RNA–Protein interactions for RNA: ENST00000417285.6

VEGFA-208, Transcript of vascular endothelial growth factor A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VEGFA, Length 1,081 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-208ENST00000417285 K7EQM0 130 aa17.4■□□□□ 0.38
VEGFA-208ENST00000417285 RGS21Q2M5E4 152 aa17.4■□□□□ 0.38
VEGFA-208ENST00000417285 RPL7L1Q6DKI1 246 aaKnown RBP17.4■□□□□ 0.38
VEGFA-208ENST00000417285 TVP23CQ96ET8 276 aa17.4■□□□□ 0.38
VEGFA-208ENST00000417285 C8orf49Q96NF6 230 aa17.4■□□□□ 0.38
VEGFA-208ENST00000417285 RYR1P21817 5038 aa17.4■□□□□ 0.38
VEGFA-208ENST00000417285 TRGV4A0A0C4DH28 118 aa17.39■□□□□ 0.37
VEGFA-208ENST00000417285 TCRAP04437 139 aa17.39■□□□□ 0.37
VEGFA-208ENST00000417285 KCNS1Q96KK3 526 aa17.38■□□□□ 0.37
VEGFA-208ENST00000417285 SDF2L1Q9HCN8 221 aa17.38■□□□□ 0.37
VEGFA-208ENST00000417285 NXPH4O95158 308 aa17.37■□□□□ 0.37
VEGFA-208ENST00000417285 LYPD5Q6UWN5 251 aa17.37■□□□□ 0.37
VEGFA-208ENST00000417285 NEGR1Q7Z3B1 354 aa17.37■□□□□ 0.37
VEGFA-208ENST00000417285 SPATA12Q7Z6I5 190 aa17.37■□□□□ 0.37
VEGFA-208ENST00000417285 SGK494Q96LW2 274 aa17.37■□□□□ 0.37
VEGFA-208ENST00000417285 IGHV3-16A0A0C4DH30 117 aa17.36■□□□□ 0.37
VEGFA-208ENST00000417285 GNRH2O43555 120 aa17.36■□□□□ 0.37
VEGFA-208ENST00000417285 SUMO1P63165 101 aaKnown RBP17.36■□□□□ 0.37
VEGFA-208ENST00000417285 ZNF479Q96JC4 524 aa17.36■□□□□ 0.37
VEGFA-208ENST00000417285 M0R2P5 195 aa17.35■□□□□ 0.37
VEGFA-208ENST00000417285 TYMSP04818 313 aa17.35■□□□□ 0.37
VEGFA-208ENST00000417285 SFTA3P0C7M3 94 aa17.35■□□□□ 0.37
VEGFA-208ENST00000417285 EPDR1Q9UM22 224 aa17.35■□□□□ 0.37
VEGFA-208ENST00000417285 PSG8Q9UQ74 426 aa17.35■□□□□ 0.37
VEGFA-208ENST00000417285 TRAV4A0A0B4J268 109 aa17.34■□□□□ 0.37
VEGFA-208ENST00000417285 GGTLC3B5MD39 225 aa17.34■□□□□ 0.37
VEGFA-208ENST00000417285 ORM1P02763 201 aa17.34■□□□□ 0.37
VEGFA-208ENST00000417285 TRAV9-2A0A087WT02 112 aa17.33■□□□□ 0.36
VEGFA-208ENST00000417285 CTXND1A0A1B0GTU2 59 aa17.33■□□□□ 0.36
VEGFA-208ENST00000417285 A0A1W2PRE2 83 aa17.33■□□□□ 0.36
VEGFA-208ENST00000417285 FBLL1A6NHQ2 334 aaKnown RBP17.33■□□□□ 0.36
VEGFA-208ENST00000417285 LINC00315P59091 139 aa17.33■□□□□ 0.36
VEGFA-208ENST00000417285 FLI1Q01543 452 aaPredicted RBP17.33■□□□□ 0.36
VEGFA-208ENST00000417285 ZFP69Q49AA0 526 aa17.33■□□□□ 0.36
VEGFA-208ENST00000417285 CYB561D1Q8N8Q1 229 aa17.33■□□□□ 0.36
VEGFA-208ENST00000417285 PCNPQ8WW12 178 aaKnown RBP17.33■□□□□ 0.36
VEGFA-208ENST00000417285 TAAR5O14804 337 aa17.32■□□□□ 0.36
VEGFA-208ENST00000417285 SRIP30626 198 aa17.32■□□□□ 0.36
VEGFA-208ENST00000417285 TMEM75Q8N9X5 138 aa17.32■□□□□ 0.36
VEGFA-208ENST00000417285 OR4C5Q8NGB2 326 aa17.32■□□□□ 0.36
VEGFA-208ENST00000417285 K7EP13 123 aa17.31■□□□□ 0.36
VEGFA-208ENST00000417285 K7EQD1 137 aa17.31■□□□□ 0.36
VEGFA-208ENST00000417285 SMUG1Q53HV7 270 aa17.31■□□□□ 0.36
VEGFA-208ENST00000417285 AKR1C8PQ5T2L2 129 aa17.31■□□□□ 0.36
VEGFA-208ENST00000417285 PRNTQ86SH4 94 aa17.31■□□□□ 0.36
VEGFA-208ENST00000417285 G3V3Q6 166 aa17.3■□□□□ 0.36
VEGFA-208ENST00000417285 GCGP01275 180 aa17.3■□□□□ 0.36
VEGFA-208ENST00000417285 IGLV2-11P01706 119 aa17.3■□□□□ 0.36
VEGFA-208ENST00000417285 ZNF726P1Q15940 193 aa17.3■□□□□ 0.36
VEGFA-208ENST00000417285 NFE4Q86UQ8 179 aa17.3■□□□□ 0.36
VEGFA-208ENST00000417285 TXNDC17Q9BRA2 123 aa17.3■□□□□ 0.36
VEGFA-208ENST00000417285 ARPC5O15511 151 aa17.29■□□□□ 0.36
VEGFA-208ENST00000417285 PFN1P07737 140 aaKnown RBP17.29■□□□□ 0.36
VEGFA-208ENST00000417285 GYPEP15421 78 aa17.29■□□□□ 0.36
VEGFA-208ENST00000417285 ZNF80P51504 273 aaPredicted RBP17.29■□□□□ 0.36
VEGFA-208ENST00000417285 SAPCD1Q5SSQ6 148 aa17.29■□□□□ 0.36
VEGFA-208ENST00000417285 Q6ZRN7 208 aaPredicted RBP17.29■□□□□ 0.36
VEGFA-208ENST00000417285 LRP1BQ9NZR2 4599 aa17.28■□□□□ 0.36
VEGFA-208ENST00000417285 C9JCJ5 164 aa17.28■□□□□ 0.36
VEGFA-208ENST00000417285 SH2D6Q7Z4S9 175 aa17.28■□□□□ 0.36
VEGFA-208ENST00000417285 LY96Q9Y6Y9 160 aa17.28■□□□□ 0.36
VEGFA-208ENST00000417285 HSPG2P98160 4391 aa17.27■□□□□ 0.36
VEGFA-208ENST00000417285 EREGO14944 169 aa17.27■□□□□ 0.36
VEGFA-208ENST00000417285 IFNA7P01567 189 aa17.27■□□□□ 0.36
VEGFA-208ENST00000417285 KRTAP10-2P60368 255 aa17.27■□□□□ 0.36
VEGFA-208ENST00000417285 NKX6-2Q9C056 277 aaPredicted RBP17.27■□□□□ 0.36
VEGFA-208ENST00000417285 PGPEP1Q9NXJ5 209 aa17.27■□□□□ 0.36
VEGFA-208ENST00000417285 PPT1P50897 306 aa17.26■□□□□ 0.35
VEGFA-208ENST00000417285 UBE2G2P60604 165 aa17.26■□□□□ 0.35
VEGFA-208ENST00000417285 C11orf21Q9P2W6 132 aa17.26■□□□□ 0.35
VEGFA-208ENST00000417285 ZNF876PQ49A33 203 aa17.25■□□□□ 0.35
VEGFA-208ENST00000417285 MAPKAPK5-AS1Q8N8E1 139 aa17.25■□□□□ 0.35
VEGFA-208ENST00000417285 KRTAP4-5Q9BYR2 181 aa17.25■□□□□ 0.35
VEGFA-208ENST00000417285 ABCA13Q86UQ4 5058 aa17.25■□□□□ 0.35
VEGFA-208ENST00000417285 CIDEAO60543 219 aa17.24■□□□□ 0.35
VEGFA-208ENST00000417285 EVI2AP22794 236 aa17.24■□□□□ 0.35
VEGFA-208ENST00000417285 FGF8P55075 233 aaPredicted RBP17.24■□□□□ 0.35
VEGFA-208ENST00000417285 LINC00479Q96M42 142 aa17.24■□□□□ 0.35
VEGFA-208ENST00000417285 CYTL1Q9NRR1 136 aa17.24■□□□□ 0.35
VEGFA-208ENST00000417285 TRAV34A0A0B4J273 112 aa17.23■□□□□ 0.35
VEGFA-208ENST00000417285 PEX7O00628 323 aa17.23■□□□□ 0.35
VEGFA-208ENST00000417285 ERVFC1-1P60608 527 aa17.23■□□□□ 0.35
VEGFA-208ENST00000417285 ARL2-SNX15V9GYD0 113 aa17.23■□□□□ 0.35
VEGFA-208ENST00000417285 MAP1LC3B2A6NCE7 125 aa17.22■□□□□ 0.35
VEGFA-208ENST00000417285 FAM74A7A6NL05 159 aa17.22■□□□□ 0.35
VEGFA-208ENST00000417285 GATA1P15976 413 aaPredicted RBP17.22■□□□□ 0.35
VEGFA-208ENST00000417285 HIST1H2BAQ96A08 127 aa17.22■□□□□ 0.35
VEGFA-208ENST00000417285 C9orf85Q96MD7 179 aa17.22■□□□□ 0.35
VEGFA-208ENST00000417285 MAP1LC3BQ9GZQ8 125 aa17.22■□□□□ 0.35
VEGFA-208ENST00000417285 SMLR1H3BR10 107 aa17.21■□□□□ 0.35
VEGFA-208ENST00000417285 DNAH10OSP0CZ25 163 aa17.21■□□□□ 0.35
VEGFA-208ENST00000417285 TIRAPP58753 221 aa17.21■□□□□ 0.35
VEGFA-208ENST00000417285 STOML3Q8TAV4 291 aa17.2■□□□□ 0.34
VEGFA-208ENST00000417285 PTH2Q96A98 100 aa17.2■□□□□ 0.34
VEGFA-208ENST00000417285 MSRB1Q9NZV6 116 aa17.2■□□□□ 0.34
VEGFA-208ENST00000417285 BOLA1Q9Y3E2 137 aa17.2■□□□□ 0.34
VEGFA-208ENST00000417285 TNFRSF18Q9Y5U5 241 aa17.2■□□□□ 0.34
VEGFA-208ENST00000417285 RS1O15537 224 aa17.19■□□□□ 0.34
VEGFA-208ENST00000417285 ZNF345Q14585 488 aa17.19■□□□□ 0.34
VEGFA-208ENST00000417285 CFAP126Q5VTH2 177 aa17.19■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 106.2 ms