RNA–Protein interactions for RNA: ENST00000424011.6

CMTM3-202, Transcript of CKLF like MARVEL transmembrane domain containing 3, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CMTM3, Length 2,330 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3-202ENST00000424011 CREBBPQ92793 2442 aa12.69□□□□□ -0.38
CMTM3-202ENST00000424011 IGHG4P01861 327 aa12.68□□□□□ -0.38
CMTM3-202ENST00000424011 OR5AL1P0C617 328 aa12.68□□□□□ -0.38
CMTM3-202ENST00000424011 IGFL4Q6B9Z1 124 aa12.68□□□□□ -0.38
CMTM3-202ENST00000424011 SPCS1Q9Y6A9 102 aa12.68□□□□□ -0.38
CMTM3-202ENST00000424011 TMEM189A5PLL7 270 aa12.68□□□□□ -0.38
CMTM3-202ENST00000424011 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa12.68□□□□□ -0.38
CMTM3-202ENST00000424011 IGKV2-40A0A087WW87 121 aaPredicted RBP12.67□□□□□ -0.38
CMTM3-202ENST00000424011 IGHV3-66A0A0C4DH42 116 aa12.67□□□□□ -0.38
CMTM3-202ENST00000424011 TEX48A0A1B0GUV7 120 aa12.67□□□□□ -0.38
CMTM3-202ENST00000424011 A0A1W2PPM0 123 aa12.67□□□□□ -0.38
CMTM3-202ENST00000424011 IGKV2D-40P01614 121 aaPredicted RBP12.67□□□□□ -0.38
CMTM3-202ENST00000424011 HLA-DMBP28068 263 aa12.67□□□□□ -0.38
CMTM3-202ENST00000424011 CKS1BP61024 79 aa12.67□□□□□ -0.38
CMTM3-202ENST00000424011 RPL24P83731 157 aaKnown RBP12.67□□□□□ -0.38
CMTM3-202ENST00000424011 KIR3DS1Q14943 382 aa12.67□□□□□ -0.38
CMTM3-202ENST00000424011 NAA38Q9BRA0 125 aaKnown RBP12.67□□□□□ -0.38
CMTM3-202ENST00000424011 CCDC168Q8NDH2 2452 aa12.67□□□□□ -0.38
CMTM3-202ENST00000424011 ZNF207O43670 478 aaKnown RBP12.67□□□□□ -0.38
CMTM3-202ENST00000424011 IGHV3-11P01762 117 aa12.67□□□□□ -0.38
CMTM3-202ENST00000424011 APOHP02749 345 aaPredicted RBP12.67□□□□□ -0.38
CMTM3-202ENST00000424011 CD300EQ496F6 205 aaPredicted RBP12.67□□□□□ -0.38
CMTM3-202ENST00000424011 LINC01545Q5VT33 79 aa12.67□□□□□ -0.38
CMTM3-202ENST00000424011 COX8CQ7Z4L0 72 aa12.67□□□□□ -0.38
CMTM3-202ENST00000424011 MRPL53Q96EL3 112 aaKnown RBP12.67□□□□□ -0.38
CMTM3-202ENST00000424011 CSPG4Q6UVK1 2322 aa12.67□□□□□ -0.38
CMTM3-202ENST00000424011 TRAV26-1A0A087WT03 109 aa12.66□□□□□ -0.38
CMTM3-202ENST00000424011 RBAKDNA6NC62 111 aa12.66□□□□□ -0.38
CMTM3-202ENST00000424011 TRBV12-3P01733 135 aa12.66□□□□□ -0.38
CMTM3-202ENST00000424011 PSMB8P28062 276 aa12.66□□□□□ -0.38
CMTM3-202ENST00000424011 CRYBA4P53673 196 aa12.66□□□□□ -0.38
CMTM3-202ENST00000424011 GAGE12HA6NDE8 117 aa12.66□□□□□ -0.38
CMTM3-202ENST00000424011 SNAI2O43623 268 aa12.66□□□□□ -0.38
CMTM3-202ENST00000424011 FOXA3P55318 350 aaPredicted RBP12.66□□□□□ -0.38
CMTM3-202ENST00000424011 NDFIP1Q9BT67 221 aa12.66□□□□□ -0.38
CMTM3-202ENST00000424011 HECTD1Q9ULT8 2610 aa12.65□□□□□ -0.38
CMTM3-202ENST00000424011 MCRIP2Q9BUT9 160 aaKnown RBP12.65□□□□□ -0.38
CMTM3-202ENST00000424011 IGHV3OR16-13A0A075B7E8 117 aa12.65□□□□□ -0.39
CMTM3-202ENST00000424011 IGHV3-49A0A0A0MS15 119 aa12.65□□□□□ -0.39
CMTM3-202ENST00000424011 IGHV3-74A0A0B4J1X5 117 aa12.65□□□□□ -0.39
CMTM3-202ENST00000424011 FGF6P10767 208 aa12.65□□□□□ -0.39
CMTM3-202ENST00000424011 TCTEX1D4Q5JR98 221 aa12.65□□□□□ -0.39
CMTM3-202ENST00000424011 GLMPQ8WWB7 406 aa12.65□□□□□ -0.39
CMTM3-202ENST00000424011 PRR25Q96S07 402 aa12.65□□□□□ -0.39
CMTM3-202ENST00000424011 HSPB8Q9UJY1 196 aa12.65□□□□□ -0.39
CMTM3-202ENST00000424011 HOXA3O43365 443 aaPredicted RBP12.64□□□□□ -0.39
CMTM3-202ENST00000424011 UNQ9165/PRO28630Q6UXU0 137 aa12.64□□□□□ -0.39
CMTM3-202ENST00000424011 C8orf86Q6ZUL3 223 aa12.64□□□□□ -0.39
CMTM3-202ENST00000424011 TSSC4Q9Y5U2 329 aaPredicted RBP12.64□□□□□ -0.39
CMTM3-202ENST00000424011 AKAP9Q99996 3911 aa12.64□□□□□ -0.39
CMTM3-202ENST00000424011 ITPR3Q14573 2671 aa12.64□□□□□ -0.39
CMTM3-202ENST00000424011 HAX1O00165 279 aa12.63□□□□□ -0.39
CMTM3-202ENST00000424011 TMEM95Q3KNT9 176 aa12.63□□□□□ -0.39
CMTM3-202ENST00000424011 Q6AWC8 147 aa12.63□□□□□ -0.39
CMTM3-202ENST00000424011 VGLL1Q99990 258 aa12.63□□□□□ -0.39
CMTM3-202ENST00000424011 ARMS2P0C7Q2 107 aa12.63□□□□□ -0.39
CMTM3-202ENST00000424011 FABP2P12104 132 aa12.63□□□□□ -0.39
CMTM3-202ENST00000424011 FAM106AQ4KMX7 169 aa12.63□□□□□ -0.39
CMTM3-202ENST00000424011 FA2HQ7L5A8 372 aa12.63□□□□□ -0.39
CMTM3-202ENST00000424011 DPF1Q92782 380 aa12.63□□□□□ -0.39
CMTM3-202ENST00000424011 SPATA25Q9BR10 227 aa12.63□□□□□ -0.39
CMTM3-202ENST00000424011 TEX15Q9BXT5 2789 aa12.63□□□□□ -0.39
CMTM3-202ENST00000424011 H0Y8G0 127 aa12.62□□□□□ -0.39
CMTM3-202ENST00000424011 SMAD7O15105 426 aaKnown RBP12.62□□□□□ -0.39
CMTM3-202ENST00000424011 Q8TAT8 98 aa12.62□□□□□ -0.39
CMTM3-202ENST00000424011 RAB37Q96AX2 223 aa12.62□□□□□ -0.39
CMTM3-202ENST00000424011 SH2D1AO60880 128 aa12.62□□□□□ -0.39
CMTM3-202ENST00000424011 LCNL1Q6ZST4 164 aa12.62□□□□□ -0.39
CMTM3-202ENST00000424011 DAZ1Q9NQZ3 744 aaKnown RBP12.62□□□□□ -0.39
CMTM3-202ENST00000424011 A0A1B0GUT8 65 aa12.61□□□□□ -0.39
CMTM3-202ENST00000424011 K7EMT4 169 aa12.61□□□□□ -0.39
CMTM3-202ENST00000424011 ELANEP08246 267 aa12.61□□□□□ -0.39
CMTM3-202ENST00000424011 C16orf92Q96LL3 132 aa12.61□□□□□ -0.39
CMTM3-202ENST00000424011 FOXI2Q6ZQN5 318 aa12.61□□□□□ -0.39
CMTM3-202ENST00000424011 GPHB5Q86YW7 130 aa12.61□□□□□ -0.39
CMTM3-202ENST00000424011 RNF182Q8N6D2 247 aa12.61□□□□□ -0.39
CMTM3-202ENST00000424011 ZNF702PQ9H963 129 aa12.61□□□□□ -0.39
CMTM3-202ENST00000424011 TRAV8-2A0A0B4J237 113 aa12.6□□□□□ -0.39
CMTM3-202ENST00000424011 PRAC2D3DTV9 90 aa12.6□□□□□ -0.39
CMTM3-202ENST00000424011 TMSB15BA0A087X1C1 80 aa12.6□□□□□ -0.39
CMTM3-202ENST00000424011 IGHV7-4-1A0A0J9YVY3 117 aa12.6□□□□□ -0.39
CMTM3-202ENST00000424011 J3QR89 54 aa12.6□□□□□ -0.39
CMTM3-202ENST00000424011 ZNF80P51504 273 aaPredicted RBP12.6□□□□□ -0.39
CMTM3-202ENST00000424011 TPPP3Q9BW30 176 aa12.6□□□□□ -0.39
CMTM3-202ENST00000424011 A0A1B0GW15 77 aa12.59□□□□□ -0.39
CMTM3-202ENST00000424011 ERCC8Q13216 396 aa12.59□□□□□ -0.39
CMTM3-202ENST00000424011 RIGQ13278 110 aa12.59□□□□□ -0.39
CMTM3-202ENST00000424011 BOD1L2Q8IYS8 172 aa12.59□□□□□ -0.39
CMTM3-202ENST00000424011 TMEM86BQ8N661 226 aa12.59□□□□□ -0.39
CMTM3-202ENST00000424011 OR9G4Q8NGQ1 327 aa12.59□□□□□ -0.39
CMTM3-202ENST00000424011 MRAP2Q96G30 205 aa12.59□□□□□ -0.39
CMTM3-202ENST00000424011 UFC1Q9Y3C8 167 aa12.59□□□□□ -0.39
CMTM3-202ENST00000424011 SIVA1O15304 175 aa12.59□□□□□ -0.39
CMTM3-202ENST00000424011 TMEM78Q5T7P6 136 aa12.59□□□□□ -0.39
CMTM3-202ENST00000424011 SAMD5Q5TGI4 173 aa12.59□□□□□ -0.39
CMTM3-202ENST00000424011 ADAMTSL5Q6ZMM2 481 aa12.59□□□□□ -0.39
CMTM3-202ENST00000424011 SRSF2Q01130 221 aaKnown RBP12.58□□□□□ -0.4
CMTM3-202ENST00000424011 Q8N2B8 174 aa12.57□□□□□ -0.4
CMTM3-202ENST00000424011 GATD1Q8NB37 220 aa12.57□□□□□ -0.4
CMTM3-202ENST00000424011 RHPN1-AS1Q9BWJ2 59 aa12.57□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 113.4 ms