RNA–Protein interactions for RNA: ENST00000409954.6

MCF2L-210, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 5

Gene MCF2L, Length 574 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-210ENST00000409954 RPH3ALQ9UNE2 315 aa9.89□□□□□ -0.83
MCF2L-210ENST00000409954 IGHV3-16A0A0C4DH30 117 aa9.88□□□□□ -0.83
MCF2L-210ENST00000409954 K7EQM0 130 aa9.88□□□□□ -0.83
MCF2L-210ENST00000409954 MBP02144 154 aa9.88□□□□□ -0.83
MCF2L-210ENST00000409954 RAB2AP61019 212 aa9.88□□□□□ -0.83
MCF2L-210ENST00000409954 SERF2P84101 59 aa9.88□□□□□ -0.83
MCF2L-210ENST00000409954 CDPF1Q6NVV7 123 aa9.88□□□□□ -0.83
MCF2L-210ENST00000409954 NDFIP1Q9BT67 221 aa9.88□□□□□ -0.83
MCF2L-210ENST00000409954 SCRT2Q9NQ03 307 aa9.88□□□□□ -0.83
MCF2L-210ENST00000409954 TAAR5O14804 337 aa9.87□□□□□ -0.83
MCF2L-210ENST00000409954 STAG3L2P0CL84 134 aa9.87□□□□□ -0.83
MCF2L-210ENST00000409954 STAG3L3P0CL85 134 aa9.87□□□□□ -0.83
MCF2L-210ENST00000409954 DNAH10OSP0CZ25 163 aa9.87□□□□□ -0.83
MCF2L-210ENST00000409954 TIRAPP58753 221 aa9.87□□□□□ -0.83
MCF2L-210ENST00000409954 C10orf126Q8N4M7 172 aa9.87□□□□□ -0.83
MCF2L-210ENST00000409954 OR2G3Q8NGZ4 309 aa9.87□□□□□ -0.83
MCF2L-210ENST00000409954 SUN5Q8TC36 379 aa9.87□□□□□ -0.83
MCF2L-210ENST00000409954 ASB13Q8WXK3 278 aa9.87□□□□□ -0.83
MCF2L-210ENST00000409954 TVP23CQ96ET8 276 aa9.87□□□□□ -0.83
MCF2L-210ENST00000409954 TNFRSF18Q9Y5U5 241 aa9.87□□□□□ -0.83
MCF2L-210ENST00000409954 LRP1BQ9NZR2 4599 aa9.87□□□□□ -0.83
MCF2L-210ENST00000409954 FBLL1A6NHQ2 334 aaKnown RBP9.86□□□□□ -0.83
MCF2L-210ENST00000409954 EIF3GO75821 320 aaKnown RBP eCLIP9.86□□□□□ -0.83
MCF2L-210ENST00000409954 PFN1P07737 140 aaKnown RBP9.86□□□□□ -0.83
MCF2L-210ENST00000409954 CDC34P49427 236 aaPredicted RBP9.86□□□□□ -0.83
MCF2L-210ENST00000409954 C5orf17Q8NAS9 161 aa9.86□□□□□ -0.83
MCF2L-210ENST00000409954 PSMG3Q9BT73 122 aaPredicted RBP9.86□□□□□ -0.83
MCF2L-210ENST00000409954 BATF3Q9NR55 127 aa9.86□□□□□ -0.83
MCF2L-210ENST00000409954 MSRB1Q9NZV6 116 aa9.86□□□□□ -0.83
MCF2L-210ENST00000409954 TRAV8-1A0A0A6YYK1 113 aa9.85□□□□□ -0.83
MCF2L-210ENST00000409954 HMGB3O15347 200 aaKnown RBP9.85□□□□□ -0.83
MCF2L-210ENST00000409954 TYMSP04818 313 aa9.85□□□□□ -0.83
MCF2L-210ENST00000409954 ARL14EPLP0DKL9 152 aa9.85□□□□□ -0.83
MCF2L-210ENST00000409954 SUMO1P63165 101 aaKnown RBP9.85□□□□□ -0.83
MCF2L-210ENST00000409954 RAB24Q969Q5 203 aa9.85□□□□□ -0.83
MCF2L-210ENST00000409954 PTH2Q96A98 100 aa9.85□□□□□ -0.83
MCF2L-210ENST00000409954 TMEM167BQ9NRX6 74 aa9.85□□□□□ -0.83
MCF2L-210ENST00000409954 TNFSF18Q9UNG2 199 aa9.85□□□□□ -0.83
MCF2L-210ENST00000409954 A0A087WTM6 91 aa9.84□□□□□ -0.83
MCF2L-210ENST00000409954 TCRAP04437 139 aa9.84□□□□□ -0.83
MCF2L-210ENST00000409954 GATA1P15976 413 aaPredicted RBP9.84□□□□□ -0.83
MCF2L-210ENST00000409954 GNG5P63218 68 aa9.84□□□□□ -0.83
MCF2L-210ENST00000409954 ZNF876PQ49A33 203 aa9.84□□□□□ -0.83
MCF2L-210ENST00000409954 SAPCD1Q5SSQ6 148 aa9.84□□□□□ -0.83
MCF2L-210ENST00000409954 WFDC10BQ8IUB3 73 aa9.84□□□□□ -0.83
MCF2L-210ENST00000409954 HSD17B11Q8NBQ5 300 aa9.84□□□□□ -0.83
MCF2L-210ENST00000409954 AQP10Q96PS8 301 aa9.84□□□□□ -0.83
MCF2L-210ENST00000409954 ACTR3CQ9C0K3 210 aaPredicted RBP9.84□□□□□ -0.83
MCF2L-210ENST00000409954 MED28Q9H204 178 aa9.84□□□□□ -0.83
MCF2L-210ENST00000409954 EPDR1Q9UM22 224 aa9.84□□□□□ -0.83
MCF2L-210ENST00000409954 ALG5Q9Y673 324 aa9.84□□□□□ -0.83
MCF2L-210ENST00000409954 HSPG2P98160 4391 aa9.84□□□□□ -0.83
MCF2L-210ENST00000409954 TRBV6-4A0A1B0GX49 114 aa9.83□□□□□ -0.84
MCF2L-210ENST00000409954 F6UZH7 168 aa9.83□□□□□ -0.84
MCF2L-210ENST00000409954 CXorf1O96002 111 aa9.83□□□□□ -0.84
MCF2L-210ENST00000409954 CRYGDP07320 174 aa9.83□□□□□ -0.84
MCF2L-210ENST00000409954 ATP6V0CP27449 155 aa9.83□□□□□ -0.84
MCF2L-210ENST00000409954 GCHFRP30047 84 aa9.83□□□□□ -0.84
MCF2L-210ENST00000409954 NHLRC2Q8NBF2 726 aa9.83□□□□□ -0.84
MCF2L-210ENST00000409954 PRADC1Q9BSG0 188 aa9.83□□□□□ -0.84
MCF2L-210ENST00000409954 PSG8Q9UQ74 426 aa9.83□□□□□ -0.84
MCF2L-210ENST00000409954 TRAV8-6A0A0B4J262 113 aa9.82□□□□□ -0.84
MCF2L-210ENST00000409954 IGHV3-38A0A0C4DH36 116 aa9.82□□□□□ -0.84
MCF2L-210ENST00000409954 RS1O15537 224 aa9.82□□□□□ -0.84
MCF2L-210ENST00000409954 FLI1Q01543 452 aaPredicted RBP9.82□□□□□ -0.84
MCF2L-210ENST00000409954 ZFP69Q49AA0 526 aa9.82□□□□□ -0.84
MCF2L-210ENST00000409954 SMUG1Q53HV7 270 aa9.82□□□□□ -0.84
MCF2L-210ENST00000409954 SGK494Q96LW2 274 aa9.82□□□□□ -0.84
MCF2L-210ENST00000409954 SH3BGRL3Q9H299 93 aa9.82□□□□□ -0.84
MCF2L-210ENST00000409954 DNAH5Q8TE73 4624 aa9.81□□□□□ -0.84
MCF2L-210ENST00000409954 GCGP01275 180 aa9.81□□□□□ -0.84
MCF2L-210ENST00000409954 PPT1P50897 306 aa9.81□□□□□ -0.84
MCF2L-210ENST00000409954 CFAP126Q5VTH2 177 aa9.81□□□□□ -0.84
MCF2L-210ENST00000409954 SLC25A29Q8N8R3 303 aa9.81□□□□□ -0.84
MCF2L-210ENST00000409954 INO80EQ8NBZ0 244 aaPredicted RBP9.81□□□□□ -0.84
MCF2L-210ENST00000409954 LOC100131303A0A0U1RQF7 123 aa9.8□□□□□ -0.84
MCF2L-210ENST00000409954 A0A1W2PRE2 83 aa9.8□□□□□ -0.84
MCF2L-210ENST00000409954 PTTG1O95997 202 aa9.8□□□□□ -0.84
MCF2L-210ENST00000409954 IGLV2-11P01706 119 aa9.8□□□□□ -0.84
MCF2L-210ENST00000409954 ZNF80P51504 273 aaPredicted RBP9.8□□□□□ -0.84
MCF2L-210ENST00000409954 RHOHQ15669 191 aa9.8□□□□□ -0.84
MCF2L-210ENST00000409954 LINC01556Q5JQF7 62 aa9.8□□□□□ -0.84
MCF2L-210ENST00000409954 PIK3CD-AS1Q5SR53 167 aa9.8□□□□□ -0.84
MCF2L-210ENST00000409954 PRNTQ86SH4 94 aa9.8□□□□□ -0.84
MCF2L-210ENST00000409954 CYB561D1Q8N8Q1 229 aa9.8□□□□□ -0.84
MCF2L-210ENST00000409954 TMEM75Q8N9X5 138 aa9.8□□□□□ -0.84
MCF2L-210ENST00000409954 C9orf85Q96MD7 179 aa9.8□□□□□ -0.84
MCF2L-210ENST00000409954 C11orf21Q9P2W6 132 aa9.8□□□□□ -0.84
MCF2L-210ENST00000409954 BORCS7-ASMTA0A0B4J1R7 106 aa9.79□□□□□ -0.84
MCF2L-210ENST00000409954 FABP5P3A8MUU1 101 aa9.79□□□□□ -0.84
MCF2L-210ENST00000409954 IBA57-AS1B1ANH7 110 aa9.79□□□□□ -0.84
MCF2L-210ENST00000409954 EPM2AB3EWF7 344 aa9.79□□□□□ -0.84
MCF2L-210ENST00000409954 MGST1P10620 155 aaKnown RBP9.79□□□□□ -0.84
MCF2L-210ENST00000409954 NKX6-2Q9C056 277 aaPredicted RBP9.79□□□□□ -0.84
MCF2L-210ENST00000409954 ABCA13Q86UQ4 5058 aa9.78□□□□□ -0.84
MCF2L-210ENST00000409954 PGPEP1LA6NFU8 196 aa9.78□□□□□ -0.84
MCF2L-210ENST00000409954 PSCAO43653 123 aa9.78□□□□□ -0.84
MCF2L-210ENST00000409954 GIPP09681 153 aaPredicted RBP9.78□□□□□ -0.84
MCF2L-210ENST00000409954 GCSHP23434 173 aa9.78□□□□□ -0.84
MCF2L-210ENST00000409954 XGP55808 180 aa9.78□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 55.9 ms