RNA–Protein interactions for RNA: ENST00000399903.6

PTPRA-205, Transcript of protein tyrosine phosphatase, receptor type A, humanhuman

TSL 5 BASIC

Gene PTPRA, Length 3,337 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRA-205ENST00000399903 LINC00574Q9H8X3 128 aa13.25□□□□□ -0.29
PTPRA-205ENST00000399903 KLHL30-AS1Q8NEE0 82 aa13.24□□□□□ -0.29
PTPRA-205ENST00000399903 ACACBO00763 2458 aa13.24□□□□□ -0.29
PTPRA-205ENST00000399903 MYMXA0A1B0GTQ4 84 aa13.24□□□□□ -0.29
PTPRA-205ENST00000399903 KLRD1Q13241 179 aa13.24□□□□□ -0.29
PTPRA-205ENST00000399903 TMEM30BQ3MIR4 351 aa13.24□□□□□ -0.29
PTPRA-205ENST00000399903 TEX36Q5VZQ5 186 aa13.24□□□□□ -0.29
PTPRA-205ENST00000399903 ONECUT1Q9UBC0 465 aa13.24□□□□□ -0.29
PTPRA-205ENST00000399903 K7EIM0 57 aa13.24□□□□□ -0.29
PTPRA-205ENST00000399903 IGHV1-8P0DP01 117 aa13.24□□□□□ -0.29
PTPRA-205ENST00000399903 SPANXN1Q5VSR9 72 aa13.24□□□□□ -0.29
PTPRA-205ENST00000399903 ZFHX3Q15911 3703 aa13.23□□□□□ -0.29
PTPRA-205ENST00000399903 TMEM78Q5T7P6 136 aa13.23□□□□□ -0.29
PTPRA-205ENST00000399903 SCGB3A1Q96QR1 104 aa13.23□□□□□ -0.29
PTPRA-205ENST00000399903 CFAP161Q6P656 301 aa13.23□□□□□ -0.29
PTPRA-205ENST00000399903 IGHV1-3A0A0C4DH29 117 aa13.23□□□□□ -0.29
PTPRA-205ENST00000399903 FABP5P3A8MUU1 101 aa13.23□□□□□ -0.29
PTPRA-205ENST00000399903 CD3EP07766 207 aa13.23□□□□□ -0.29
PTPRA-205ENST00000399903 CFAP126Q5VTH2 177 aa13.23□□□□□ -0.29
PTPRA-205ENST00000399903 LYPD1Q8N2G4 141 aa13.23□□□□□ -0.29
PTPRA-205ENST00000399903 TEX29Q8N6K0 151 aa13.23□□□□□ -0.29
PTPRA-205ENST00000399903 Q8N8P6 123 aa13.23□□□□□ -0.29
PTPRA-205ENST00000399903 A0A087WX48 190 aa13.22□□□□□ -0.29
PTPRA-205ENST00000399903 IL17RELQ6ZVW7 336 aa13.22□□□□□ -0.29
PTPRA-205ENST00000399903 CENPEQ02224 2701 aa13.22□□□□□ -0.29
PTPRA-205ENST00000399903 TRBV7-3A0A075B6L6 115 aa13.21□□□□□ -0.29
PTPRA-205ENST00000399903 TRBV6-1A0A0K0K1D8 114 aa13.21□□□□□ -0.29
PTPRA-205ENST00000399903 PRAC2D3DTV9 90 aa13.21□□□□□ -0.29
PTPRA-205ENST00000399903 SLC25A16P16260 332 aa13.21□□□□□ -0.29
PTPRA-205ENST00000399903 LOXP28300 417 aaPredicted RBP13.21□□□□□ -0.29
PTPRA-205ENST00000399903 SRSF1Q07955 248 aaKnown RBP eCLIP13.21□□□□□ -0.29
PTPRA-205ENST00000399903 C1orf122Q6ZSJ8 110 aa13.21□□□□□ -0.29
PTPRA-205ENST00000399903 PLEKHB2Q96CS7 222 aa13.21□□□□□ -0.29
PTPRA-205ENST00000399903 MSRB2Q9Y3D2 182 aa13.21□□□□□ -0.29
PTPRA-205ENST00000399903 ZFAND6Q6FIF0 208 aa13.21□□□□□ -0.29
PTPRA-205ENST00000399903 Q6ZQT7 251 aa13.21□□□□□ -0.29
PTPRA-205ENST00000399903 CFHR4Q92496 578 aa13.21□□□□□ -0.29
PTPRA-205ENST00000399903 PRADC1Q9BSG0 188 aa13.21□□□□□ -0.29
PTPRA-205ENST00000399903 IGLC6P0CF74 106 aa13.21□□□□□ -0.3
PTPRA-205ENST00000399903 LGALS1P09382 135 aaKnown RBP13.2□□□□□ -0.3
PTPRA-205ENST00000399903 DYNAPQ8N1N2 210 aa13.2□□□□□ -0.3
PTPRA-205ENST00000399903 TAL2Q16559 108 aa13.2□□□□□ -0.3
PTPRA-205ENST00000399903 ERG28Q9UKR5 140 aa13.2□□□□□ -0.3
PTPRA-205ENST00000399903 TRAV8-2A0A0B4J237 113 aa13.19□□□□□ -0.3
PTPRA-205ENST00000399903 VSTM5A8MXK1 200 aa13.19□□□□□ -0.3
PTPRA-205ENST00000399903 PLNP26678 52 aa13.19□□□□□ -0.3
PTPRA-205ENST00000399903 PVRIGQ6DKI7 326 aa13.19□□□□□ -0.3
PTPRA-205ENST00000399903 PIFOQ8TCI5 191 aa13.19□□□□□ -0.3
PTPRA-205ENST00000399903 CARD19Q96LW7 228 aa13.19□□□□□ -0.3
PTPRA-205ENST00000399903 CFAP46Q8IYW2 2715 aa13.19□□□□□ -0.3
PTPRA-205ENST00000399903 CRYBG3Q68DQ2 2970 aa13.19□□□□□ -0.3
PTPRA-205ENST00000399903 H7C1H1 209 aa13.19□□□□□ -0.3
PTPRA-205ENST00000399903 TSPAN13O95857 204 aa13.19□□□□□ -0.3
PTPRA-205ENST00000399903 PSMG4Q5JS54 123 aa13.19□□□□□ -0.3
PTPRA-205ENST00000399903 PPDPFLQ8WWR9 84 aa13.19□□□□□ -0.3
PTPRA-205ENST00000399903 RAX2Q96IS3 184 aa13.19□□□□□ -0.3
PTPRA-205ENST00000399903 FLNCQ14315 2725 aa13.19□□□□□ -0.3
PTPRA-205ENST00000399903 A6NJY4 79 aa13.18□□□□□ -0.3
PTPRA-205ENST00000399903 M0R381 172 aa13.18□□□□□ -0.3
PTPRA-205ENST00000399903 A8MWV9 139 aa13.18□□□□□ -0.3
PTPRA-205ENST00000399903 F8VRH5 84 aa13.18□□□□□ -0.3
PTPRA-205ENST00000399903 RPL7P18124 248 aaKnown RBP13.18□□□□□ -0.3
PTPRA-205ENST00000399903 MRPS12O15235 138 aaKnown RBP13.18□□□□□ -0.3
PTPRA-205ENST00000399903 TIMM23O14925 209 aa13.17□□□□□ -0.3
PTPRA-205ENST00000399903 TCL1BO95988 128 aa13.17□□□□□ -0.3
PTPRA-205ENST00000399903 MGPP08493 103 aa13.17□□□□□ -0.3
PTPRA-205ENST00000399903 GAGE5Q13069 117 aa13.17□□□□□ -0.3
PTPRA-205ENST00000399903 GAGE6Q13070 117 aa13.17□□□□□ -0.3
PTPRA-205ENST00000399903 UTP20O75691 2785 aaKnown RBP13.17□□□□□ -0.3
PTPRA-205ENST00000399903 MYO18BQ8IUG5 2567 aa13.17□□□□□ -0.3
PTPRA-205ENST00000399903 BEX4Q9NWD9 120 aaPredicted RBP13.17□□□□□ -0.3
PTPRA-205ENST00000399903 ANKRD29Q8N6D5 301 aa13.16□□□□□ -0.3
PTPRA-205ENST00000399903 MFAP4P55083 255 aa13.16□□□□□ -0.3
PTPRA-205ENST00000399903 ADORA2A-AS1P86434 159 aa13.16□□□□□ -0.3
PTPRA-205ENST00000399903 SMIM20Q8N5G0 67 aa13.16□□□□□ -0.3
PTPRA-205ENST00000399903 TEN1Q86WV5 123 aa13.16□□□□□ -0.3
PTPRA-205ENST00000399903 TMEM155Q4W5P6 130 aa13.15□□□□□ -0.3
PTPRA-205ENST00000399903 ZNF688P0C7X2 276 aa13.15□□□□□ -0.3
PTPRA-205ENST00000399903 LINC00311Q8N616 119 aa13.15□□□□□ -0.3
PTPRA-205ENST00000399903 C3orf56Q8N813 242 aa13.15□□□□□ -0.3
PTPRA-205ENST00000399903 C9JAW5 83 aa13.15□□□□□ -0.31
PTPRA-205ENST00000399903 PDE6HQ13956 83 aa13.15□□□□□ -0.31
PTPRA-205ENST00000399903 BUB1B-PAK6H3BSN5 160 aa13.14□□□□□ -0.31
PTPRA-205ENST00000399903 SCGB2A1O75556 95 aa13.14□□□□□ -0.31
PTPRA-205ENST00000399903 C21orf62Q9NYP8 219 aa13.14□□□□□ -0.31
PTPRA-205ENST00000399903 C11orf21Q9P2W6 132 aa13.14□□□□□ -0.31
PTPRA-205ENST00000399903 FAM208BQ5VWN6 2430 aa13.14□□□□□ -0.31
PTPRA-205ENST00000399903 CRYGBP07316 175 aa13.14□□□□□ -0.31
PTPRA-205ENST00000399903 Q1RN00 199 aa13.14□□□□□ -0.31
PTPRA-205ENST00000399903 TTC32Q5I0X7 151 aa13.14□□□□□ -0.31
PTPRA-205ENST00000399903 CSMD2Q7Z408 3487 aa13.13□□□□□ -0.31
PTPRA-205ENST00000399903 IGKV3D-20A0A0C4DH25 116 aa13.13□□□□□ -0.31
PTPRA-205ENST00000399903 B9A039 149 aa13.13□□□□□ -0.31
PTPRA-205ENST00000399903 SNCGO76070 127 aa13.13□□□□□ -0.31
PTPRA-205ENST00000399903 HERV-K104P63124 156 aa13.13□□□□□ -0.31
PTPRA-205ENST00000399903 GAGE2BQ13066 116 aa13.13□□□□□ -0.31
PTPRA-205ENST00000399903 ZNF672Q499Z4 452 aaPredicted RBP13.13□□□□□ -0.31
PTPRA-205ENST00000399903 GAGE2EQ4V326 116 aa13.13□□□□□ -0.31
PTPRA-205ENST00000399903 RPL39LQ96EH5 51 aaKnown RBP13.13□□□□□ -0.31
PTPRA-205ENST00000399903 GAGE2DQ9UEU5 116 aa13.13□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 83 ms