RNA–Protein interactions for RNA: ENST00000399026.1

BRCC3-205, Transcript of BRCA1/BRCA2-containing complex subunit 3, humanhuman

TSL 5

Gene BRCC3, Length 456 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCC3-205ENST00000399026 DEFB131BA0A096LNP1 70 aa5.93□□□□□ -1.46
BRCC3-205ENST00000399026 TRBV7-9A0A0J9YWB2 115 aa5.93□□□□□ -1.46
BRCC3-205ENST00000399026 TEX48A0A1B0GUV7 120 aa5.93□□□□□ -1.46
BRCC3-205ENST00000399026 SERTM2A0A1B0GWG4 89 aa5.93□□□□□ -1.46
BRCC3-205ENST00000399026 SNURFLB1AK76 121 aa5.93□□□□□ -1.46
BRCC3-205ENST00000399026 IGLL5B9A064 214 aa5.93□□□□□ -1.46
BRCC3-205ENST00000399026 C11orf94C9JXX5 98 aa5.93□□□□□ -1.46
BRCC3-205ENST00000399026 NMBP08949 121 aa5.93□□□□□ -1.46
BRCC3-205ENST00000399026 SULT1A2P50226 295 aa5.93□□□□□ -1.46
BRCC3-205ENST00000399026 CCL20P78556 96 aa5.93□□□□□ -1.46
BRCC3-205ENST00000399026 Q6AWC8 147 aa5.93□□□□□ -1.46
BRCC3-205ENST00000399026 EIF5AL1Q6IS14 154 aaKnown RBP5.93□□□□□ -1.46
BRCC3-205ENST00000399026 ALKAL2Q6UX46 152 aa5.93□□□□□ -1.46
BRCC3-205ENST00000399026 CCDC28AQ8IWP9 274 aa5.93□□□□□ -1.46
BRCC3-205ENST00000399026 EIF4E3Q8N5X7 224 aaKnown RBP5.93□□□□□ -1.46
BRCC3-205ENST00000399026 ARL6IP6Q8N6S5 226 aa5.93□□□□□ -1.46
BRCC3-205ENST00000399026 C11orf72Q8NBR9 251 aa5.93□□□□□ -1.46
BRCC3-205ENST00000399026 C2CD4CQ8TF44 421 aa5.93□□□□□ -1.46
BRCC3-205ENST00000399026 NDFIP1Q9BT67 221 aa5.93□□□□□ -1.46
BRCC3-205ENST00000399026 TREM1Q9NP99 234 aa5.93□□□□□ -1.46
BRCC3-205ENST00000399026 GSN-AS1Q9NRJ2 163 aa5.93□□□□□ -1.46
BRCC3-205ENST00000399026 KLK5Q9Y337 293 aaPredicted RBP5.93□□□□□ -1.46
BRCC3-205ENST00000399026 LENEPQ9Y5L5 61 aa5.93□□□□□ -1.46
BRCC3-205ENST00000399026 ARL2-SNX15V9GYD0 113 aa5.93□□□□□ -1.46
BRCC3-205ENST00000399026 VPS13DQ5THJ4 4388 aa5.92□□□□□ -1.46
BRCC3-205ENST00000399026 IGHV4-4A0A075B6R2 117 aa5.92□□□□□ -1.46
BRCC3-205ENST00000399026 LCE6AA0A183 80 aa5.92□□□□□ -1.46
BRCC3-205ENST00000399026 LYRM9A8MSI8 78 aa5.92□□□□□ -1.46
BRCC3-205ENST00000399026 AKR1C3P42330 323 aa5.92□□□□□ -1.46
BRCC3-205ENST00000399026 RAB5CP51148 216 aa5.92□□□□□ -1.46
BRCC3-205ENST00000399026 ZNF80P51504 273 aaPredicted RBP5.92□□□□□ -1.46
BRCC3-205ENST00000399026 TMEM183BQ1AE95 376 aa5.92□□□□□ -1.46
BRCC3-205ENST00000399026 ZNF493Q6ZR52 646 aa5.92□□□□□ -1.46
BRCC3-205ENST00000399026 Q6ZTI0 123 aa5.92□□□□□ -1.46
BRCC3-205ENST00000399026 TMEM183AQ8IXX5 376 aa5.92□□□□□ -1.46
BRCC3-205ENST00000399026 ZNF680Q8NEM1 530 aa5.92□□□□□ -1.46
BRCC3-205ENST00000399026 GNG13Q9P2W3 67 aa5.92□□□□□ -1.46
BRCC3-205ENST00000399026 KLF12Q9Y4X4 402 aa5.92□□□□□ -1.46
BRCC3-205ENST00000399026 TIMM8BQ9Y5J9 83 aaPredicted RBP5.92□□□□□ -1.46
BRCC3-205ENST00000399026 GAGE12BA1L429 117 aa5.91□□□□□ -1.46
BRCC3-205ENST00000399026 GAGE7O76087 117 aa5.91□□□□□ -1.46
BRCC3-205ENST00000399026 GCGP01275 180 aa5.91□□□□□ -1.46
BRCC3-205ENST00000399026 TYMSP04818 313 aa5.91□□□□□ -1.46
BRCC3-205ENST00000399026 GAGE12FP0CL80 117 aa5.91□□□□□ -1.46
BRCC3-205ENST00000399026 GAGE12GP0CL81 117 aa5.91□□□□□ -1.46
BRCC3-205ENST00000399026 GAGE12IP0CL82 117 aa5.91□□□□□ -1.46
BRCC3-205ENST00000399026 PPT1P50897 306 aa5.91□□□□□ -1.46
BRCC3-205ENST00000399026 TCL1AP56279 114 aa5.91□□□□□ -1.46
BRCC3-205ENST00000399026 UBE2G1P62253 170 aa5.91□□□□□ -1.46
BRCC3-205ENST00000399026 ZNF415Q09FC8 603 aa5.91□□□□□ -1.46
BRCC3-205ENST00000399026 ANXA2RQ3ZCQ2 193 aa5.91□□□□□ -1.46
BRCC3-205ENST00000399026 NHLRC2Q8NBF2 726 aa5.91□□□□□ -1.46
BRCC3-205ENST00000399026 LINC00476Q8WZB0 136 aa5.91□□□□□ -1.46
BRCC3-205ENST00000399026 HIST1H2BAQ96A08 127 aa5.91□□□□□ -1.46
BRCC3-205ENST00000399026 LINC00467Q9BRT7 94 aa5.91□□□□□ -1.46
BRCC3-205ENST00000399026 NKX6-2Q9C056 277 aaPredicted RBP5.91□□□□□ -1.46
BRCC3-205ENST00000399026 MANBALQ9NQG1 85 aa5.91□□□□□ -1.46
BRCC3-205ENST00000399026 MRPL16Q9NX20 251 aaKnown RBP5.91□□□□□ -1.46
BRCC3-205ENST00000399026 C11orf21Q9P2W6 132 aa5.91□□□□□ -1.46
BRCC3-205ENST00000399026 TRGV1A0A0A0MS02 117 aa5.9□□□□□ -1.46
BRCC3-205ENST00000399026 TRAV21A0A0B4J279 112 aa5.9□□□□□ -1.46
BRCC3-205ENST00000399026 LY6G6CO95867 125 aa5.9□□□□□ -1.46
BRCC3-205ENST00000399026 SMUG1Q53HV7 270 aa5.9□□□□□ -1.46
BRCC3-205ENST00000399026 FAM159AQ6UWV7 190 aa5.9□□□□□ -1.46
BRCC3-205ENST00000399026 ZC2HC1AQ96GY0 325 aa5.9□□□□□ -1.46
BRCC3-205ENST00000399026 FMC1Q96HJ9 113 aa5.9□□□□□ -1.46
BRCC3-205ENST00000399026 MDFICQ9P1T7 246 aa5.9□□□□□ -1.46
BRCC3-205ENST00000399026 DNAH6Q9C0G6 4158 aa5.89□□□□□ -1.47
BRCC3-205ENST00000399026 TRGV11A0A075B6L2 103 aa5.89□□□□□ -1.47
BRCC3-205ENST00000399026 TRAV1-1A0A0B4J248 108 aa5.89□□□□□ -1.47
BRCC3-205ENST00000399026 F5H768 121 aa5.89□□□□□ -1.47
BRCC3-205ENST00000399026 TEX46H3BTG2 121 aa5.89□□□□□ -1.47
BRCC3-205ENST00000399026 GNRH2O43555 120 aa5.89□□□□□ -1.47
BRCC3-205ENST00000399026 LTAP01374 205 aa5.89□□□□□ -1.47
BRCC3-205ENST00000399026 ATP5G1P05496 136 aa5.89□□□□□ -1.47
BRCC3-205ENST00000399026 PFN1P07737 140 aaKnown RBP5.89□□□□□ -1.47
BRCC3-205ENST00000399026 BCL2P10415 239 aa5.89□□□□□ -1.47
BRCC3-205ENST00000399026 IBA57Q5T440 356 aaKnown RBP5.89□□□□□ -1.47
BRCC3-205ENST00000399026 TMEM88Q6PEY1 159 aa5.89□□□□□ -1.47
BRCC3-205ENST00000399026 LINC00612Q8N6U2 182 aa5.89□□□□□ -1.47
BRCC3-205ENST00000399026 TCEAL7Q9BRU2 100 aa5.89□□□□□ -1.47
BRCC3-205ENST00000399026 DERL1Q9BUN8 251 aa5.89□□□□□ -1.47
BRCC3-205ENST00000399026 SDF2L1Q9HCN8 221 aa5.89□□□□□ -1.47
BRCC3-205ENST00000399026 APLNQ9ULZ1 77 aa5.89□□□□□ -1.47
BRCC3-205ENST00000399026 TRGV2A0A075B6R0 118 aa5.88□□□□□ -1.47
BRCC3-205ENST00000399026 IGHV3-16A0A0C4DH30 117 aa5.88□□□□□ -1.47
BRCC3-205ENST00000399026 FBLL1A6NHQ2 334 aaKnown RBP5.88□□□□□ -1.47
BRCC3-205ENST00000399026 M0R036 132 aa5.88□□□□□ -1.47
BRCC3-205ENST00000399026 SPINK4O60575 86 aa5.88□□□□□ -1.47
BRCC3-205ENST00000399026 SH2D1AO60880 128 aa5.88□□□□□ -1.47
BRCC3-205ENST00000399026 IFNA1P01562 189 aa5.88□□□□□ -1.47
BRCC3-205ENST00000399026 IGHV3-53P01767 116 aa5.88□□□□□ -1.47
BRCC3-205ENST00000399026 DAZ2Q13117 558 aaKnown RBP5.88□□□□□ -1.47
BRCC3-205ENST00000399026 TDRG1Q3Y452 100 aa5.88□□□□□ -1.47
BRCC3-205ENST00000399026 SAPCD1Q5SSQ6 148 aa5.88□□□□□ -1.47
BRCC3-205ENST00000399026 PCNPQ8WW12 178 aaKnown RBP5.88□□□□□ -1.47
BRCC3-205ENST00000399026 NDUFAF3Q9BU61 184 aa5.88□□□□□ -1.47
BRCC3-205ENST00000399026 A0A0J9YY99 117 aa5.87□□□□□ -1.47
BRCC3-205ENST00000399026 RPL35P42766 123 aaKnown RBP5.87□□□□□ -1.47
BRCC3-205ENST00000399026 MEF2BQ02080 365 aaPredicted RBP5.87□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 104 ms