RNA–Protein interactions for RNA: ENST00000424634.5

NUP50-207, Transcript of nucleoporin 50, humanhuman

TSL 3

Gene NUP50, Length 579 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-207ENST00000424634 NXPH4O95158 308 aa12.63□□□□□ -0.39
NUP50-207ENST00000424634 TYMSP04818 313 aa12.63□□□□□ -0.39
NUP50-207ENST00000424634 MRPL23Q16540 153 aaKnown RBP12.63□□□□□ -0.39
NUP50-207ENST00000424634 MBP02144 154 aa12.62□□□□□ -0.39
NUP50-207ENST00000424634 TCRAP04437 139 aa12.62□□□□□ -0.39
NUP50-207ENST00000424634 ZNF80P51504 273 aaPredicted RBP12.62□□□□□ -0.39
NUP50-207ENST00000424634 RPL7L1Q6DKI1 246 aaKnown RBP12.62□□□□□ -0.39
NUP50-207ENST00000424634 C11orf21Q9P2W6 132 aa12.62□□□□□ -0.39
NUP50-207ENST00000424634 TNFSF18Q9UNG2 199 aa12.62□□□□□ -0.39
NUP50-207ENST00000424634 K7EQD1 137 aa12.61□□□□□ -0.39
NUP50-207ENST00000424634 M0R2P5 195 aa12.61□□□□□ -0.39
NUP50-207ENST00000424634 IGLV2-11P01706 119 aa12.61□□□□□ -0.39
NUP50-207ENST00000424634 LINC00315P59091 139 aa12.61□□□□□ -0.39
NUP50-207ENST00000424634 SUMO1P63165 101 aaKnown RBP12.61□□□□□ -0.39
NUP50-207ENST00000424634 C5orf17Q8NAS9 161 aa12.61□□□□□ -0.39
NUP50-207ENST00000424634 ASB13Q8WXK3 278 aa12.61□□□□□ -0.39
NUP50-207ENST00000424634 TRAV4A0A0B4J268 109 aa12.6□□□□□ -0.39
NUP50-207ENST00000424634 GGTLC3B5MD39 225 aa12.6□□□□□ -0.39
NUP50-207ENST00000424634 BTF3P20290 206 aaKnown RBP12.6□□□□□ -0.39
NUP50-207ENST00000424634 Q6ZRN7 208 aaPredicted RBP12.6□□□□□ -0.39
NUP50-207ENST00000424634 NEGR1Q7Z3B1 354 aa12.6□□□□□ -0.39
NUP50-207ENST00000424634 SPATA12Q7Z6I5 190 aa12.6□□□□□ -0.39
NUP50-207ENST00000424634 INO80EQ8NBZ0 244 aaPredicted RBP12.6□□□□□ -0.39
NUP50-207ENST00000424634 KRTAP4-5Q9BYR2 181 aa12.6□□□□□ -0.39
NUP50-207ENST00000424634 ACTR3CQ9C0K3 210 aaPredicted RBP12.6□□□□□ -0.39
NUP50-207ENST00000424634 EPDR1Q9UM22 224 aa12.6□□□□□ -0.39
NUP50-207ENST00000424634 PSG8Q9UQ74 426 aa12.6□□□□□ -0.39
NUP50-207ENST00000424634 FXYD6-FXYD2A0A087WZ82 144 aa12.59□□□□□ -0.39
NUP50-207ENST00000424634 SERTM2A0A1B0GWG4 89 aa12.59□□□□□ -0.39
NUP50-207ENST00000424634 G3V3Q6 166 aa12.59□□□□□ -0.39
NUP50-207ENST00000424634 CXorf1O96002 111 aa12.59□□□□□ -0.39
NUP50-207ENST00000424634 GYPEP15421 78 aa12.59□□□□□ -0.39
NUP50-207ENST00000424634 KRTAP10-2P60368 255 aa12.59□□□□□ -0.39
NUP50-207ENST00000424634 ZNF726P1Q15940 193 aa12.59□□□□□ -0.39
NUP50-207ENST00000424634 OR4C5Q8NGB2 326 aa12.59□□□□□ -0.39
NUP50-207ENST00000424634 KCNS1Q96KK3 526 aa12.59□□□□□ -0.39
NUP50-207ENST00000424634 SDF2L1Q9HCN8 221 aa12.59□□□□□ -0.39
NUP50-207ENST00000424634 TMEM167BQ9NRX6 74 aa12.59□□□□□ -0.39
NUP50-207ENST00000424634 TNFRSF18Q9Y5U5 241 aa12.59□□□□□ -0.39
NUP50-207ENST00000424634 OR2T35Q8NGX2 323 aa12.58□□□□□ -0.4
NUP50-207ENST00000424634 LOC100131303A0A0U1RQF7 123 aa12.57□□□□□ -0.4
NUP50-207ENST00000424634 GCGP01275 180 aa12.57□□□□□ -0.4
NUP50-207ENST00000424634 SRIP30626 198 aa12.57□□□□□ -0.4
NUP50-207ENST00000424634 FLI1Q01543 452 aaPredicted RBP12.57□□□□□ -0.4
NUP50-207ENST00000424634 PRNTQ86SH4 94 aa12.57□□□□□ -0.4
NUP50-207ENST00000424634 LINC00479Q96M42 142 aa12.57□□□□□ -0.4
NUP50-207ENST00000424634 NDFIP1Q9BT67 221 aa12.57□□□□□ -0.4
NUP50-207ENST00000424634 K7EQM0 130 aa12.56□□□□□ -0.4
NUP50-207ENST00000424634 ORM1P02763 201 aa12.56□□□□□ -0.4
NUP50-207ENST00000424634 DPPA3Q6W0C5 159 aa12.56□□□□□ -0.4
NUP50-207ENST00000424634 CYB561D1Q8N8Q1 229 aa12.56□□□□□ -0.4
NUP50-207ENST00000424634 TMEM75Q8N9X5 138 aa12.56□□□□□ -0.4
NUP50-207ENST00000424634 BORCS7-ASMTA0A0B4J1R7 106 aa12.55□□□□□ -0.4
NUP50-207ENST00000424634 A0A1W2PRE2 83 aa12.55□□□□□ -0.4
NUP50-207ENST00000424634 TAAR5O14804 337 aa12.55□□□□□ -0.4
NUP50-207ENST00000424634 CDK2AP2O75956 126 aa12.55□□□□□ -0.4
NUP50-207ENST00000424634 GATA1P15976 413 aaPredicted RBP12.55□□□□□ -0.4
NUP50-207ENST00000424634 WFDC10BQ8IUB3 73 aa12.55□□□□□ -0.4
NUP50-207ENST00000424634 TRAV34A0A0B4J273 112 aa12.54□□□□□ -0.4
NUP50-207ENST00000424634 C9JCJ5 164 aa12.54□□□□□ -0.4
NUP50-207ENST00000424634 PFN1P07737 140 aaKnown RBP12.54□□□□□ -0.4
NUP50-207ENST00000424634 ZNF876PQ49A33 203 aa12.54□□□□□ -0.4
NUP50-207ENST00000424634 SMUG1Q53HV7 270 aa12.54□□□□□ -0.4
NUP50-207ENST00000424634 PCNPQ8WW12 178 aaKnown RBP12.54□□□□□ -0.4
NUP50-207ENST00000424634 C9orf85Q96MD7 179 aa12.54□□□□□ -0.4
NUP50-207ENST00000424634 CYTL1Q9NRR1 136 aa12.54□□□□□ -0.4
NUP50-207ENST00000424634 CTXND1A0A1B0GTU2 59 aa12.53□□□□□ -0.4
NUP50-207ENST00000424634 FGF8P55075 233 aaPredicted RBP12.53□□□□□ -0.4
NUP50-207ENST00000424634 CFAP126Q5VTH2 177 aa12.53□□□□□ -0.4
NUP50-207ENST00000424634 TXNDC17Q9BRA2 123 aa12.53□□□□□ -0.4
NUP50-207ENST00000424634 PGPEP1LA6NFU8 196 aa12.52□□□□□ -0.41
NUP50-207ENST00000424634 RS1O15537 224 aa12.52□□□□□ -0.41
NUP50-207ENST00000424634 RNASE3P12724 160 aaKnown RBP12.52□□□□□ -0.41
NUP50-207ENST00000424634 UBE2G2P60604 165 aa12.52□□□□□ -0.41
NUP50-207ENST00000424634 RGS21Q2M5E4 152 aa12.52□□□□□ -0.41
NUP50-207ENST00000424634 SAPCD1Q5SSQ6 148 aa12.52□□□□□ -0.41
NUP50-207ENST00000424634 LY96Q9Y6Y9 160 aa12.52□□□□□ -0.41
NUP50-207ENST00000424634 IGKV3D-20A0A0C4DH25 116 aa12.51□□□□□ -0.41
NUP50-207ENST00000424634 FBLL1A6NHQ2 334 aaKnown RBP12.51□□□□□ -0.41
NUP50-207ENST00000424634 SLC25A29Q8N8R3 303 aa12.51□□□□□ -0.41
NUP50-207ENST00000424634 IGHV3-73A0A0B4J1V6 119 aa12.5□□□□□ -0.41
NUP50-207ENST00000424634 FAM74A7A6NL05 159 aa12.5□□□□□ -0.41
NUP50-207ENST00000424634 SMLR1H3BR10 107 aa12.5□□□□□ -0.41
NUP50-207ENST00000424634 ARPC5O15511 151 aa12.5□□□□□ -0.41
NUP50-207ENST00000424634 IFNA7P01567 189 aa12.5□□□□□ -0.41
NUP50-207ENST00000424634 DNAH10OSP0CZ25 163 aa12.5□□□□□ -0.41
NUP50-207ENST00000424634 FUSP35637 526 aaKnown RBP eCLIP12.5□□□□□ -0.41
NUP50-207ENST00000424634 ZFP69Q49AA0 526 aa12.5□□□□□ -0.41
NUP50-207ENST00000424634 ZNF506Q5JVG8 444 aa12.5□□□□□ -0.41
NUP50-207ENST00000424634 PTH2Q96A98 100 aa12.5□□□□□ -0.41
NUP50-207ENST00000424634 ARL2-SNX15V9GYD0 113 aa12.5□□□□□ -0.41
NUP50-207ENST00000424634 TRAV9-2A0A087WT02 112 aa12.49□□□□□ -0.41
NUP50-207ENST00000424634 AKR1C8PQ5T2L2 129 aa12.49□□□□□ -0.41
NUP50-207ENST00000424634 NHLRC2Q8NBF2 726 aa12.49□□□□□ -0.41
NUP50-207ENST00000424634 PEX7O00628 323 aa12.48□□□□□ -0.41
NUP50-207ENST00000424634 CRIP1P50238 77 aa12.48□□□□□ -0.41
NUP50-207ENST00000424634 TIRAPP58753 221 aa12.48□□□□□ -0.41
NUP50-207ENST00000424634 SH2D6Q7Z4S9 175 aa12.48□□□□□ -0.41
NUP50-207ENST00000424634 TRBV6-4A0A1B0GX49 114 aa12.47□□□□□ -0.41
NUP50-207ENST00000424634 FABP5P3A8MUU1 101 aa12.47□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 63.6 ms