RNA–Protein interactions for RNA: ENST00000410011.5

LIMS2-208, Transcript of LIM zinc finger domain containing 2, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene LIMS2, Length 2,335 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS2-208ENST00000410011 ORMDL2Q53FV1 153 aa12.69□□□□□ -0.38
LIMS2-208ENST00000410011 APRG1Q8IVJ8 170 aa12.69□□□□□ -0.38
LIMS2-208ENST00000410011 C20orf173Q96LM9 149 aa12.69□□□□□ -0.38
LIMS2-208ENST00000410011 FAM19A4Q96LR4 140 aa12.69□□□□□ -0.38
LIMS2-208ENST00000410011 TRAV26-2A0A0B4J265 109 aa12.68□□□□□ -0.38
LIMS2-208ENST00000410011 FABP2P12104 132 aa12.68□□□□□ -0.38
LIMS2-208ENST00000410011 PRR9Q5T870 116 aa12.68□□□□□ -0.38
LIMS2-208ENST00000410011 NEGR1Q7Z3B1 354 aa12.68□□□□□ -0.38
LIMS2-208ENST00000410011 GPHB5Q86YW7 130 aa12.68□□□□□ -0.38
LIMS2-208ENST00000410011 USMG5Q96IX5 58 aa12.68□□□□□ -0.38
LIMS2-208ENST00000410011 TMEM160Q9NX00 188 aa12.68□□□□□ -0.38
LIMS2-208ENST00000410011 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP12.68□□□□□ -0.38
LIMS2-208ENST00000410011 H3BVH4 76 aa12.68□□□□□ -0.38
LIMS2-208ENST00000410011 FXYD2P54710 66 aa12.68□□□□□ -0.38
LIMS2-208ENST00000410011 SAMD5Q5TGI4 173 aa12.68□□□□□ -0.38
LIMS2-208ENST00000410011 CEND1Q8N111 149 aa12.68□□□□□ -0.38
LIMS2-208ENST00000410011 OR10J6PQ8NGY7 276 aa12.68□□□□□ -0.38
LIMS2-208ENST00000410011 SPCS1Q9Y6A9 102 aa12.68□□□□□ -0.38
LIMS2-208ENST00000410011 IGHV1-69DA0A0B4J2H0 117 aa12.67□□□□□ -0.38
LIMS2-208ENST00000410011 M0R381 172 aa12.67□□□□□ -0.38
LIMS2-208ENST00000410011 IGHV1-69P01742 117 aa12.67□□□□□ -0.38
LIMS2-208ENST00000410011 GCSHP23434 173 aa12.67□□□□□ -0.38
LIMS2-208ENST00000410011 Q6ZQT7 251 aa12.67□□□□□ -0.38
LIMS2-208ENST00000410011 PHLDA1Q8WV24 401 aaPredicted RBP12.67□□□□□ -0.38
LIMS2-208ENST00000410011 RAB37Q96AX2 223 aa12.67□□□□□ -0.38
LIMS2-208ENST00000410011 LINC01619G3V211 115 aa12.67□□□□□ -0.38
LIMS2-208ENST00000410011 H7C1H1 209 aa12.67□□□□□ -0.38
LIMS2-208ENST00000410011 TOMM6Q96B49 74 aa12.67□□□□□ -0.38
LIMS2-208ENST00000410011 F8VRH5 84 aa12.66□□□□□ -0.38
LIMS2-208ENST00000410011 SUMO2P61956 95 aaKnown RBP12.66□□□□□ -0.38
LIMS2-208ENST00000410011 DPH3P1Q9H4G8 78 aa12.66□□□□□ -0.38
LIMS2-208ENST00000410011 PPP1R17O96001 155 aa12.66□□□□□ -0.38
LIMS2-208ENST00000410011 TMEM219Q86XT9 240 aa12.66□□□□□ -0.38
LIMS2-208ENST00000410011 TTTY13Q9BZ97 58 aa12.66□□□□□ -0.38
LIMS2-208ENST00000410011 CSMD1Q96PZ7 3565 aa12.65□□□□□ -0.38
LIMS2-208ENST00000410011 G3V4G9 280 aa12.65□□□□□ -0.38
LIMS2-208ENST00000410011 COTL1Q14019 142 aa12.65□□□□□ -0.38
LIMS2-208ENST00000410011 POM121L12Q8N7R1 296 aa12.65□□□□□ -0.38
LIMS2-208ENST00000410011 RELNP78509 3460 aa12.65□□□□□ -0.39
LIMS2-208ENST00000410011 ASIPP42127 132 aa12.65□□□□□ -0.39
LIMS2-208ENST00000410011 UNQ9165/PRO28630Q6UXU0 137 aa12.65□□□□□ -0.39
LIMS2-208ENST00000410011 RASL10AQ92737 203 aa12.65□□□□□ -0.39
LIMS2-208ENST00000410011 IGHG2P01859 326 aa12.64□□□□□ -0.39
LIMS2-208ENST00000410011 MED13LQ71F56 2210 aa12.64□□□□□ -0.39
LIMS2-208ENST00000410011 NAA38Q9BRA0 125 aaKnown RBP12.63□□□□□ -0.39
LIMS2-208ENST00000410011 MAPKAPK5-AS1Q8N8E1 139 aa12.63□□□□□ -0.39
LIMS2-208ENST00000410011 NEXN-AS1Q8NBZ9 246 aa12.63□□□□□ -0.39
LIMS2-208ENST00000410011 S100A4P26447 101 aaKnown RBP12.62□□□□□ -0.39
LIMS2-208ENST00000410011 TM4SF20Q53R12 229 aa12.62□□□□□ -0.39
LIMS2-208ENST00000410011 CSTL1Q9H114 145 aa12.62□□□□□ -0.39
LIMS2-208ENST00000410011 PHLDA3Q9Y5J5 127 aa12.62□□□□□ -0.39
LIMS2-208ENST00000410011 SAP30O75446 220 aa12.62□□□□□ -0.39
LIMS2-208ENST00000410011 NXPH4O95158 308 aa12.62□□□□□ -0.39
LIMS2-208ENST00000410011 RPL32P62910 135 aaKnown RBP12.62□□□□□ -0.39
LIMS2-208ENST00000410011 SCGB3A1Q96QR1 104 aa12.62□□□□□ -0.39
LIMS2-208ENST00000410011 LINC01549A6NIU2 74 aa12.61□□□□□ -0.39
LIMS2-208ENST00000410011 E9PLD3 99 aa12.61□□□□□ -0.39
LIMS2-208ENST00000410011 TRBV12-3P01733 135 aa12.61□□□□□ -0.39
LIMS2-208ENST00000410011 IGHV4-39P01824 125 aa12.61□□□□□ -0.39
LIMS2-208ENST00000410011 ANXA2RQ3ZCQ2 193 aa12.61□□□□□ -0.39
LIMS2-208ENST00000410011 LINC00527Q9UJ94 153 aa12.61□□□□□ -0.39
LIMS2-208ENST00000410011 CHTOPQ9Y3Y2 248 aaKnown RBP12.61□□□□□ -0.39
LIMS2-208ENST00000410011 RNF223E7ERA6 249 aa12.6□□□□□ -0.39
LIMS2-208ENST00000410011 SPOCK3Q9BQ16 436 aa12.6□□□□□ -0.39
LIMS2-208ENST00000410011 NBASA2RRP1 2371 aa12.6□□□□□ -0.39
LIMS2-208ENST00000410011 IGHV4OR15-8A0A075B7B6 117 aa12.6□□□□□ -0.39
LIMS2-208ENST00000410011 A0A087WW49 117 aa12.6□□□□□ -0.39
LIMS2-208ENST00000410011 A6NDX4 124 aa12.6□□□□□ -0.39
LIMS2-208ENST00000410011 NHP2Q9NX24 153 aaKnown RBP12.6□□□□□ -0.39
LIMS2-208ENST00000410011 RNASE3P12724 160 aaKnown RBP12.59□□□□□ -0.39
LIMS2-208ENST00000410011 SAMD13Q5VXD3 122 aa12.59□□□□□ -0.39
LIMS2-208ENST00000410011 C14orf178Q8N769 122 aaPredicted RBP12.59□□□□□ -0.39
LIMS2-208ENST00000410011 MYMXA0A1B0GTQ4 84 aa12.59□□□□□ -0.39
LIMS2-208ENST00000410011 A0A1B0GWB2 263 aa12.59□□□□□ -0.39
LIMS2-208ENST00000410011 CACNA1BQ00975 2339 aa12.59□□□□□ -0.39
LIMS2-208ENST00000410011 TRBV7-3A0A075B6L6 115 aa12.58□□□□□ -0.4
LIMS2-208ENST00000410011 OR11H12B2RN74 326 aa12.58□□□□□ -0.4
LIMS2-208ENST00000410011 IGLL5B9A064 214 aa12.58□□□□□ -0.4
LIMS2-208ENST00000410011 IGLV1-40P01703 118 aa12.58□□□□□ -0.4
LIMS2-208ENST00000410011 C2orf66Q6UXQ4 117 aa12.58□□□□□ -0.4
LIMS2-208ENST00000410011 OR11H1Q8NG94 326 aa12.58□□□□□ -0.4
LIMS2-208ENST00000410011 OR11H2Q8NH07 326 aa12.58□□□□□ -0.4
LIMS2-208ENST00000410011 KLLNB2CW77 178 aa12.57□□□□□ -0.4
LIMS2-208ENST00000410011 K7EMT4 169 aa12.57□□□□□ -0.4
LIMS2-208ENST00000410011 RNASE4P34096 147 aaKnown RBP12.57□□□□□ -0.4
LIMS2-208ENST00000410011 C12orf74Q32Q52 190 aa12.57□□□□□ -0.4
LIMS2-208ENST00000410011 BRD3OSQ6XYD6 125 aa12.57□□□□□ -0.4
LIMS2-208ENST00000410011 FOXI2Q6ZQN5 318 aa12.57□□□□□ -0.4
LIMS2-208ENST00000410011 RPL39LQ96EH5 51 aaKnown RBP12.57□□□□□ -0.4
LIMS2-208ENST00000410011 PIMREGQ9BSJ6 248 aa12.57□□□□□ -0.4
LIMS2-208ENST00000410011 ZNF580Q9UK33 172 aa12.57□□□□□ -0.4
LIMS2-208ENST00000410011 KIF25-AS1Q9Y6Z4 181 aa12.57□□□□□ -0.4
LIMS2-208ENST00000410011 C19orf84I3L1E1 186 aa12.57□□□□□ -0.4
LIMS2-208ENST00000410011 K7ERJ3 54 aa12.57□□□□□ -0.4
LIMS2-208ENST00000410011 NDUFS8O00217 210 aa12.57□□□□□ -0.4
LIMS2-208ENST00000410011 BAALCQ8WXS3 180 aa12.57□□□□□ -0.4
LIMS2-208ENST00000410011 RHPN1-AS1Q9BWJ2 59 aa12.57□□□□□ -0.4
LIMS2-208ENST00000410011 IGHV3OR16-10A0A075B7F0 116 aa12.56□□□□□ -0.4
LIMS2-208ENST00000410011 J3KRW8 73 aa12.56□□□□□ -0.4
LIMS2-208ENST00000410011 DAZ1Q9NQZ3 744 aaKnown RBP12.56□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 47.6 ms