RNA–Protein interactions for RNA: ENST00000412507.1

TRIM56-202, Transcript of tripartite motif containing 56, humanhuman

APPRIS ALT2 TSL 1 (best)

Gene TRIM56, Length 1,129 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM56-202ENST00000412507 GNRH2O43555 120 aa13.14□□□□□ -0.31
TRIM56-202ENST00000412507 IFNA7P01567 189 aa13.14□□□□□ -0.31
TRIM56-202ENST00000412507 SEC11BP0C7V7 166 aa13.14□□□□□ -0.31
TRIM56-202ENST00000412507 TDRG1Q3Y452 100 aa13.14□□□□□ -0.31
TRIM56-202ENST00000412507 PRNTQ86SH4 94 aa13.14□□□□□ -0.31
TRIM56-202ENST00000412507 TMEM75Q8N9X5 138 aa13.14□□□□□ -0.31
TRIM56-202ENST00000412507 IGHV3-53P01767 116 aa13.13□□□□□ -0.31
TRIM56-202ENST00000412507 TPT1P13693 172 aaKnown RBP13.13□□□□□ -0.31
TRIM56-202ENST00000412507 ZNF80P51504 273 aaPredicted RBP13.13□□□□□ -0.31
TRIM56-202ENST00000412507 STOML3Q8TAV4 291 aa13.13□□□□□ -0.31
TRIM56-202ENST00000412507 LINC00479Q96M42 142 aa13.13□□□□□ -0.31
TRIM56-202ENST00000412507 TRAV34A0A0B4J273 112 aa13.12□□□□□ -0.31
TRIM56-202ENST00000412507 GCGP01275 180 aa13.12□□□□□ -0.31
TRIM56-202ENST00000412507 TYMSP04818 313 aa13.12□□□□□ -0.31
TRIM56-202ENST00000412507 SPXQ9BT56 116 aa13.12□□□□□ -0.31
TRIM56-202ENST00000412507 PEX7O00628 323 aa13.11□□□□□ -0.31
TRIM56-202ENST00000412507 CCL18P55774 89 aa13.11□□□□□ -0.31
TRIM56-202ENST00000412507 SMUG1Q53HV7 270 aa13.11□□□□□ -0.31
TRIM56-202ENST00000412507 EIF5AL1Q6IS14 154 aaKnown RBP13.11□□□□□ -0.31
TRIM56-202ENST00000412507 FAM213BQ8TBF2 198 aa13.11□□□□□ -0.31
TRIM56-202ENST00000412507 VSIG2Q96IQ7 327 aa13.11□□□□□ -0.31
TRIM56-202ENST00000412507 KCNS1Q96KK3 526 aa13.11□□□□□ -0.31
TRIM56-202ENST00000412507 NKX6-2Q9C056 277 aaPredicted RBP13.11□□□□□ -0.31
TRIM56-202ENST00000412507 SDF2L1Q9HCN8 221 aa13.11□□□□□ -0.31
TRIM56-202ENST00000412507 LINC00588Q9Y4M8 146 aa13.11□□□□□ -0.31
TRIM56-202ENST00000412507 IGHV3-16A0A0C4DH30 117 aa13.1□□□□□ -0.31
TRIM56-202ENST00000412507 FBLL1A6NHQ2 334 aaKnown RBP13.1□□□□□ -0.31
TRIM56-202ENST00000412507 H3BNG1 76 aa13.1□□□□□ -0.31
TRIM56-202ENST00000412507 FAM3BP58499 235 aaPredicted RBP13.1□□□□□ -0.31
TRIM56-202ENST00000412507 C11orf21Q9P2W6 132 aa13.1□□□□□ -0.31
TRIM56-202ENST00000412507 BOLA1Q9Y3E2 137 aa13.1□□□□□ -0.31
TRIM56-202ENST00000412507 UMAD1C9J7I0 102 aa13.09□□□□□ -0.31
TRIM56-202ENST00000412507 PFN1P07737 140 aaKnown RBP13.09□□□□□ -0.31
TRIM56-202ENST00000412507 PPT1P50897 306 aa13.09□□□□□ -0.31
TRIM56-202ENST00000412507 SAPCD1Q5SSQ6 148 aa13.09□□□□□ -0.31
TRIM56-202ENST00000412507 SFT2D1Q8WV19 159 aa13.09□□□□□ -0.31
TRIM56-202ENST00000412507 MBD3L1Q8WWY6 194 aa13.09□□□□□ -0.31
TRIM56-202ENST00000412507 HIST1H2BAQ96A08 127 aa13.09□□□□□ -0.31
TRIM56-202ENST00000412507 ARL2-SNX15V9GYD0 113 aa13.09□□□□□ -0.31
TRIM56-202ENST00000412507 A0A1B0GV50 99 aa13.08□□□□□ -0.32
TRIM56-202ENST00000412507 CST9LP1Q5W188 147 aa13.08□□□□□ -0.32
TRIM56-202ENST00000412507 Q6ZR54 194 aa13.08□□□□□ -0.32
TRIM56-202ENST00000412507 ZNRF2Q8NHG8 242 aa13.08□□□□□ -0.32
TRIM56-202ENST00000412507 RASL10AQ92737 203 aa13.08□□□□□ -0.32
TRIM56-202ENST00000412507 SFTA3P0C7M3 94 aa13.07□□□□□ -0.32
TRIM56-202ENST00000412507 FHL2Q14192 279 aa13.07□□□□□ -0.32
TRIM56-202ENST00000412507 Q86TA4 180 aa13.07□□□□□ -0.32
TRIM56-202ENST00000412507 A0A096LPF7 62 aa13.06□□□□□ -0.32
TRIM56-202ENST00000412507 M0R2P5 195 aa13.06□□□□□ -0.32
TRIM56-202ENST00000412507 PAX4O43316 350 aa13.06□□□□□ -0.32
TRIM56-202ENST00000412507 PAGE4O60829 102 aa13.06□□□□□ -0.32
TRIM56-202ENST00000412507 ESRGQ1W209 222 aa13.06□□□□□ -0.32
TRIM56-202ENST00000412507 DPPA3Q6W0C5 159 aa13.06□□□□□ -0.32
TRIM56-202ENST00000412507 ZNF479Q96JC4 524 aa13.06□□□□□ -0.32
TRIM56-202ENST00000412507 PRO0255Q9UI72 69 aa13.06□□□□□ -0.32
TRIM56-202ENST00000412507 HHLA3Q9XRX5 114 aa13.06□□□□□ -0.32
TRIM56-202ENST00000412507 TRGV4A0A0C4DH28 118 aa13.05□□□□□ -0.32
TRIM56-202ENST00000412507 RTL8CO15255 209 aa13.05□□□□□ -0.32
TRIM56-202ENST00000412507 CRYBA4P53673 196 aa13.05□□□□□ -0.32
TRIM56-202ENST00000412507 HECTD4Q9Y4D8 3996 aa13.04□□□□□ -0.32
TRIM56-202ENST00000412507 H2AFB1P0C5Y9 115 aa13.04□□□□□ -0.32
TRIM56-202ENST00000412507 SLAQ13239 276 aa13.04□□□□□ -0.32
TRIM56-202ENST00000412507 FAT2Q9NYQ8 4349 aa13.04□□□□□ -0.32
TRIM56-202ENST00000412507 TRAV4A0A0B4J268 109 aa13.03□□□□□ -0.32
TRIM56-202ENST00000412507 UBE2G1P62253 170 aa13.03□□□□□ -0.32
TRIM56-202ENST00000412507 LINC00336Q6ZUF6 198 aa13.03□□□□□ -0.32
TRIM56-202ENST00000412507 OR4C5Q8NGB2 326 aa13.03□□□□□ -0.32
TRIM56-202ENST00000412507 FMC1Q96HJ9 113 aa13.03□□□□□ -0.32
TRIM56-202ENST00000412507 TCEAL7Q9BRU2 100 aa13.03□□□□□ -0.32
TRIM56-202ENST00000412507 ICOSQ9Y6W8 199 aa13.03□□□□□ -0.32
TRIM56-202ENST00000412507 NBDYA0A0U1RRE5 68 aa13.02□□□□□ -0.33
TRIM56-202ENST00000412507 FABP5P3A8MUU1 101 aa13.02□□□□□ -0.33
TRIM56-202ENST00000412507 C9JCJ5 164 aa13.02□□□□□ -0.33
TRIM56-202ENST00000412507 AKR1C3P42330 323 aa13.02□□□□□ -0.33
TRIM56-202ENST00000412507 RAB5CP51148 216 aa13.02□□□□□ -0.33
TRIM56-202ENST00000412507 ZC2HC1AQ96GY0 325 aa13.02□□□□□ -0.33
TRIM56-202ENST00000412507 C9orf85Q96MD7 179 aa13.02□□□□□ -0.33
TRIM56-202ENST00000412507 ZFP30Q9Y2G7 519 aa13.02□□□□□ -0.33
TRIM56-202ENST00000412507 IGKV3D-20A0A0C4DH25 116 aa13.01□□□□□ -0.33
TRIM56-202ENST00000412507 Q9H8V8 135 aa13.01□□□□□ -0.33
TRIM56-202ENST00000412507 MRPS16Q9Y3D3 137 aaKnown RBP13.01□□□□□ -0.33
TRIM56-202ENST00000412507 TRBV6-1A0A0K0K1D8 114 aa13□□□□□ -0.33
TRIM56-202ENST00000412507 RNASE3P12724 160 aaKnown RBP13□□□□□ -0.33
TRIM56-202ENST00000412507 CRIP1P50238 77 aa13□□□□□ -0.33
TRIM56-202ENST00000412507 ZNF876PQ49A33 203 aa13□□□□□ -0.33
TRIM56-202ENST00000412507 TEX261Q6UWH6 196 aa13□□□□□ -0.33
TRIM56-202ENST00000412507 PGPEP1LA6NFU8 196 aa12.99□□□□□ -0.33
TRIM56-202ENST00000412507 PRSS29PA6NIE9 313 aa12.99□□□□□ -0.33
TRIM56-202ENST00000412507 ORM1P02763 201 aa12.99□□□□□ -0.33
TRIM56-202ENST00000412507 CCL20P78556 96 aa12.99□□□□□ -0.33
TRIM56-202ENST00000412507 MRPL23Q16540 153 aaKnown RBP12.99□□□□□ -0.33
TRIM56-202ENST00000412507 C1orf134Q5TEV5 83 aa12.99□□□□□ -0.33
TRIM56-202ENST00000412507 ALKAL2Q6UX46 152 aa12.99□□□□□ -0.33
TRIM56-202ENST00000412507 COX8CQ7Z4L0 72 aa12.99□□□□□ -0.33
TRIM56-202ENST00000412507 UPK3BQ9BT76 320 aa12.99□□□□□ -0.33
TRIM56-202ENST00000412507 PKD1P98161 4303 aa12.98□□□□□ -0.33
TRIM56-202ENST00000412507 SCO2A0A1W2PP80 73 aa12.98□□□□□ -0.33
TRIM56-202ENST00000412507 B4DEV8 164 aa12.98□□□□□ -0.33
TRIM56-202ENST00000412507 SH2D1AO60880 128 aa12.98□□□□□ -0.33
TRIM56-202ENST00000412507 LTAP01374 205 aa12.98□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 81.6 ms