RNA–Protein interactions for RNA: ENST00000409588.1

NIF3L1-205, Transcript of NGG1 interacting factor 3 like 1, humanhuman

TSL 1 (best) BASIC

Gene NIF3L1, Length 1,269 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIF3L1-205ENST00000409588 K7EP13 123 aa10.05□□□□□ -0.8
NIF3L1-205ENST00000409588 TAAR5O14804 337 aa10.05□□□□□ -0.8
NIF3L1-205ENST00000409588 CIDEAO60543 219 aa10.05□□□□□ -0.8
NIF3L1-205ENST00000409588 ARL14EPLP0DKL9 152 aa10.05□□□□□ -0.8
NIF3L1-205ENST00000409588 MUC21Q5SSG8 566 aa10.05□□□□□ -0.8
NIF3L1-205ENST00000409588 NKX6-2Q9C056 277 aaPredicted RBP10.05□□□□□ -0.8
NIF3L1-205ENST00000409588 MDFICQ9P1T7 246 aa10.05□□□□□ -0.8
NIF3L1-205ENST00000409588 ORM1P02763 201 aa10.04□□□□□ -0.8
NIF3L1-205ENST00000409588 TCRAP04437 139 aa10.04□□□□□ -0.8
NIF3L1-205ENST00000409588 GCHFRP30047 84 aa10.04□□□□□ -0.8
NIF3L1-205ENST00000409588 CRYBA4P53673 196 aa10.04□□□□□ -0.8
NIF3L1-205ENST00000409588 FHL2Q14192 279 aa10.04□□□□□ -0.8
NIF3L1-205ENST00000409588 TMEM183BQ1AE95 376 aa10.04□□□□□ -0.8
NIF3L1-205ENST00000409588 RGS21Q2M5E4 152 aa10.04□□□□□ -0.8
NIF3L1-205ENST00000409588 SAPCD1Q5SSQ6 148 aa10.04□□□□□ -0.8
NIF3L1-205ENST00000409588 Q6ZQT7 251 aa10.04□□□□□ -0.8
NIF3L1-205ENST00000409588 TMEM183AQ8IXX5 376 aa10.04□□□□□ -0.8
NIF3L1-205ENST00000409588 MRPL16Q9NX20 251 aaKnown RBP10.04□□□□□ -0.8
NIF3L1-205ENST00000409588 TRGV4A0A0C4DH28 118 aa10.03□□□□□ -0.8
NIF3L1-205ENST00000409588 A0A1W2PRE2 83 aa10.03□□□□□ -0.8
NIF3L1-205ENST00000409588 M0R2P5 195 aa10.03□□□□□ -0.8
NIF3L1-205ENST00000409588 NEGR1Q7Z3B1 354 aa10.03□□□□□ -0.8
NIF3L1-205ENST00000409588 SH2D6Q7Z4S9 175 aa10.03□□□□□ -0.8
NIF3L1-205ENST00000409588 OR2T35Q8NGX2 323 aa10.03□□□□□ -0.8
NIF3L1-205ENST00000409588 SDF2L1Q9HCN8 221 aa10.03□□□□□ -0.8
NIF3L1-205ENST00000409588 EPDR1Q9UM22 224 aa10.03□□□□□ -0.8
NIF3L1-205ENST00000409588 RPH3ALQ9UNE2 315 aa10.03□□□□□ -0.8
NIF3L1-205ENST00000409588 MUC4Q99102 2169 aa10.02□□□□□ -0.8
NIF3L1-205ENST00000409588 TRAV9-2A0A087WT02 112 aa10.02□□□□□ -0.81
NIF3L1-205ENST00000409588 SIVA1O15304 175 aa10.02□□□□□ -0.81
NIF3L1-205ENST00000409588 HMGB3O15347 200 aaKnown RBP10.02□□□□□ -0.81
NIF3L1-205ENST00000409588 SUMO1P63165 101 aaKnown RBP10.02□□□□□ -0.81
NIF3L1-205ENST00000409588 Q5BKY6 102 aa10.02□□□□□ -0.81
NIF3L1-205ENST00000409588 PKD1P98161 4303 aa10.02□□□□□ -0.81
NIF3L1-205ENST00000409588 TRAV4A0A0B4J268 109 aa10.01□□□□□ -0.81
NIF3L1-205ENST00000409588 IGHV3-16A0A0C4DH30 117 aa10.01□□□□□ -0.81
NIF3L1-205ENST00000409588 RNF222A6NCQ9 220 aa10.01□□□□□ -0.81
NIF3L1-205ENST00000409588 ZFP69Q49AA0 526 aa10.01□□□□□ -0.81
NIF3L1-205ENST00000409588 CYB561D1Q8N8Q1 229 aa10.01□□□□□ -0.81
NIF3L1-205ENST00000409588 PCNPQ8WW12 178 aaKnown RBP10.01□□□□□ -0.81
NIF3L1-205ENST00000409588 TVP23CQ96ET8 276 aa10.01□□□□□ -0.81
NIF3L1-205ENST00000409588 FXYD6-FXYD2A0A087WZ82 144 aa10□□□□□ -0.81
NIF3L1-205ENST00000409588 TRAV8-1A0A0A6YYK1 113 aa10□□□□□ -0.81
NIF3L1-205ENST00000409588 CTXND1A0A1B0GTU2 59 aa10□□□□□ -0.81
NIF3L1-205ENST00000409588 C9JCJ5 164 aa10□□□□□ -0.81
NIF3L1-205ENST00000409588 GNRH2O43555 120 aa10□□□□□ -0.81
NIF3L1-205ENST00000409588 EIF3GO75821 320 aaKnown RBP eCLIP10□□□□□ -0.81
NIF3L1-205ENST00000409588 IGHV3-53P01767 116 aa10□□□□□ -0.81
NIF3L1-205ENST00000409588 PFN1P07737 140 aaKnown RBP10□□□□□ -0.81
NIF3L1-205ENST00000409588 FLI1Q01543 452 aaPredicted RBP10□□□□□ -0.81
NIF3L1-205ENST00000409588 SMUG1Q53HV7 270 aa10□□□□□ -0.81
NIF3L1-205ENST00000409588 RPL7L1Q6DKI1 246 aaKnown RBP10□□□□□ -0.81
NIF3L1-205ENST00000409588 LYPD5Q6UWN5 251 aa10□□□□□ -0.81
NIF3L1-205ENST00000409588 TMEM75Q8N9X5 138 aa10□□□□□ -0.81
NIF3L1-205ENST00000409588 OR4C5Q8NGB2 326 aa10□□□□□ -0.81
NIF3L1-205ENST00000409588 PTH2Q96A98 100 aa10□□□□□ -0.81
NIF3L1-205ENST00000409588 C8orf49Q96NF6 230 aa10□□□□□ -0.81
NIF3L1-205ENST00000409588 TXNDC17Q9BRA2 123 aa10□□□□□ -0.81
NIF3L1-205ENST00000409588 NAGKQ9UJ70 344 aa10□□□□□ -0.81
NIF3L1-205ENST00000409588 PSG8Q9UQ74 426 aa10□□□□□ -0.81
NIF3L1-205ENST00000409588 PKHD1P08F94 4074 aa9.99□□□□□ -0.81
NIF3L1-205ENST00000409588 SRIP30626 198 aa9.99□□□□□ -0.81
NIF3L1-205ENST00000409588 PPT1P50897 306 aa9.99□□□□□ -0.81
NIF3L1-205ENST00000409588 GNG5P63218 68 aa9.99□□□□□ -0.81
NIF3L1-205ENST00000409588 ZNF479Q96JC4 524 aa9.99□□□□□ -0.81
NIF3L1-205ENST00000409588 SH3BGRL3Q9H299 93 aa9.99□□□□□ -0.81
NIF3L1-205ENST00000409588 K7EQD1 137 aa9.98□□□□□ -0.81
NIF3L1-205ENST00000409588 TYMSP04818 313 aa9.98□□□□□ -0.81
NIF3L1-205ENST00000409588 AKR1C8PQ5T2L2 129 aa9.98□□□□□ -0.81
NIF3L1-205ENST00000409588 NFE4Q86UQ8 179 aa9.98□□□□□ -0.81
NIF3L1-205ENST00000409588 HIST1H2BAQ96A08 127 aa9.98□□□□□ -0.81
NIF3L1-205ENST00000409588 HERC2O95714 4834 aa9.98□□□□□ -0.81
NIF3L1-205ENST00000409588 NXPH4O95158 308 aa9.97□□□□□ -0.81
NIF3L1-205ENST00000409588 GCGP01275 180 aa9.97□□□□□ -0.81
NIF3L1-205ENST00000409588 IGLV2-11P01706 119 aa9.97□□□□□ -0.81
NIF3L1-205ENST00000409588 PIK3CD-AS1Q5SR53 167 aa9.97□□□□□ -0.81
NIF3L1-205ENST00000409588 TCEAL7Q9BRU2 100 aa9.97□□□□□ -0.81
NIF3L1-205ENST00000409588 KIAA1109Q2LD37 5005 aa9.96□□□□□ -0.81
NIF3L1-205ENST00000409588 FABP5P3A8MUU1 101 aa9.96□□□□□ -0.82
NIF3L1-205ENST00000409588 GGTLC3B5MD39 225 aa9.96□□□□□ -0.82
NIF3L1-205ENST00000409588 F6UZH7 168 aa9.96□□□□□ -0.82
NIF3L1-205ENST00000409588 IFNA7P01567 189 aa9.96□□□□□ -0.82
NIF3L1-205ENST00000409588 SFTA3P0C7M3 94 aa9.96□□□□□ -0.82
NIF3L1-205ENST00000409588 GYPEP15421 78 aa9.96□□□□□ -0.82
NIF3L1-205ENST00000409588 TIRAPP58753 221 aa9.96□□□□□ -0.82
NIF3L1-205ENST00000409588 ZNF876PQ49A33 203 aa9.96□□□□□ -0.82
NIF3L1-205ENST00000409588 PRNTQ86SH4 94 aa9.96□□□□□ -0.82
NIF3L1-205ENST00000409588 STOML3Q8TAV4 291 aa9.96□□□□□ -0.82
NIF3L1-205ENST00000409588 C16orf90A8MZG2 172 aa9.95□□□□□ -0.82
NIF3L1-205ENST00000409588 FHITP49789 147 aa9.95□□□□□ -0.82
NIF3L1-205ENST00000409588 SGK494Q96LW2 274 aa9.95□□□□□ -0.82
NIF3L1-205ENST00000409588 KRTAP1-5Q9BYS1 174 aa9.95□□□□□ -0.82
NIF3L1-205ENST00000409588 ZFP30Q9Y2G7 519 aa9.95□□□□□ -0.82
NIF3L1-205ENST00000409588 LY96Q9Y6Y9 160 aa9.95□□□□□ -0.82
NIF3L1-205ENST00000409588 TRBV6-4A0A1B0GX49 114 aa9.94□□□□□ -0.82
NIF3L1-205ENST00000409588 ARPC5O15511 151 aa9.94□□□□□ -0.82
NIF3L1-205ENST00000409588 CDK2AP2O75956 126 aa9.94□□□□□ -0.82
NIF3L1-205ENST00000409588 GATA1P15976 413 aaPredicted RBP9.94□□□□□ -0.82
NIF3L1-205ENST00000409588 EVI2AP22794 236 aa9.94□□□□□ -0.82
NIF3L1-205ENST00000409588 ZNF80P51504 273 aaPredicted RBP9.94□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 75.5 ms