RNA–Protein interactions for RNA: ENST00000425056.5

GPC1-203, Transcript of glypican 1, humanhuman

TSL 5

Gene GPC1, Length 1,085 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC1-203ENST00000425056 TNFRSF18Q9Y5U5 241 aa12.05□□□□□ -0.48
GPC1-203ENST00000425056 TRAV9-2A0A087WT02 112 aa12.04□□□□□ -0.48
GPC1-203ENST00000425056 FXYD6-FXYD2A0A087WZ82 144 aa12.04□□□□□ -0.48
GPC1-203ENST00000425056 GYPEP15421 78 aa12.04□□□□□ -0.48
GPC1-203ENST00000425056 ACOT6Q3I5F7 207 aaPredicted RBP12.04□□□□□ -0.48
GPC1-203ENST00000425056 Q5BKY6 102 aa12.04□□□□□ -0.48
GPC1-203ENST00000425056 WFDC1Q9HC57 220 aa12.04□□□□□ -0.48
GPC1-203ENST00000425056 RPH3ALQ9UNE2 315 aa12.04□□□□□ -0.48
GPC1-203ENST00000425056 TRAV21A0A0B4J279 112 aa12.03□□□□□ -0.48
GPC1-203ENST00000425056 IGHV3-16A0A0C4DH30 117 aa12.03□□□□□ -0.48
GPC1-203ENST00000425056 C9JCJ5 164 aa12.03□□□□□ -0.48
GPC1-203ENST00000425056 G3V3Q6 166 aa12.03□□□□□ -0.48
GPC1-203ENST00000425056 M0R2P5 195 aa12.03□□□□□ -0.48
GPC1-203ENST00000425056 DNAH10OSP0CZ25 163 aa12.03□□□□□ -0.48
GPC1-203ENST00000425056 GOLT1AQ6ZVE7 132 aa12.03□□□□□ -0.48
GPC1-203ENST00000425056 INO80EQ8NBZ0 244 aaPredicted RBP12.03□□□□□ -0.48
GPC1-203ENST00000425056 TXNDC17Q9BRA2 123 aa12.03□□□□□ -0.48
GPC1-203ENST00000425056 A0A1W2PPV4 95 aa12.02□□□□□ -0.49
GPC1-203ENST00000425056 RAB2AP61019 212 aa12.02□□□□□ -0.49
GPC1-203ENST00000425056 TVP23CQ96ET8 276 aa12.02□□□□□ -0.49
GPC1-203ENST00000425056 AQP10Q96PS8 301 aa12.02□□□□□ -0.49
GPC1-203ENST00000425056 MSRB1Q9NZV6 116 aa12.02□□□□□ -0.49
GPC1-203ENST00000425056 A0A087WTM6 91 aa12.01□□□□□ -0.49
GPC1-203ENST00000425056 TRAV8-1A0A0A6YYK1 113 aa12.01□□□□□ -0.49
GPC1-203ENST00000425056 HMSDA8MTL9 139 aa12.01□□□□□ -0.49
GPC1-203ENST00000425056 F6UZH7 168 aa12.01□□□□□ -0.49
GPC1-203ENST00000425056 SMLR1H3BR10 107 aa12.01□□□□□ -0.49
GPC1-203ENST00000425056 GNRH2O43555 120 aa12.01□□□□□ -0.49
GPC1-203ENST00000425056 C1QBP02746 253 aa12.01□□□□□ -0.49
GPC1-203ENST00000425056 TYMSP04818 313 aa12.01□□□□□ -0.49
GPC1-203ENST00000425056 EVI2AP22794 236 aa12.01□□□□□ -0.49
GPC1-203ENST00000425056 FUSP35637 526 aaKnown RBP eCLIP12.01□□□□□ -0.49
GPC1-203ENST00000425056 OR4C5Q8NGB2 326 aa12.01□□□□□ -0.49
GPC1-203ENST00000425056 TREM1Q9NP99 234 aa12.01□□□□□ -0.49
GPC1-203ENST00000425056 TNFSF18Q9UNG2 199 aa12.01□□□□□ -0.49
GPC1-203ENST00000425056 SDF2L1Q9HCN8 221 aa12□□□□□ -0.49
GPC1-203ENST00000425056 ARPC5O15511 151 aa11.99□□□□□ -0.49
GPC1-203ENST00000425056 PFDN1O60925 122 aa11.99□□□□□ -0.49
GPC1-203ENST00000425056 TIRAPP58753 221 aa11.99□□□□□ -0.49
GPC1-203ENST00000425056 GNG5P63218 68 aa11.99□□□□□ -0.49
GPC1-203ENST00000425056 SH2D6Q7Z4S9 175 aa11.99□□□□□ -0.49
GPC1-203ENST00000425056 C10orf126Q8N4M7 172 aa11.99□□□□□ -0.49
GPC1-203ENST00000425056 OR10G9Q8NGN4 311 aa11.99□□□□□ -0.49
GPC1-203ENST00000425056 OR10G7Q8NGN6 311 aa11.99□□□□□ -0.49
GPC1-203ENST00000425056 KCNS1Q96KK3 526 aa11.99□□□□□ -0.49
GPC1-203ENST00000425056 LOC100131303A0A0U1RQF7 123 aa11.98□□□□□ -0.49
GPC1-203ENST00000425056 SERTM2A0A1B0GWG4 89 aa11.98□□□□□ -0.49
GPC1-203ENST00000425056 HMGB3O15347 200 aaKnown RBP11.98□□□□□ -0.49
GPC1-203ENST00000425056 ARL14EPLP0DKL9 152 aa11.98□□□□□ -0.49
GPC1-203ENST00000425056 GATA1P15976 413 aaPredicted RBP11.98□□□□□ -0.49
GPC1-203ENST00000425056 ZNF345Q14585 488 aa11.98□□□□□ -0.49
GPC1-203ENST00000425056 OR2G3Q8NGZ4 309 aa11.98□□□□□ -0.49
GPC1-203ENST00000425056 RNF222A6NCQ9 220 aa11.97□□□□□ -0.49
GPC1-203ENST00000425056 CRYGDP07320 174 aa11.97□□□□□ -0.49
GPC1-203ENST00000425056 STAG3L2P0CL84 134 aa11.97□□□□□ -0.49
GPC1-203ENST00000425056 STAG3L3P0CL85 134 aa11.97□□□□□ -0.49
GPC1-203ENST00000425056 CDC34P49427 236 aaPredicted RBP11.97□□□□□ -0.49
GPC1-203ENST00000425056 ZFP69Q49AA0 526 aa11.97□□□□□ -0.49
GPC1-203ENST00000425056 OR11H4Q8NGC9 324 aa11.97□□□□□ -0.49
GPC1-203ENST00000425056 NDFIP1Q9BT67 221 aa11.97□□□□□ -0.49
GPC1-203ENST00000425056 EPM2AB3EWF7 344 aa11.96□□□□□ -0.49
GPC1-203ENST00000425056 XGP55808 180 aa11.96□□□□□ -0.49
GPC1-203ENST00000425056 C5orf17Q8NAS9 161 aa11.96□□□□□ -0.49
GPC1-203ENST00000425056 SUN5Q8TC36 379 aa11.96□□□□□ -0.49
GPC1-203ENST00000425056 A0A0D9SG52 128 aa11.95□□□□□ -0.5
GPC1-203ENST00000425056 FBLL1A6NHQ2 334 aaKnown RBP11.95□□□□□ -0.5
GPC1-203ENST00000425056 TAAR5O14804 337 aa11.95□□□□□ -0.5
GPC1-203ENST00000425056 TCRAP04437 139 aa11.95□□□□□ -0.5
GPC1-203ENST00000425056 KRTAP10-1P60331 282 aa11.95□□□□□ -0.5
GPC1-203ENST00000425056 KCNRGQ8N5I3 272 aa11.95□□□□□ -0.5
GPC1-203ENST00000425056 NHLRC2Q8NBF2 726 aa11.95□□□□□ -0.5
GPC1-203ENST00000425056 SGK494Q96LW2 274 aa11.95□□□□□ -0.5
GPC1-203ENST00000425056 PSMG3Q9BT73 122 aaPredicted RBP11.95□□□□□ -0.5
GPC1-203ENST00000425056 C11orf21Q9P2W6 132 aa11.95□□□□□ -0.5
GPC1-203ENST00000425056 IGHV3-38A0A0C4DH36 116 aa11.94□□□□□ -0.5
GPC1-203ENST00000425056 GCHFRP30047 84 aa11.94□□□□□ -0.5
GPC1-203ENST00000425056 PPT1P50897 306 aa11.94□□□□□ -0.5
GPC1-203ENST00000425056 ZNF80P51504 273 aaPredicted RBP11.94□□□□□ -0.5
GPC1-203ENST00000425056 ZNF876PQ49A33 203 aa11.94□□□□□ -0.5
GPC1-203ENST00000425056 LINC01556Q5JQF7 62 aa11.94□□□□□ -0.5
GPC1-203ENST00000425056 SLC25A29Q8N8R3 303 aa11.94□□□□□ -0.5
GPC1-203ENST00000425056 HSD17B11Q8NBQ5 300 aa11.94□□□□□ -0.5
GPC1-203ENST00000425056 RAB24Q969Q5 203 aa11.94□□□□□ -0.5
GPC1-203ENST00000425056 K7EQM0 130 aa11.93□□□□□ -0.5
GPC1-203ENST00000425056 CIDEAO60543 219 aa11.93□□□□□ -0.5
GPC1-203ENST00000425056 CFAP126Q5VTH2 177 aa11.93□□□□□ -0.5
GPC1-203ENST00000425056 DPPA3Q6W0C5 159 aa11.93□□□□□ -0.5
GPC1-203ENST00000425056 C9orf85Q96MD7 179 aa11.93□□□□□ -0.5
GPC1-203ENST00000425056 FAT1Q14517 4588 aa11.92□□□□□ -0.5
GPC1-203ENST00000425056 BORCS7-ASMTA0A0B4J1R7 106 aa11.92□□□□□ -0.5
GPC1-203ENST00000425056 TRBV6-4A0A1B0GX49 114 aa11.92□□□□□ -0.5
GPC1-203ENST00000425056 GGTLC3B5MD39 225 aa11.92□□□□□ -0.5
GPC1-203ENST00000425056 RS1O15537 224 aa11.92□□□□□ -0.5
GPC1-203ENST00000425056 GCGP01275 180 aa11.92□□□□□ -0.5
GPC1-203ENST00000425056 IGLV2-11P01706 119 aa11.92□□□□□ -0.5
GPC1-203ENST00000425056 PFN1P07737 140 aaKnown RBP11.92□□□□□ -0.5
GPC1-203ENST00000425056 ATP6V0CP27449 155 aa11.92□□□□□ -0.5
GPC1-203ENST00000425056 RHOHQ15669 191 aa11.92□□□□□ -0.5
GPC1-203ENST00000425056 PRADC1Q9BSG0 188 aa11.92□□□□□ -0.5
GPC1-203ENST00000425056 PSG8Q9UQ74 426 aa11.92□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 76.2 ms