RNA–Protein interactions for RNA: ENST00000420121.5

SSBP3-206, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 3

Gene SSBP3, Length 593 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-206ENST00000420121 TMEM183AQ8IXX5 376 aa7.56□□□□□ -1.2
SSBP3-206ENST00000420121 HSD17B11Q8NBQ5 300 aa7.56□□□□□ -1.2
SSBP3-206ENST00000420121 OR10G4Q8NGN3 311 aa7.56□□□□□ -1.2
SSBP3-206ENST00000420121 OR10G9Q8NGN4 311 aa7.56□□□□□ -1.2
SSBP3-206ENST00000420121 OR10G7Q8NGN6 311 aa7.56□□□□□ -1.2
SSBP3-206ENST00000420121 RASL10AQ92737 203 aa7.56□□□□□ -1.2
SSBP3-206ENST00000420121 ZNF479Q96JC4 524 aa7.56□□□□□ -1.2
SSBP3-206ENST00000420121 PRO0255Q9UI72 69 aa7.56□□□□□ -1.2
SSBP3-206ENST00000420121 A0A1W2PPV4 95 aa7.55□□□□□ -1.2
SSBP3-206ENST00000420121 GNRH2O43555 120 aa7.55□□□□□ -1.2
SSBP3-206ENST00000420121 SFTA3P0C7M3 94 aa7.55□□□□□ -1.2
SSBP3-206ENST00000420121 CDC34P49427 236 aaPredicted RBP7.55□□□□□ -1.2
SSBP3-206ENST00000420121 C8orf49Q96NF6 230 aa7.55□□□□□ -1.2
SSBP3-206ENST00000420121 SPXQ9BT56 116 aa7.55□□□□□ -1.2
SSBP3-206ENST00000420121 PSMG3Q9BT73 122 aaPredicted RBP7.55□□□□□ -1.2
SSBP3-206ENST00000420121 RPH3ALQ9UNE2 315 aa7.55□□□□□ -1.2
SSBP3-206ENST00000420121 HHLA3Q9XRX5 114 aa7.55□□□□□ -1.2
SSBP3-206ENST00000420121 ICOSQ9Y6W8 199 aa7.55□□□□□ -1.2
SSBP3-206ENST00000420121 TRGV11A0A075B6L2 103 aa7.54□□□□□ -1.2
SSBP3-206ENST00000420121 IGHV3-16A0A0C4DH30 117 aa7.54□□□□□ -1.2
SSBP3-206ENST00000420121 RNF222A6NCQ9 220 aa7.54□□□□□ -1.2
SSBP3-206ENST00000420121 F6UZH7 168 aa7.54□□□□□ -1.2
SSBP3-206ENST00000420121 TYMSP04818 313 aa7.54□□□□□ -1.2
SSBP3-206ENST00000420121 S100A1P23297 94 aa7.54□□□□□ -1.2
SSBP3-206ENST00000420121 LINC00315P59091 139 aa7.54□□□□□ -1.2
SSBP3-206ENST00000420121 FAM159AQ6UWV7 190 aa7.54□□□□□ -1.2
SSBP3-206ENST00000420121 CMTM2Q8TAZ6 248 aa7.54□□□□□ -1.2
SSBP3-206ENST00000420121 RAB24Q969Q5 203 aa7.54□□□□□ -1.2
SSBP3-206ENST00000420121 MED28Q9H204 178 aa7.54□□□□□ -1.2
SSBP3-206ENST00000420121 SH3BGRL3Q9H299 93 aa7.54□□□□□ -1.2
SSBP3-206ENST00000420121 C11orf21Q9P2W6 132 aa7.54□□□□□ -1.2
SSBP3-206ENST00000420121 C16orf90A8MZG2 172 aa7.53□□□□□ -1.2
SSBP3-206ENST00000420121 GGTLC3B5MD39 225 aa7.53□□□□□ -1.2
SSBP3-206ENST00000420121 G3V3Q6 166 aa7.53□□□□□ -1.2
SSBP3-206ENST00000420121 K7EQD1 137 aa7.53□□□□□ -1.2
SSBP3-206ENST00000420121 SIVA1O15304 175 aa7.53□□□□□ -1.2
SSBP3-206ENST00000420121 NXPH4O95158 308 aa7.53□□□□□ -1.2
SSBP3-206ENST00000420121 IGLV2-11P01706 119 aa7.53□□□□□ -1.2
SSBP3-206ENST00000420121 GIPP09681 153 aaPredicted RBP7.53□□□□□ -1.2
SSBP3-206ENST00000420121 GCHFRP30047 84 aa7.53□□□□□ -1.2
SSBP3-206ENST00000420121 ZNF80P51504 273 aaPredicted RBP7.53□□□□□ -1.2
SSBP3-206ENST00000420121 KRTAP10-2P60368 255 aa7.53□□□□□ -1.2
SSBP3-206ENST00000420121 SLAQ13239 276 aa7.53□□□□□ -1.2
SSBP3-206ENST00000420121 FAM74A1Q5RGS3 127 aa7.53□□□□□ -1.2
SSBP3-206ENST00000420121 LYPD5Q6UWN5 251 aa7.53□□□□□ -1.2
SSBP3-206ENST00000420121 SGK494Q96LW2 274 aa7.53□□□□□ -1.2
SSBP3-206ENST00000420121 TREM1Q9NP99 234 aa7.53□□□□□ -1.2
SSBP3-206ENST00000420121 ABCA13Q86UQ4 5058 aa7.53□□□□□ -1.2
SSBP3-206ENST00000420121 TRAV4A0A0B4J268 109 aa7.52□□□□□ -1.21
SSBP3-206ENST00000420121 TRAV21A0A0B4J279 112 aa7.52□□□□□ -1.21
SSBP3-206ENST00000420121 TCRAP04437 139 aa7.52□□□□□ -1.21
SSBP3-206ENST00000420121 SERF2P84101 59 aa7.52□□□□□ -1.21
SSBP3-206ENST00000420121 ZNF726P1Q15940 193 aa7.52□□□□□ -1.21
SSBP3-206ENST00000420121 MRPL23Q16540 153 aaKnown RBP7.52□□□□□ -1.21
SSBP3-206ENST00000420121 RPL7L1Q6DKI1 246 aaKnown RBP7.52□□□□□ -1.21
SSBP3-206ENST00000420121 SPATA12Q7Z6I5 190 aa7.52□□□□□ -1.21
SSBP3-206ENST00000420121 C5orf17Q8NAS9 161 aa7.52□□□□□ -1.21
SSBP3-206ENST00000420121 NAGKQ9UJ70 344 aa7.52□□□□□ -1.21
SSBP3-206ENST00000420121 TRGV4A0A0C4DH28 118 aa7.51□□□□□ -1.21
SSBP3-206ENST00000420121 FAM229AH3BQW9 127 aa7.51□□□□□ -1.21
SSBP3-206ENST00000420121 M0R2P5 195 aa7.51□□□□□ -1.21
SSBP3-206ENST00000420121 CDK2AP2O75956 126 aa7.51□□□□□ -1.21
SSBP3-206ENST00000420121 NEGR1Q7Z3B1 354 aa7.51□□□□□ -1.21
SSBP3-206ENST00000420121 MRPL18Q9H0U6 180 aaKnown RBP7.51□□□□□ -1.21
SSBP3-206ENST00000420121 TNFSF18Q9UNG2 199 aa7.51□□□□□ -1.21
SSBP3-206ENST00000420121 TNFRSF18Q9Y5U5 241 aa7.51□□□□□ -1.21
SSBP3-206ENST00000420121 LOC100131303A0A0U1RQF7 123 aa7.5□□□□□ -1.21
SSBP3-206ENST00000420121 SERTM2A0A1B0GWG4 89 aa7.5□□□□□ -1.21
SSBP3-206ENST00000420121 MBP02144 154 aa7.5□□□□□ -1.21
SSBP3-206ENST00000420121 GYPEP15421 78 aa7.5□□□□□ -1.21
SSBP3-206ENST00000420121 DPPA3Q6W0C5 159 aa7.5□□□□□ -1.21
SSBP3-206ENST00000420121 WFDC10BQ8IUB3 73 aa7.5□□□□□ -1.21
SSBP3-206ENST00000420121 TMEM75Q8N9X5 138 aa7.5□□□□□ -1.21
SSBP3-206ENST00000420121 ASB13Q8WXK3 278 aa7.5□□□□□ -1.21
SSBP3-206ENST00000420121 PSG8Q9UQ74 426 aa7.5□□□□□ -1.21
SSBP3-206ENST00000420121 CXorf1O96002 111 aa7.49□□□□□ -1.21
SSBP3-206ENST00000420121 GATA1P15976 413 aaPredicted RBP7.49□□□□□ -1.21
SSBP3-206ENST00000420121 SRIP30626 198 aa7.49□□□□□ -1.21
SSBP3-206ENST00000420121 FLI1Q01543 452 aaPredicted RBP7.49□□□□□ -1.21
SSBP3-206ENST00000420121 OR4C5Q8NGB2 326 aa7.49□□□□□ -1.21
SSBP3-206ENST00000420121 KCNS1Q96KK3 526 aa7.49□□□□□ -1.21
SSBP3-206ENST00000420121 C9orf85Q96MD7 179 aa7.49□□□□□ -1.21
SSBP3-206ENST00000420121 ACTR3CQ9C0K3 210 aaPredicted RBP7.49□□□□□ -1.21
SSBP3-206ENST00000420121 SDF2L1Q9HCN8 221 aa7.49□□□□□ -1.21
SSBP3-206ENST00000420121 TMEM167BQ9NRX6 74 aa7.49□□□□□ -1.21
SSBP3-206ENST00000420121 EPDR1Q9UM22 224 aa7.49□□□□□ -1.21
SSBP3-206ENST00000420121 FXYD6-FXYD2A0A087WZ82 144 aa7.48□□□□□ -1.21
SSBP3-206ENST00000420121 GCGP01275 180 aa7.48□□□□□ -1.21
SSBP3-206ENST00000420121 ORM1P02763 201 aa7.48□□□□□ -1.21
SSBP3-206ENST00000420121 RNASE3P12724 160 aaKnown RBP7.48□□□□□ -1.21
SSBP3-206ENST00000420121 CYB561D1Q8N8Q1 229 aa7.48□□□□□ -1.21
SSBP3-206ENST00000420121 OR2T35Q8NGX2 323 aa7.48□□□□□ -1.21
SSBP3-206ENST00000420121 LINC00479Q96M42 142 aa7.48□□□□□ -1.21
SSBP3-206ENST00000420121 CYTL1Q9NRR1 136 aa7.48□□□□□ -1.21
SSBP3-206ENST00000420121 CTXND1A0A1B0GTU2 59 aa7.47□□□□□ -1.21
SSBP3-206ENST00000420121 A0A1W2PRE2 83 aa7.47□□□□□ -1.21
SSBP3-206ENST00000420121 PGPEP1LA6NFU8 196 aa7.47□□□□□ -1.21
SSBP3-206ENST00000420121 C9JCJ5 164 aa7.47□□□□□ -1.21
SSBP3-206ENST00000420121 RS1O15537 224 aa7.47□□□□□ -1.21
SSBP3-206ENST00000420121 PFN1P07737 140 aaKnown RBP7.47□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 143.2 ms