RNA–Protein interactions for RNA: ENST00000417101.1

ACTB-203, Transcript of actin beta, humanhuman

TSL 4

Gene ACTB, Length 472 nt, Biotype protein coding, Subcellular localisation Cell leading edge, Cytoplasm, Cytosol, Exosome, Lamellipodium, Mitochondria, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTB-203ENST00000417101 M0R2P5 195 aa14.78□□□□□ -0.04
ACTB-203ENST00000417101 HMGB3O15347 200 aaKnown RBP14.78□□□□□ -0.04
ACTB-203ENST00000417101 EVI2AP22794 236 aa14.78□□□□□ -0.04
ACTB-203ENST00000417101 DEFA1P59665 94 aa14.78□□□□□ -0.04
ACTB-203ENST00000417101 DEFA3P59666 94 aa14.78□□□□□ -0.04
ACTB-203ENST00000417101 TVP23CQ96ET8 276 aa14.78□□□□□ -0.04
ACTB-203ENST00000417101 TXNDC17Q9BRA2 123 aa14.78□□□□□ -0.04
ACTB-203ENST00000417101 TREM1Q9NP99 234 aa14.78□□□□□ -0.04
ACTB-203ENST00000417101 MSRB1Q9NZV6 116 aa14.78□□□□□ -0.04
ACTB-203ENST00000417101 A6NHS1 94 aa14.77□□□□□ -0.05
ACTB-203ENST00000417101 GNG5P63218 68 aa14.77□□□□□ -0.05
ACTB-203ENST00000417101 CDPF1Q6NVV7 123 aa14.77□□□□□ -0.05
ACTB-203ENST00000417101 A0A087WTM6 91 aa14.76□□□□□ -0.05
ACTB-203ENST00000417101 LOC100131303A0A0U1RQF7 123 aa14.76□□□□□ -0.05
ACTB-203ENST00000417101 TYMSP04818 313 aa14.76□□□□□ -0.05
ACTB-203ENST00000417101 ARL6IP6Q8N6S5 226 aa14.76□□□□□ -0.05
ACTB-203ENST00000417101 K7EP13 123 aa14.75□□□□□ -0.05
ACTB-203ENST00000417101 OR10G9Q8NGN4 311 aa14.75□□□□□ -0.05
ACTB-203ENST00000417101 OR10G7Q8NGN6 311 aa14.75□□□□□ -0.05
ACTB-203ENST00000417101 SDF2L1Q9HCN8 221 aa14.75□□□□□ -0.05
ACTB-203ENST00000417101 NHLRC2Q8NBF2 726 aa14.74□□□□□ -0.05
ACTB-203ENST00000417101 KCNS1Q96KK3 526 aa14.74□□□□□ -0.05
ACTB-203ENST00000417101 SGK494Q96LW2 274 aa14.74□□□□□ -0.05
ACTB-203ENST00000417101 CRYGDP07320 174 aa14.73□□□□□ -0.05
ACTB-203ENST00000417101 ARL14EPLP0DKL9 152 aa14.73□□□□□ -0.05
ACTB-203ENST00000417101 ASB13Q8WXK3 278 aa14.73□□□□□ -0.05
ACTB-203ENST00000417101 EPM2AB3EWF7 344 aa14.72□□□□□ -0.05
ACTB-203ENST00000417101 GATA1P15976 413 aaPredicted RBP14.72□□□□□ -0.05
ACTB-203ENST00000417101 SH2D6Q7Z4S9 175 aa14.72□□□□□ -0.05
ACTB-203ENST00000417101 CDC34P49427 236 aaPredicted RBP14.71□□□□□ -0.05
ACTB-203ENST00000417101 XGP55808 180 aa14.71□□□□□ -0.05
ACTB-203ENST00000417101 KRTAP10-1P60331 282 aa14.71□□□□□ -0.05
ACTB-203ENST00000417101 NDFIP1Q9BT67 221 aa14.71□□□□□ -0.05
ACTB-203ENST00000417101 PPT1P50897 306 aa14.7□□□□□ -0.06
ACTB-203ENST00000417101 ZNF876PQ49A33 203 aa14.7□□□□□ -0.06
ACTB-203ENST00000417101 C10orf126Q8N4M7 172 aa14.7□□□□□ -0.06
ACTB-203ENST00000417101 HSD17B11Q8NBQ5 300 aa14.7□□□□□ -0.06
ACTB-203ENST00000417101 C11orf21Q9P2W6 132 aa14.7□□□□□ -0.06
ACTB-203ENST00000417101 SERTM2A0A1B0GWG4 89 aa14.69□□□□□ -0.06
ACTB-203ENST00000417101 FBLL1A6NHQ2 334 aaKnown RBP14.69□□□□□ -0.06
ACTB-203ENST00000417101 STAG3L2P0CL84 134 aa14.69□□□□□ -0.06
ACTB-203ENST00000417101 STAG3L3P0CL85 134 aa14.69□□□□□ -0.06
ACTB-203ENST00000417101 ZNF80P51504 273 aaPredicted RBP14.69□□□□□ -0.06
ACTB-203ENST00000417101 TIRAPP58753 221 aa14.69□□□□□ -0.06
ACTB-203ENST00000417101 C5orf17Q8NAS9 161 aa14.69□□□□□ -0.06
ACTB-203ENST00000417101 HERC1Q15751 4861 aa14.69□□□□□ -0.06
ACTB-203ENST00000417101 IGHV3-38A0A0C4DH36 116 aa14.68□□□□□ -0.06
ACTB-203ENST00000417101 TCRAP04437 139 aa14.68□□□□□ -0.06
ACTB-203ENST00000417101 SLC25A29Q8N8R3 303 aa14.68□□□□□ -0.06
ACTB-203ENST00000417101 OR2G3Q8NGZ4 309 aa14.68□□□□□ -0.06
ACTB-203ENST00000417101 RAB24Q969Q5 203 aa14.68□□□□□ -0.06
ACTB-203ENST00000417101 ALG5Q9Y673 324 aa14.68□□□□□ -0.06
ACTB-203ENST00000417101 GCHFRP30047 84 aa14.67□□□□□ -0.06
ACTB-203ENST00000417101 CFAP126Q5VTH2 177 aa14.67□□□□□ -0.06
ACTB-203ENST00000417101 DPPA3Q6W0C5 159 aa14.67□□□□□ -0.06
ACTB-203ENST00000417101 IGHV3-73A0A0B4J1V6 119 aa14.66□□□□□ -0.06
ACTB-203ENST00000417101 K7EQM0 130 aa14.66□□□□□ -0.06
ACTB-203ENST00000417101 TAAR5O14804 337 aa14.66□□□□□ -0.06
ACTB-203ENST00000417101 RS1O15537 224 aa14.66□□□□□ -0.06
ACTB-203ENST00000417101 GCGP01275 180 aa14.66□□□□□ -0.06
ACTB-203ENST00000417101 PFN1P07737 140 aaKnown RBP14.66□□□□□ -0.06
ACTB-203ENST00000417101 TMEM75Q8N9X5 138 aa14.66□□□□□ -0.06
ACTB-203ENST00000417101 SUN5Q8TC36 379 aa14.66□□□□□ -0.06
ACTB-203ENST00000417101 PSG8Q9UQ74 426 aa14.66□□□□□ -0.06
ACTB-203ENST00000417101 PSCAO43653 123 aa14.65□□□□□ -0.06
ACTB-203ENST00000417101 ATP6V0CP27449 155 aa14.65□□□□□ -0.06
ACTB-203ENST00000417101 SUMO1P63165 101 aaKnown RBP14.65□□□□□ -0.06
ACTB-203ENST00000417101 LINC01556Q5JQF7 62 aa14.65□□□□□ -0.06
ACTB-203ENST00000417101 PRADC1Q9BSG0 188 aa14.65□□□□□ -0.06
ACTB-203ENST00000417101 PSMG3Q9BT73 122 aaPredicted RBP14.65□□□□□ -0.06
ACTB-203ENST00000417101 TRAV8-6A0A0B4J262 113 aa14.64□□□□□ -0.07
ACTB-203ENST00000417101 GGTLC3B5MD39 225 aa14.64□□□□□ -0.07
ACTB-203ENST00000417101 IGLV2-11P01706 119 aa14.64□□□□□ -0.07
ACTB-203ENST00000417101 GCSHP23434 173 aa14.64□□□□□ -0.07
ACTB-203ENST00000417101 FLI1Q01543 452 aaPredicted RBP14.64□□□□□ -0.07
ACTB-203ENST00000417101 RHOHQ15669 191 aa14.64□□□□□ -0.07
ACTB-203ENST00000417101 OR10J3Q5JRS4 329 aa14.64□□□□□ -0.07
ACTB-203ENST00000417101 PRNTQ86SH4 94 aa14.64□□□□□ -0.07
ACTB-203ENST00000417101 C9orf85Q96MD7 179 aa14.64□□□□□ -0.07
ACTB-203ENST00000417101 AQP10Q96PS8 301 aa14.64□□□□□ -0.07
ACTB-203ENST00000417101 EPDR1Q9UM22 224 aa14.64□□□□□ -0.07
ACTB-203ENST00000417101 VPS13BQ7Z7G8 4022 aa14.64□□□□□ -0.07
ACTB-203ENST00000417101 TRBV6-4A0A1B0GX49 114 aa14.63□□□□□ -0.07
ACTB-203ENST00000417101 CIDEAO60543 219 aa14.63□□□□□ -0.07
ACTB-203ENST00000417101 MBP02144 154 aa14.63□□□□□ -0.07
ACTB-203ENST00000417101 ZFP69Q49AA0 526 aa14.63□□□□□ -0.07
ACTB-203ENST00000417101 SMUG1Q53HV7 270 aa14.63□□□□□ -0.07
ACTB-203ENST00000417101 SH3BGRL3Q9H299 93 aa14.63□□□□□ -0.07
ACTB-203ENST00000417101 TMEM167BQ9NRX6 74 aa14.63□□□□□ -0.07
ACTB-203ENST00000417101 PGPEP1LA6NFU8 196 aa14.62□□□□□ -0.07
ACTB-203ENST00000417101 IBA57-AS1B1ANH7 110 aa14.62□□□□□ -0.07
ACTB-203ENST00000417101 SERF2P84101 59 aa14.62□□□□□ -0.07
ACTB-203ENST00000417101 ZNF506Q5JVG8 444 aa14.62□□□□□ -0.07
ACTB-203ENST00000417101 CYB561D1Q8N8Q1 229 aa14.62□□□□□ -0.07
ACTB-203ENST00000417101 Q9HAA7 133 aa14.62□□□□□ -0.07
ACTB-203ENST00000417101 LRCOL1A6NCL2 159 aa14.61□□□□□ -0.07
ACTB-203ENST00000417101 CXorf1O96002 111 aa14.61□□□□□ -0.07
ACTB-203ENST00000417101 INAFM2P0DMQ5 153 aa14.61□□□□□ -0.07
ACTB-203ENST00000417101 Q5VSD8 79 aa14.61□□□□□ -0.07
ACTB-203ENST00000417101 FRZBQ92765 325 aa14.61□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 156.9 ms