-203ENST00000428014 TEX46H3BTG2 121 aa6.38□□□□□ -1.39
SMC1A-203ENST00000428014 M0R2P5 195 aa6.38□□□□□ -1.39
SMC1A-203ENST00000428014 PEX7O00628 323 aa6.38□□□□□ -1.39
SMC1A-203ENST00000428014 ORM1P02763 201 aa6.38□□□□□ -1.39
SMC1A-203ENST00000428014 PRM2P04554 102 aa6.38□□□□□ -1.39
SMC1A-203ENST00000428014 CXCL1P09341 107 aa6.38□□□□□ -1.39
SMC1A-203ENST00000428014 TAGLN2P37802 199 aaKnown RBP6.38□□□□□ -1.39
SMC1A-203ENST00000428014 Q6ZTI0 123 aa6.38□□□□□ -1.39
SMC1A-203ENST00000428014 SSX7Q7RTT5 188 aa6.38□□□□□ -1.39
SMC1A-203ENST00000428014 TVP23CQ96ET8 276 aa6.38□□□□□ -1.39
SMC1A-203ENST00000428014 SMIM12Q96EX1 92 aa6.38□□□□□ -1.39
SMC1A-203ENST00000428014 TRAV4A0A0B4J268 109 aa6.37□□□□□ -1.39
SMC1A-203ENST00000428014 IGHV3-16A0A0C4DH30 117 aa6.37□□□□□ -1.39
SMC1A-203ENST00000428014 GAGE12BA1L429 117 aa6.37□□□□□ -1.39
SMC1A-203ENST00000428014 FABP5P3A8MUU1 101 aa6.37□□□□□ -1.39
SMC1A-203ENST00000428014 HMGB3O15347 200 aaKnown RBP6.37□□□□□ -1.39
SMC1A-203ENST00000428014 NDUFS6O75380 124 aaKnown RBP6.37□□□□□ -1.39
SMC1A-203ENST00000428014 GAGE7O76087 117 aa6.37□□□□□ -1.39
SMC1A-203ENST00000428014 IFNA7P01567 189 aa6.37□□□□□ -1.39
SMC1A-203ENST00000428014 GAGE12FP0CL80 117 aa6.37□□□□□ -1.39
SMC1A-203ENST00000428014 GAGE12GP0CL81 117 aa6.37□□□□□ -1.39
SMC1A-203ENST00000428014 GAGE12IP0CL82 117 aa6.37□□□□□ -1.39
SMC1A-203ENST00000428014 TIRAPP58753 221 aa6.37□□□□□ -1.39
SMC1A-203ENST00000428014 TMEM183BQ1AE95 376 aa6.37□□□□□ -1.39
SMC1A-203ENST00000428014 SOHLH1Q5JUK2 328 aa6.37□□□□□ -1.39
SMC1A-203ENST00000428014 HYDINQ4G0P3 5121 aa6.37□□□□□ -1.39
SMC1A-203ENST00000428014 NACAE9PAV3 2078 aa6.37□□□□□ -1.39
SMC1A-203ENST00000428014 TRAV26-1A0A087WT03 109 aa6.36□□□□□ -1.39
SMC1A-203ENST00000428014 TRGV1A0A0A0MS02 117 aa6.36□□□□□ -1.39
SMC1A-203ENST00000428014 TRAV8-1A0A0A6YYK1 113 aa6.36□□□□□ -1.39
SMC1A-203ENST00000428014 J3KRW8 73 aa6.36□□□□□ -1.39
SMC1A-203ENST00000428014 GCGP01275 180 aa6.36□□□□□ -1.39
SMC1A-203ENST00000428014 LTAP01374 205 aa6.36□□□□□ -1.39
SMC1A-203ENST00000428014 HTN3P15516 51 aa6.36□□□□□ -1.39
SMC1A-203ENST00000428014 HOXA5P20719 270 aa6.36□□□□□ -1.39
SMC1A-203ENST00000428014 SULT1A2P50226 295 aa6.36□□□□□ -1.39
SMC1A-203ENST00000428014 MRPL23Q16540 153 aaKnown RBP6.36□□□□□ -1.39
SMC1A-203ENST00000428014 TTC32Q5I0X7 151 aa6.36□□□□□ -1.39
SMC1A-203ENST00000428014 TEX261Q6UWH6 196 aa6.36□□□□□ -1.39
SMC1A-203ENST00000428014 UBE2DNLQ8IWF7 75 aa6.36□□□□□ -1.39
SMC1A-203ENST00000428014 ZNRF2Q8NHG8 242 aa6.36□□□□□ -1.39
SMC1A-203ENST00000428014 C9orf85Q96MD7 179 aa6.36□□□□□ -1.39
SMC1A-203ENST00000428014 MANBALQ9NQG1 85 aa6.36□□□□□ -1.39
SMC1A-203ENST00000428014 IL36BQ9NZH7 164 aa6.36□□□□□ -1.39
SMC1A-203ENST00000428014 MRPS16Q9Y3D3 137 aaKnown RBP6.36□□□□□ -1.39
SMC1A-203ENST00000428014 TYMSP04818 313 aa6.35□□□□□ -1.39
SMC1A-203ENST00000428014 MED14OSP0DP75 135 aa6.35□□□□□ -1.39
SMC1A-203ENST00000428014 CRYBA4P53673 196 aa6.35□□□□□ -1.39
SMC1A-203ENST00000428014 GNG5P63218 68 aa6.35□□□□□ -1.39
SMC1A-203ENST00000428014 ZNF674Q2M3X9 581 aa6.35□□□□□ -1.39
SMC1A-203ENST00000428014 ALKAL2Q6UX46 152 aa6.35□□□□□ -1.39
SMC1A-203ENST00000428014 ZFP2Q6ZN57 461 aa6.35□□□□□ -1.39
SMC1A-203ENST00000428014 Q86TA4 180 aa6.35□□□□□ -1.39
SMC1A-203ENST00000428014 TMEM183AQ8IXX5 376 aa6.35□□□□□ -1.39
SMC1A-203ENST00000428014 SFT2D1Q8WV19 159 aa6.35□□□□□ -1.39
SMC1A-203ENST00000428014 C11orf52Q96A22 123 aa6.35□□□□□ -1.39
SMC1A-203ENST00000428014 VSIG2Q96IQ7 327 aa6.35□□□□□ -1.39
SMC1A-203ENST00000428014 MDFICQ9P1T7 246 aa6.35□□□□□ -1.39
SMC1A-203ENST00000428014 HHLA3Q9XRX5 114 aa6.35□□□□□ -1.39
SMC1A-203ENST00000428014 A0A096LPF7 62 aa6.34□□□□□ -1.39
SMC1A-203ENST00000428014 TRBV6-4A0A1B0GX49 114 aa6.34□□□□□ -1.39
SMC1A-203ENST00000428014 C9JCJ5 164 aa6.34□□□□□ -1.39
SMC1A-203ENST00000428014 UBE2G1P62253 170 aa6.34□□□□□ -1.39
SMC1A-203ENST00000428014 OR5I1Q13606 314 aa6.34□□□□□ -1.39
SMC1A-203ENST00000428014 FHL2Q14192 279 aa6.34□□□□□ -1.39
SMC1A-203ENST00000428014 MLST8Q9BVC4 326 aa6.34□□□□□ -1.39
SMC1A-203ENST00000428014 ICOSQ9Y6W8 199 aa6.34□□□□□ -1.39
SMC1A-203ENST00000428014 NBDYA0A0U1RRE5 68 aa6.33□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 69.4 ms